Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00527 ATGGGTACTTGGGGATTGTTTCCTGCTATTCGTTTGGTTGCAGTTGTTGCTATTCTGGGTTTGGTTTTGGATGGGGCTGTGCTGTGCATAGCCGGAAAAACAAGCGAGTTCGTGAGGAAAGTTGAGAAAACTATGGATATGCCTTTCGACAGCGATGTCTTCCGAGTTCCTCCCGGCTACAATGCCCCACAGCAGGTTCATATAACACAAGGAGACCACTGGGGAAAAGCTGTGATTGTTTCTTGGGTCACTCCTGCAGAACCAGGATCAAACACTGTCCTCTACTGGAGTGAAAATAGCAACTCAAAGGAAAAGGCTCAAGCCAAAGTTTATACCTATAAGTTCTACAACTACGCTTCTGGTTTCATTCATCACTGCACCATCATAAACTTGGAGTATGACACCAAGTATTATTACAAGGTTGGGATTGGACAATCTCCGCGAACGTTTTGGTTTGTGACTCCTCCTAAAGTTGGTCCTGATGTCGCATATACATTTGGTCTTATTGGGGATCTTGGCCAGAGTTTCGATTCGAACAAGACACTAACTCATTATGAACATAACCCACAAGAAGGAAAAGCTGTTCTTTTTGTGGGAGATCTTTCTTATGCCGATAATTATCCAAATCACGACAACGTGAGGTGGGATACATGGGGAAGATTTATTGAGAGAAGTGTTGCTTATCAGCCTTGGATATGGACTGCTGGAAATCATGAAATTGATTTTGTTCCTGAAATAGGCGAAACAAAACCTTTCAAGCCTTATACTCATCGTTACCATGTCCCCTTCCGCGCGTCAGCTAGCACGGCTCCATTCTGGTACTCGATCAAGAGGGGGCCGGCCTATATCATAGTCTTAGCGTCCTATTCGGCCTATGGTAGATACACTCCTCAGTACAAATGGCTTGAAGCGGAGCTACCAAAAGTTAACAGAAGCGAAACGCCATGGTTGATCGTTCTGATGCATTCTCCTTGGTACAATAGCTATAACTATCACTATATGGAAGGAGAAACCATGAGAGTGATGTTCGAAGCCTGGTTTGTTAAATTCAAGGTTGATGTCGTCTTTGCCGGCCACGTCCATGCCTACGAAAGATCGGAAAGGGTTTCTAACATTGCATACAAAGTGGTGAATGGCATTTGCACGCCCGTGAAGGACCAATCTGCGCCTGTATACATCACCATCGGTGACGGAGGGAACCTCGAAGGCTTGGCAGCTAACATGACGGAGCCGCAGCCAAAATACTCGGCCTATCGAGAAGCCAGCTTTGGGCATGGCATATTTGACATTAAGAATCGAACACATGCGTATTTTAGTTGGCATCGGAATGATGACGGATATGCAGTGGAGGCTGATTCGATGTGGTTTCTTAATCGATTCTGGGATCCGGTCGATGATTCCACGGTTGCAGATTCTTGA 1419 45.45 MGTWGLFPAIRLVAVVAILGLVLDGAVLCIAGKTSEFVRKVEKTMDMPFDSDVFRVPPGYNAPQQVHITQGDHWGKAVIVSWVTPAEPGSNTVLYWSENSNSKEKAQAKVYTYKFYNYASGFIHHCTIINLEYDTKYYYKVGIGQSPRTFWFVTPPKVGPDVAYTFGLIGDLGQSFDSNKTLTHYEHNPQEGKAVLFVGDLSYADNYPNHDNVRWDTWGRFIERSVAYQPWIWTAGNHEIDFVPEIGETKPFKPYTHRYHVPFRASASTAPFWYSIKRGPAYIIVLASYSAYGRYTPQYKWLEAELPKVNRSETPWLIVLMHSPWYNSYNYHYMEGETMRVMFEAWFVKFKVDVVFAGHVHAYERSERVSNIAYKVVNGICTPVKDQSAPVYITIGDGGNLEGLAANMTEPQPKYSAYREASFGHGIFDIKNRTHAYFSWHRNDDGYAVEADSMWFLNRFWDPVDDSTVADS 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4539168 4541745 - BLOR13439 Blo04g00527 59555

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00527 472 Pfam Calcineurin-like phosphoesterase 165 363 IPR004843 GO:0016787
Blo04g00527 472 SUPERFAMILY Metallo-dependent phosphatases 162 466 IPR029052 -
Blo04g00527 472 Pfam Purple acid Phosphatase, N-terminal domain 63 148 IPR015914 GO:0003993|GO:0046872
Blo04g00527 472 CDD MPP_PAPs 160 458 IPR041792 -
Blo04g00527 472 Gene3D - 62 158 - -
Blo04g00527 472 PANTHER PURPLE ACID PHOSPHATASE 13 469 - -
Blo04g00527 472 PANTHER ACID PHOSPHATASE RELATED 13 469 IPR039331 GO:0003993
Blo04g00527 472 SUPERFAMILY Purple acid phosphatase, N-terminal domain 46 156 IPR008963 GO:0003993|GO:0046872
Blo04g00527 472 Pfam Iron/zinc purple acid phosphatase-like protein C 389 448 IPR025733 -
Blo04g00527 472 Gene3D - 159 468 IPR029052 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00527 K22390 ACP7; acid phosphatase type 7 - jre:109005736 842.417
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00527 Blo-Chr4:4539168 Blo13g00512 Blo-Chr13:26635057 0 dispersed
Blo17g00768 Blo-Chr17:24500364 Blo04g00527 Blo-Chr4:4539168 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g11 . . . . . . . . . . . . . . . Cpe04g00114 . . . . . . . . Cla02g00499 Cam02g0509 Cec02g0509 Cco02g0515 Clacu02g0511 Cmu02g0507 Cre02g0840 . . . . . . . Cme01g01364 Blo04g00527 . . Bda14g00570 . . Bma03g00564 . . . . . . . . . . . . . . . . . . . . . . . . Lsi11g01126 . Chy01g00759 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000712 2 3 4 4 1 3 4 3 3 3 3 3 3 3 3 3 3 5 4 3 4 3 3 3 3 3 3 4 3 5 97
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo04g00527 Blo_Chr04 FPKM 14.842478 15.445629 11.130498 12.362715 17.600384 16.005428 18.505524 10.720613 10.254544 11.072774