Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00514 ATGGGCGCAGGATCTCGGGCTAGTTATCTTCTCCACGAAGTTGAAATGGACCACAAAGGGCTAGAAAGCATTAGAGCAACAAAACCCTTCATTGCTATGTCCATTTCTATTTTTGTCAAATGCTTAACTGGGCAGAACCCGAATCACTTTTCTTCTTTCACTTTTTTGGAGATGAACAGAGCCTTGCCGGAGATGCTCCACTGCTTCACTGCCCCAGGAAATTGCGCCGACATGACTGTCTTGGAGAGGCAGACCGCACGTCTCAAATGGCACCAAGACCAGCTTCACCACCACAATCTCCACAGCTACTTTTCCCACTCTTTTCCGGCGCCAATTCAGCCTGATTATGTCCCTGACTCGTTTATCGTCTCCCGGGAAACAGAGTTCGGAGAGGTTGTGCTTGGGTCGGTCAAGCCCGACCCAGGTTTGGAAAATGGGTGGCCGGAGTTGGGCAAGTTTGAGACTCCGACCATGGATTTTGGGTCTGGACTGGAACTCGATCCTTCCATTTCAAGAACTTCAGGCAGTCCACCAGCGATGATGGAAGCGAAGAACATAGAATCTATTTTGTCTGAGAAACTTAACTCTCCCGTGGGAAGAGAAAGCTTTAAGAAAAGAAAGACGAACACAAAGATTATTAGCGAAGAAGATACGAAAGAAAAAAGGATCAAATTATGTGCAGAAGAAGGAGAATCAAAGGTTACAGACCAAATCCAGACAAAAAACAACTCCGCTGCCACCACAGCCAACAGAGAAACCTCTGCAGATACATCGAAGGAGAATTCAAAAGCTTCGGAGGTTCAAAAACCAGATTACATTCACGTTCGAGCTCGTCGAGGCCAAGCCACAGACAGCCATAGCCTCGCTGAAAGAGCCAGAAGAGAAAAAATTAGCGAGAGAATGAAGTATCTGCAAGATTTAGTACCAGGATGTAATAAAATTACAGGAAAAGCTGGAATGCTGGACGAAATTATCAACTATGTTCAATCTCTGCAAAGACAAGTTGAGTTCTTGTCAATGAAATTAGCTGCTGTGAACCCACGTCTTGAATTCAATCTGAACGTCGATGACATCTTTCCCAAAGAGGCACATCCTACATCCAATTTTCCGTCGGTAGGAATACAGTCAGAGCTCAACAGCCCTGCCTATCTCCACTTTGATCAATCCCATCAAATGGGTTCGTATTGCGGGTTGGATCCATCCGTCACGGCGCTTCGCCGGACAATCAGCGCTCCTGTTTCGATCCCGGAAAATTTTCTAGAGTCCGCCTGCTTTCCGCCCTCTTCAGCTTGGGTTGGAGATTTGCAGAGCCTGTATAACGTGGGATTTGATCAAGGAAGAACGGAAGCCTTTCCATCTCATCCATATGCAGGCTTCTACATTGTTTCCTATGGTCTTGGAATTTATCTGCTGAATTTGCTGATTGGTTTTCTATCACCTTTGGTTGATCCGGAAATGGAGGTTTCTCCTGGGCCTTTGCTGCCAACCAAAGGTTCCGATGAATTCAAGCCATTCATCCGGAGACTTCCTGAGTTTAAATTCTGGTACTCCTTTACTAAGGCGTTCTGCATTGCCTTTGTCATGACCTTCTTTTCAGTATTTGATGTCCCTGTCTTCTGGCCCATACTACTCTGTTACTGGATTGTTCTGTTTGTTCTTACAATGAGGCGACAAATCTCACACATGATGAAACACAAGTACATCCCCTTAAACATCGGAAAGCAGAATAATGATGGTGAAAAAACCTCAATGCATTCTTCCCAATCTATTTGGATTGCTCATTGGATGACCCCATTCTGCGAATCTGCAAACCTATTATGTAGCGGCTTACTACCTAATTACGAACTTAGCGAGGGGACTAATGGAGCTAAGGAGTATGATTTTTGTGATTTGCAAGAGGTTTTGCATGAAATTTCCAGTTGTGCCAAAAGATCTGGACAAGAATGTGAACGCAGAACATATAATATGGTCAAGGATAGTTCATCGGGGAGTTGTAAAATTGACAGGGAAGAAATGATGGATTTCCAGCCTTTTCCAATGTTTAGTCTATCTAAAAAAAGAAAAAGTAGTTTAACTCAGAATAATGACCAAGCTACCTCTGGTCATATCAGAGCACTTAGATCCCGATTCCATTACAGGTCTGAGCATCCCAAATCTATTCTTGCAGGGCTCCTGACAAAGCAAGGTAAAATGCTTCATTTTTCTTCTGTTTTCAGTGCAGTAGTATTATCTATTTTGGAGTTGAAAAGGAGCCAGCTGTTACTATCTCAAGCTGCAATTGCTTCCACTCTGAAGAAGACGGGAGAGAGAGCGATGAAAACTGTATTGCCTGGTAAAAACCACAATTTTCATCATCTTCTTACATCAAGTTCAAAAGAAAACCGTACGAAGATTCAGTCAATGACCCAGAGCTTGGATGATGTCCGTTTCCATGCTGATCTGAACCGCACAAAATCAATTACTTGCACATATGACTCTTTTGAACAATTGCTGAGCAGCCAATGGATTGGTCGCTTCAAGATAAATTCTTCTAAGTTTGCTAACTTTACACCAAAATCAAGAAAGGGGGAAGCTACTTCTAATGAAATGACCGATGAATTCATCAGCAAAATTATGAATAGTACAAGTTCGGAACCCACAGGTGAACACCATCAATATGTACTAATGACATTCAATCAAACTGCAAAGACATCTGAGAAGAAAGTCTCTTGCAGCGAAATGGAGAGACAAATTCAAGAAACAGCATTTTCAGACCCCTGGATTAGCAGGTGGCGTGTTAGCAGAGATGCTTTCCTTCTGAAGAAACCCAAAGCAACGTCAGTTTGTGATCCTCAGTCTTCAAAGCTACTTCTTGATCAGACACAAATAGAACAGTTTTCAAGGATTGCTTCTATGGCATTGATGGGAAAGACCTTGACCCGAAAGCACACGTCGTTGAAACGGGAAGCCACTCGAGTTTGGAATATGGAAGGGTTTTGA 