Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo04g00514 | ATGGGCGCAGGATCTCGGGCTAGTTATCTTCTCCACGAAGTTGAAATGGACCACAAAGGGCTAGAAAGCATTAGAGCAACAAAACCCTTCATTGCTATGTCCATTTCTATTTTTGTCAAATGCTTAACTGGGCAGAACCCGAATCACTTTTCTTCTTTCACTTTTTTGGAGATGAACAGAGCCTTGCCGGAGATGCTCCACTGCTTCACTGCCCCAGGAAATTGCGCCGACATGACTGTCTTGGAGAGGCAGACCGCACGTCTCAAATGGCACCAAGACCAGCTTCACCACCACAATCTCCACAGCTACTTTTCCCACTCTTTTCCGGCGCCAATTCAGCCTGATTATGTCCCTGACTCGTTTATCGTCTCCCGGGAAACAGAGTTCGGAGAGGTTGTGCTTGGGTCGGTCAAGCCCGACCCAGGTTTGGAAAATGGGTGGCCGGAGTTGGGCAAGTTTGAGACTCCGACCATGGATTTTGGGTCTGGACTGGAACTCGATCCTTCCATTTCAAGAACTTCAGGCAGTCCACCAGCGATGATGGAAGCGAAGAACATAGAATCTATTTTGTCTGAGAAACTTAACTCTCCCGTGGGAAGAGAAAGCTTTAAGAAAAGAAAGACGAACACAAAGATTATTAGCGAAGAAGATACGAAAGAAAAAAGGATCAAATTATGTGCAGAAGAAGGAGAATCAAAGGTTACAGACCAAATCCAGACAAAAAACAACTCCGCTGCCACCACAGCCAACAGAGAAACCTCTGCAGATACATCGAAGGAGAATTCAAAAGCTTCGGAGGTTCAAAAACCAGATTACATTCACGTTCGAGCTCGTCGAGGCCAAGCCACAGACAGCCATAGCCTCGCTGAAAGAGCCAGAAGAGAAAAAATTAGCGAGAGAATGAAGTATCTGCAAGATTTAGTACCAGGATGTAATAAAATTACAGGAAAAGCTGGAATGCTGGACGAAATTATCAACTATGTTCAATCTCTGCAAAGACAAGTTGAGTTCTTGTCAATGAAATTAGCTGCTGTGAACCCACGTCTTGAATTCAATCTGAACGTCGATGACATCTTTCCCAAAGAGGCACATCCTACATCCAATTTTCCGTCGGTAGGAATACAGTCAGAGCTCAACAGCCCTGCCTATCTCCACTTTGATCAATCCCATCAAATGGGTTCGTATTGCGGGTTGGATCCATCCGTCACGGCGCTTCGCCGGACAATCAGCGCTCCTGTTTCGATCCCGGAAAATTTTCTAGAGTCCGCCTGCTTTCCGCCCTCTTCAGCTTGGGTTGGAGATTTGCAGAGCCTGTATAACGTGGGATTTGATCAAGGAAGAACGGAAGCCTTTCCATCTCATCCATATGCAGGCTTCTACATTGTTTCCTATGGTCTTGGAATTTATCTGCTGAATTTGCTGATTGGTTTTCTATCACCTTTGGTTGATCCGGAAATGGAGGTTTCTCCTGGGCCTTTGCTGCCAACCAAAGGTTCCGATGAATTCAAGCCATTCATCCGGAGACTTCCTGAGTTTAAATTCTGGTACTCCTTTACTAAGGCGTTCTGCATTGCCTTTGTCATGACCTTCTTTTCAGTATTTGATGTCCCTGTCTTCTGGCCCATACTACTCTGTTACTGGATTGTTCTGTTTGTTCTTACAATGAGGCGACAAATCTCACACATGATGAAACACAAGTACATCCCCTTAAACATCGGAAAGCAGAATAATGATGGTGAAAAAACCTCAATGCATTCTTCCCAATCTATTTGGATTGCTCATTGGATGACCCCATTCTGCGAATCTGCAAACCTATTATGTAGCGGCTTACTACCTAATTACGAACTTAGCGAGGGGACTAATGGAGCTAAGGAGTATGATTTTTGTGATTTGCAAGAGGTTTTGCATGAAATTTCCAGTTGTGCCAAAAGATCTGGACAAGAATGTGAACGCAGAACATATAATATGGTCAAGGATAGTTCATCGGGGAGTTGTAAAATTGACAGGGAAGAAATGATGGATTTCCAGCCTTTTCCAATGTTTAGTCTATCTAAAAAAAGAAAAAGTAGTTTAACTCAGAATAATGACCAAGCTACCTCTGGTCATATCAGAGCACTTAGATCCCGATTCCATTACAGGTCTGAGCATCCCAAATCTATTCTTGCAGGGCTCCTGACAAAGCAAGGTAAAATGCTTCATTTTTCTTCTGTTTTCAGTGCAGTAGTATTATCTATTTTGGAGTTGAAAAGGAGCCAGCTGTTACTATCTCAAGCTGCAATTGCTTCCACTCTGAAGAAGACGGGAGAGAGAGCGATGAAAACTGTATTGCCTGGTAAAAACCACAATTTTCATCATCTTCTTACATCAAGTTCAAAAGAAAACCGTACGAAGATTCAGTCAATGACCCAGAGCTTGGATGATGTCCGTTTCCATGCTGATCTGAACCGCACAAAATCAATTACTTGCACATATGACTCTTTTGAACAATTGCTGAGCAGCCAATGGATTGGTCGCTTCAAGATAAATTCTTCTAAGTTTGCTAACTTTACACCAAAATCAAGAAAGGGGGAAGCTACTTCTAATGAAATGACCGATGAATTCATCAGCAAAATTATGAATAGTACAAGTTCGGAACCCACAGGTGAACACCATCAATATGTACTAATGACATTCAATCAAACTGCAAAGACATCTGAGAAGAAAGTCTCTTGCAGCGAAATGGAGAGACAAATTCAAGAAACAGCATTTTCAGACCCCTGGATTAGCAGGTGGCGTGTTAGCAGAGATGCTTTCCTTCTGAAGAAACCCAAAGCAACGTCAGTTTGTGATCCTCAGTCTTCAAAGCTACTTCTTGATCAGACACAAATAGAACAGTTTTCAAGGATTGCTTCTATGGCATTGATGGGAAAGACCTTGACCCGAAAGCACACGTCGTTGAAACGGGAAGCCACTCGAGTTTGGAATATGGAAGGGTTTTGA | 2979 | 43.27 | MGAGSRASYLLHEVEMDHKGLESIRATKPFIAMSISIFVKCLTGQNPNHFSSFTFLEMNRALPEMLHCFTAPGNCADMTVLERQTARLKWHQDQLHHHNLHSYFSHSFPAPIQPDYVPDSFIVSRETEFGEVVLGSVKPDPGLENGWPELGKFETPTMDFGSGLELDPSISRTSGSPPAMMEAKNIESILSEKLNSPVGRESFKKRKTNTKIISEEDTKEKRIKLCAEEGESKVTDQIQTKNNSAATTANRETSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLEFNLNVDDIFPKEAHPTSNFPSVGIQSELNSPAYLHFDQSHQMGSYCGLDPSVTALRRTISAPVSIPENFLESACFPPSSAWVGDLQSLYNVGFDQGRTEAFPSHPYAGFYIVSYGLGIYLLNLLIGFLSPLVDPEMEVSPGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQISHMMKHKYIPLNIGKQNNDGEKTSMHSSQSIWIAHWMTPFCESANLLCSGLLPNYELSEGTNGAKEYDFCDLQEVLHEISSCAKRSGQECERRTYNMVKDSSSGSCKIDREEMMDFQPFPMFSLSKKRKSSLTQNNDQATSGHIRALRSRFHYRSEHPKSILAGLLTKQGKMLHFSSVFSAVVLSILELKRSQLLLSQAAIASTLKKTGERAMKTVLPGKNHNFHHLLTSSSKENRTKIQSMTQSLDDVRFHADLNRTKSITCTYDSFEQLLSSQWIGRFKINSSKFANFTPKSRKGEATSNEMTDEFISKIMNSTSSEPTGEHHQYVLMTFNQTAKTSEKKVSCSEMERQIQETAFSDPWISRWRVSRDAFLLKKPKATSVCDPQSSKLLLDQTQIEQFSRIASMALMGKTLTRKHTSLKREATRVWNMEGF | 992 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 4377456 | 4390429 | + | BLOR13426 | Blo04g00514 | 59542 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo04g00514 | 992 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 279 | 350 | IPR036638 | GO:0046983 | |
| Blo04g00514 | 992 | SMART | finulus | 287 | 337 | IPR011598 | GO:0046983 | |
| Blo04g00514 | 992 | PANTHER | TRANSCRIPTION FACTOR BHLH63-LIKE | 77 | 450 | - | - | |
| Blo04g00514 | 992 | MobiDBLite | consensus disorder prediction | 256 | 292 | - | - | |
| Blo04g00514 | 992 | MobiDBLite | consensus disorder prediction | 236 | 255 | - | - | |
| Blo04g00514 | 992 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 281 | 331 | IPR011598 | GO:0046983 | |
| Blo04g00514 | 992 | MobiDBLite | consensus disorder prediction | 231 | 292 | - | - | |
| Blo04g00514 | 992 | CDD | bHLH_AtBPE_like | 271 | 354 | - | - | |
| Blo04g00514 | 992 | Gene3D | - | 278 | 354 | IPR036638 | GO:0046983 | |
| Blo04g00514 | 992 | Pfam | Rer1 family | 457 | 576 | IPR004932 | GO:0016021 | |
| Blo04g00514 | 992 | Pfam | Helix-loop-helix DNA-binding domain | 285 | 332 | IPR011598 | GO:0046983 | |
| Blo04g00514 | 992 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 77 | 450 | IPR024097 | GO:0006355 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo04g00514 | Blo15g00705 | CCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo02g00804 | Blo-Chr2:27792248 | Blo04g00514 | Blo-Chr4:4377456 | 8.75E-135 | dispersed | |
| Blo04g00514 | Blo-Chr4:4377456 | Blo15g00700 | Blo-Chr15:22161819 | 1.30E-116 | dispersed | |
| Blo12g00154 | Blo-Chr12:10470222 | Blo04g00514 | Blo-Chr4:4377456 | 1.48E-37 | dispersed | |
| Blo13g00550 | Blo-Chr13:27394887 | Blo04g00514 | Blo-Chr4:4377456 | 0 | transposed | |
| Blo15g00705 | Blo-Chr15:22416807 | Blo04g00514 | Blo-Chr4:4377456 | 3.95E-16 | transposed | |
| Blo13g00549 | Blo-Chr13:27385793 | Blo04g00514 | Blo-Chr4:4377456 | 1.87E-75 | wgd | |
| Blo17g00791 | Blo-Chr17:25279139 | Blo04g00514 | Blo-Chr4:4377456 | 3.64E-69 | wgd | |
| Blo18g00810 | Blo-Chr18:23881782 | Blo04g00514 | Blo-Chr4:4377456 | 1.38E-63 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 12264 | PF03248 | Rer1 | 2.00E-55 | No_clan | Blo | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo04g00514 | - | - | jre:109013802 | 466.077 |