Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00544 ATGCCACCTTCGCACCCTCATCAAATTCCACCCATTTCGCCCTATTCTCAGATCCCAATTCCTCGACCGGTGAACCATCTAATTGGATCGCAGAATCACACATCGGGACCCACTCATTCCCGATCATTGTCACAGCCATCGTTTTTCTCTCTCGATTCTTTACCGCCATTGAGCCCCTCACCATTTCGTGACTCTCCAACCTCATCAATTTCAGACCAGGTTTCAGCCGATGCGTCAATGGAGGATAGAGATGCAAGTTCACATTCTTTGTTGCCTCCCTCGCCTTATCCAAAGGGACATTTTTTGAAAGTTGGTGATAGTATTCCACCTCGTAAAGCTCATAGGAGGTCTAATAGTGATATTTCGTTTGGATTTTCGACGGTGATGCAGTCATCTCCCCCCCTGCTTCCATTAAGGGGTTCAGGTAGTTTAGAGAGGTCAGTGTCTGGTAAAGATAATTTTGTAATGGCAAAGCCTACCCACATAGTCAAAAGAGAGAGTAACTGGGAAAGAGGTGGGGATGACAATGCAGAAGGAATGGGCGAAAGGAAATCCGAAGGGGATGTTATGGAAGATCTGTTCTCAGCTTATATGAATTTGGACAATATTGATTCATTGAACTCGTCAGGAACTGAGGAGAAGAACGGAAATGAGAATGGCGAAGATTTGGATAGTAGAGCTAGTGGAACAAAGACAAATGGAGGTGATAGCAGTGATAATGAAGCAGAAAGCAGCGTGAATGAAAATGGTGGAACCACTCATAGGCCTGGATTGAGTTCTTCGACTGACAAAAAGGAAGGGATCAAAAGGAGTGCTGAAGGAGATATTGCTCCAACCATCCGACACTATCGAAGCCTTTCCATGGATAGTTTCATAGGCAAGTTGCAGTTTGGTGATGATTCTTCTAAAATGCCTCCATCGCCCCGTGGTCATCCTGGCCACCTCTCACCGAGCACTTTGGTTGATGGTAGTTCGACTCCATTTAGCTTGGAGTTTGGAAATGGCGAGTTCAGTGGGGCTGAACTGAAGAAAATTATGGCAAATGACAAGCTTGCTGAGATTGCCGCGACTGACCCAAAGCGTGTCAAAAGGATCTTGGCTAATCGACAATCAGCTGCTCGTTCAAAGGAACGGAAGATGAGGTATATTTCCGAGTTGGAACACAAAGTTCAAACACTCCAAACGGAAGCTACCACACTGTCTGCCCAGCTTACTCTTCTTCAGAGAGATTCTGTGGGGCTCACAAACCAGAACAATGAGCTCAAGTTTCGTCTCCAAGCCATGGAGCAACAAGCACAGCTCCGAGATGCTCTAAACGAAGCTTTGACGACCGAAGTTCAGCGACTGAAACTGGCGACAACAGATATAAACGCCCAAGCTTCGATGTTTCAGATGCAGAATCAGCACGCCCCACAAACCACCCAACACAATGCGCATCGGCACCAGAACAGCCCTGCAGCCGCAAAACCGGAGTCGATCCAATAG 1485 46.8 MPPSHPHQIPPISPYSQIPIPRPVNHLIGSQNHTSGPTHSRSLSQPSFFSLDSLPPLSPSPFRDSPTSSISDQVSADASMEDRDASSHSLLPPSPYPKGHFLKVGDSIPPRKAHRRSNSDISFGFSTVMQSSPPLLPLRGSGSLERSVSGKDNFVMAKPTHIVKRESNWERGGDDNAEGMGERKSEGDVMEDLFSAYMNLDNIDSLNSSGTEEKNGNENGEDLDSRASGTKTNGGDSSDNEAESSVNENGGTTHRPGLSSSTDKKEGIKRSAEGDIAPTIRHYRSLSMDSFIGKLQFGDDSSKMPPSPRGHPGHLSPSTLVDGSSTPFSLEFGNGEFSGAELKKIMANDKLAEIAATDPKRVKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAQLRDALNEALTTEVQRLKLATTDINAQASMFQMQNQHAPQTTQHNAHRHQNSPAAAKPESIQ 494
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4689415 4691378 + BLOR13456 Blo04g00544 59572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00544 494 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 358 421 IPR004827 GO:0003700|GO:0006355
Blo04g00544 494 Coils Coil 376 431 - -
Blo04g00544 494 MobiDBLite consensus disorder prediction 466 494 - -
Blo04g00544 494 MobiDBLite consensus disorder prediction 119 137 - -
Blo04g00544 494 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 25 457 - -
Blo04g00544 494 MobiDBLite consensus disorder prediction 1 279 - -
Blo04g00544 494 MobiDBLite consensus disorder prediction 1 18 - -
Blo04g00544 494 PANTHER ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 25 457 - -
Blo04g00544 494 MobiDBLite consensus disorder prediction 200 214 - -
Blo04g00544 494 SMART brlzneu 356 420 IPR004827 GO:0003700|GO:0006355
Blo04g00544 494 Gene3D - 359 411 - -
Blo04g00544 494 MobiDBLite consensus disorder prediction 226 258 - -
Blo04g00544 494 MobiDBLite consensus disorder prediction 259 277 - -
Blo04g00544 494 MobiDBLite consensus disorder prediction 163 190 - -
Blo04g00544 494 CDD bZIP_plant_RF2 361 410 IPR044759 GO:0003700|GO:0006355
Blo04g00544 494 MobiDBLite consensus disorder prediction 27 54 - -
Blo04g00544 494 MobiDBLite consensus disorder prediction 297 321 - -
Blo04g00544 494 Pfam bZIP transcription factor 360 414 IPR004827 GO:0003700|GO:0006355
Blo04g00544 494 SUPERFAMILY Leucine zipper domain 360 411 IPR046347 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00544 Blo13g00530 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00544 Blo-Chr4:4689415 Blo14g00054 Blo-Chr14:325091 8.24E-52 dispersed
Blo13g00530 Blo-Chr13:27072180 Blo04g00544 Blo-Chr4:4689415 0 wgd
Blo17g00749 Blo-Chr17:23503188 Blo04g00544 Blo-Chr4:4689415 5.12E-159 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12269 PF00170 bZIP_1 1.10E-08 CL0018 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00544 - - jre:108986979 649.047