2979 43.27 MGAGSRASYLLHEVEMDHKGLESIRATKPFIAMSISIFVKCLTGQNPNHFSSFTFLEMNRALPEMLHCFTAPGNCADMTVLERQTARLKWHQDQLHHHNLHSYFSHSFPAPIQPDYVPDSFIVSRETEFGEVVLGSVKPDPGLENGWPELGKFETPTMDFGSGLELDPSISRTSGSPPAMMEAKNIESILSEKLNSPVGRESFKKRKTNTKIISEEDTKEKRIKLCAEEGESKVTDQIQTKNNSAATTANRETSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNLNVDDIFPKEAHPTSNFPSVGIQSELNSPAYLHFDQSHQMGSYCGLDPSVTALRRTISAPVSIPENFLESACFPPSSAWVGDLQSLYNVGFDQGRTEAFPSHPYAGFYIVSYGLGIYLLNLLIGFLSPLVDPEMEVSPGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQISHMMKHKYIPLNIGKQNNDGEKTSMHSSQSIWIAHWMTPFCESANLLCSGLLPNYELSEGTNGAKEYDFCDLQEVLHEISSCAKRSGQECERRTYNMVKDSSSGSCKIDREEMMDFQPFPMFSLSKKRKSSLTQNNDQATSGHIRALRSRFHYRSEHPKSILAGLLTKQGKMLHFSSVFSAVVLSILELKRSQLLLSQAAIASTLKKTGERAMKTVLPGKNHNFHHLLTSSSKENRTKIQSMTQSLDDVRFHADLNRTKSITCTYDSFEQLLSSQWIGRFKINSSKFANFTPKSRKGEATSNEMTDEFISKIMNSTSSEPTGEHHQYVLMTFNQTAKTSEKKVSCSEMERQIQETAFSDPWISRWRVSRDAFLLKKPKATSVCDPQSSKLLLDQTQIEQFSRIASMALMGKTLTRKHTSLKREATRVWNMEGF 992
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 4377456 4390429 + BLOR13426 Blo04g00514 59542
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00514 992 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 279 350 IPR036638 GO:0046983
Blo04g00514 992 SMART finulus 287 337 IPR011598 GO:0046983
Blo04g00514 992 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 77 450 - -
Blo04g00514 992 MobiDBLite consensus disorder prediction 256 292 - -
Blo04g00514 992 MobiDBLite consensus disorder prediction 236 255 - -
Blo04g00514 992 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 281 331 IPR011598 GO:0046983
Blo04g00514 992 MobiDBLite consensus disorder prediction 231 292 - -
Blo04g00514 992 CDD bHLH_AtBPE_like 271 354 - -
Blo04g00514 992 Gene3D - 278 354 IPR036638 GO:0046983
Blo04g00514 992 Pfam Rer1 family 457 576 IPR004932 GO:0016021
Blo04g00514 992 Pfam Helix-loop-helix DNA-binding domain 285 332 IPR011598 GO:0046983
Blo04g00514 992 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 77 450 IPR024097 GO:0006355
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Blo04g00514 Blo15g00705 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00804 Blo-Chr2:27792248 Blo04g00514 Blo-Chr4:4377456 8.75E-135 dispersed
Blo04g00514 Blo-Chr4:4377456 Blo15g00700 Blo-Chr15:22161819 1.30E-116 dispersed
Blo12g00154 Blo-Chr12:10470222 Blo04g00514 Blo-Chr4:4377456 1.48E-37 dispersed
Blo13g00550 Blo-Chr13:27394887 Blo04g00514 Blo-Chr4:4377456 0 transposed
Blo15g00705 Blo-Chr15:22416807 Blo04g00514 Blo-Chr4:4377456 3.95E-16 transposed
Blo13g00549 Blo-Chr13:27385793 Blo04g00514 Blo-Chr4:4377456 1.87E-75 wgd
Blo17g00791 Blo-Chr17:25279139 Blo04g00514 Blo-Chr4:4377456 3.64E-69 wgd
Blo18g00810 Blo-Chr18:23881782 Blo04g00514 Blo-Chr4:4377456 1.38E-63 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12264 PF03248 Rer1 2.00E-55 No_clan Blo TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00514 - - jre:109013802 466.077