Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00573 ATGGCGAAGGATGTGTTGGAAGAGGGGCATGGCAACAAGGACTACGTCGACCCACCACCTGCGCCATTCATCGACATTGGCGAGCTCAAGCAATGGTCGTACTACAGAGCCCTCATCGCCGAGTTCATCGCCACCCTTCTCTTCCTCTACGTTTCTATAGCCACTGTCATCGGCAATTTCAAGCAACCCGGCGACTGTAATGGCGTCGGACTTCTGGGTATCGCTTGGGCCTTCGGCGGCATGATCTTCATCCTAGTCTACTGCACCGCCGGTATTTCTGGTGGTCATATCAATCCGGCGGTGACTTTCGGGCTGTTTTTGGCTAGGAAAGTGTCGCTTATTCGAGCTGTGGCGTACATGGTGGCTCAATGTCTGGGAGCCATCGCCGGCGTCGGGTTGGTCAAGGCCTTCATGAAGCACGACTACAACCACAACAACGGAGGAGTTAACGTCGTTAACGAAGGGTACCGCTCGGGCACAGCTCTTGGTGCGGAGATTATCGGCACTTTCGTGCTTGTTTACACTGTTTTCTCCGCCACCGACCCAAAGAGGAGCGCTCGAGACTCTCACGTCCCTGTTTTGGCTCCACTGCCAATTGGGTTCGCCGTGTTCATGGTACACTTGGCCACCATTCCGATCACCGGAACTGGTATTAACCCTGCACGGAGCTTCGGAGCTGCTGTTATCTTCAACAACAAAAAAGCCTGGGATGATCAATGGATCTTCTGGGTGGGGCCTTTCGTCGGGGCGCTGGCTGCAGCGGTGTACCACCAGTACATTCTGAGAGCGGCAGCCATTAAAGCGTTGGGATCCTTCCGCAGCTATCCTAGCAATTAA 837 54.48 MAKDVLEEGHGNKDYVDPPPAPFIDIGELKQWSYYRALIAEFIATLLFLYVSIATVIGNFKQPGDCNGVGLLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAIAGVGLVKAFMKHDYNHNNGGVNVVNEGYRSGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNNKKAWDDQWIFWVGPFVGALAAAVYHQYILRAAAIKALGSFRSYPSN 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4927713 4928799 + BLOR13485 Blo04g00573 59601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00573 278 Pfam Major intrinsic protein 28 257 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo04g00573 278 TIGRFAM MIP: MIP family channel proteins 40 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo04g00573 278 CDD MIP 36 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo04g00573 278 PRINTS Major intrinsic protein family signature 115 134 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo04g00573 278 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo04g00573 278 PRINTS Major intrinsic protein family signature 200 222 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo04g00573 278 PRINTS Major intrinsic protein family signature 240 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo04g00573 278 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo04g00573 278 PRINTS Major intrinsic protein family signature 164 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo04g00573 278 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 276 IPR034294 -
Blo04g00573 278 PANTHER BNAC03G65520D PROTEIN 1 276 - -
Blo04g00573 278 SUPERFAMILY Aquaporin-like 28 262 IPR023271 -
Blo04g00573 278 Gene3D Glycerol uptake facilitator protein. 21 278 IPR023271 -
Blo04g00573 278 ProSitePatterns MIP family signature. 96 104 IPR022357 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00573 Blo13g00500 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00573 Blo-Chr4:4927713 Blo14g00177 Blo-Chr14:1386783 8.96E-155 dispersed
Blo09g00333 Blo-Chr9:13689407 Blo04g00573 Blo-Chr4:4927713 3.87E-12 dispersed
Blo12g00467 Blo-Chr12:22213450 Blo04g00573 Blo-Chr4:4927713 9.19E-46 dispersed
Blo15g00657 Blo-Chr15:18671074 Blo04g00573 Blo-Chr4:4927713 1.55E-24 dispersed
Blo02g00662 Blo-Chr2:17327538 Blo04g00573 Blo-Chr4:4927713 1.96E-162 transposed
Blo07g01418 Blo-Chr7:34178882 Blo04g00573 Blo-Chr4:4927713 2.94E-11 transposed
Blo13g00500 Blo-Chr13:26328730 Blo04g00573 Blo-Chr4:4927713 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00573 K09872 - tcc:18607531 487.263