Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00583 ATGTTAGCGAAATTAGCAAACTTTTTGAGGGCCTGTTTCCGGCCACGGTCAGATGGATATGTCGGCTCGGATGCTGGAGGCAGACAGGAAGGCCTGCTTTGGTACAAAGATAGCGGACAACATCTGAATGGTGAATTTTCTATGGCTGTTGTTCAAGCCAACAATTTACTTGAGGATCAGAGCCAGATTGAGTCCGGAAGTTTGAGCTTGAGTGAGTCTGGTCCGTATGGTGTATTTGTTGGTGTATATGATGGGCATGGAGGACCCGAGACATCTCGCTACATAAATGATCACCTCTTTCAGCATCTGAAAAGGTTCACTTCTGAACACCAAGCCATGTCTGTGGACGTAATTCGTAAGGCAATTCAAGCAACGGAGGAGGGATTTATGTCAGTGGTTACAAAGCAATGGCCAATGAAGCCGCAAATCGCAGCTGTCGGATCTTGCTGTCTTGTGGGGGTTATATGCGGTGAATACCTTTATATCGCCAATCTTGGTGATTCTCGTGCCGTTTTGGGAAGAATCGTAAAAGCTACAGGGGAGGTTCTTTCAATCCAACTGTCAGCCGAACACAATGCAAGCATAGAATCGGTGAGACAAGAGCTGCAATCTTTGCATCCTGATGACTCTCAGATTGTCGTCTTGAAGCATAACGTCTGGCGTGTTAAGGGCCTTATTCAGGTATATGGTTATGTTATATTTAGTAAAATTTCCAGACTCTTTTTCCATCTTCTTAATAAATGGATTGATTGTTGTGGTGTAATTCTGAAATGCGAAAACTTTATATATACTAAAGCAGTTGCCGTTTCCCGATCTATTGGCGACGTGTATTTGAAAAAACCCGAGTTCAATCGGGAGCCTCTGTATGTAAGGTTTCGCCTTCGGGAGTCTTTCAAGAAGCCAATTTTGAGCTCTGAGCCATCCATTTCCGTCGTTCAGTTGGAACCCCACGATCAATTTATTATATTTGCTTCGGATGGACTTTGGGAACACGTTACTAATCAGGAAGCAGTTGATATAGTCCAGAAACAACCACACAGTGGAAGTGCAAGGAGGCTGGTGAGAGCCGCTCTGCAAGAAGCAGCAAAGAAGAGGGAAATGAGATATTCCGATTTGAAGAAGATCGACCGAGGGGTACGTAGGCATTTCCATGACGATATCACCGTGATTATCGTCTTTCTCGACTCCAACCTCGTATGCAGGGCCAGCTCGGGAAAGAGCCCGAGTGTGTCAGTGAGAGGCGGTGGAATCCATCTCCCTCACAACACCTTGGCTCCTTTTGCTGCACCAGCTGAATCTGGAGAGTACAGAACCGTTTCTGGGGTTGCTGGACCTTTGGTTATCCTAGAAAAAGTTAAGGGACCCAAATTCCAGGAAATTGTTAATATTCGCTTAGGCGATGGAACAACCCGACGCGGCCAAGTTCTTGAAGTTGATGGGGAGAAAGCTGTTGTTCAGGTTTTTGAAGGAACTTCTGGAATTGACAATAAGTATACAACAGTGCAATTCACTGGAGAGGTTTTGAAAACGCCGGTCTCATTGGATATGCTTGGCCGCATATTTAATGGCTCCGGAAAGCCCATTGATAATGGTCCCCCTATTTTGCCCGAGGCATACTTGGATATTTCTGGTGATTCCATCAACCCGAGTGAGAGGACATATCCGGAAGAGATGATACAGACTGGGATTTCGACGATTGACGTTATGAATTCCATTGCTAGAGGACAAAAGATTCCACTTTTCTCGGCTGCTGGTCTTCCTCATAACGAAATTGCTGCTCAAATATGTCGGCAGGCTGGTTTAGTCAAACGGTTAGAGAAATCAGATAATCTTCTCGAGGATACAGCAGAAGACAACTTTGCTATTGTTTTTGCAGCTATGGGTGTAAACATGGAAACTGCACAGTTTTTCAAGCGAGATTTTGAAGAAAATGGATCAATGGAGAGAGTGACCTTGTTTCTTAATCTTGCTAATGATCCAACGATTGAGCGTATTATTACTCCGCGAATTGCTCTTACTACGGCTGAGTATTTGGCTTATGAATGTGGAAAGCATGTTCTTGTCATTCTGACTGACATGAGTTCCTACGCTGATGCTCTTCGTGAGGTGTCTGCTGCTCGGGAGGAAGTACCTGGAAGGCGTGGGTATCCTGGTTATATGTATACTGATCTGGCCACAATATATGAGCGTGCCGGACGAATCGAGGGACGAAAAGGGTCCATCACCCAAATTCCAATTCTAACTATGCCTAATGATGATATCACGCATCCGACACCAGATCTTACTGGATATATTACGGAGGGACAGATATACATTGATAGGCAGCTACATAATCGACAGATTTATCCACCAATCAACGTCCTGCCTTCCTTATCTCGTCTCATGAAGAGTGCTATTGGTGAGGGGATGACACGTAGGGATCATGCCGATGTATCCAACCAGCTCTATGCAAACTATGCAATTGGGAAGGACGTTCAGGCAATGAAAGCTGTGGTCGGAGAAGAAGCTCTTTCTTCTGAAGACCTGCTTTATCTGGAATTCTTGGACAAGTTTGAGAGGAAGTTTGTCACACAAGGAGCCTACGACACCCGTAATATCTTCCAATCACTCGACTTAGCATGGACTTTGCTTCGAATTTTCCCTCGCGAACTCCTGCACCGTATACCGGCAAAGACCCTCGACCAATACTACAGCCGAGAAACAGCTAATTAA 2712 45.1 MLAKLANFLRACFRPRSDGYVGSDAGGRQEGLLWYKDSGQHLNGEFSMAVVQANNLLEDQSQIESGSLSLSESGPYGVFVGVYDGHGGPETSRYINDHLFQHLKRFTSEHQAMSVDVIRKAIQATEEGFMSVVTKQWPMKPQIAAVGSCCLVGVICGEYLYIANLGDSRAVLGRIVKATGEVLSIQLSAEHNASIESVRQELQSLHPDDSQIVVLKHNVWRVKGLIQVYGYVIFSKISRLFFHLLNKWIDCCGVILKCENFIYTKAVAVSRSIGDVYLKKPEFNREPLYVRFRLRESFKKPILSSEPSISVVQLEPHDQFIIFASDGLWEHVTNQEAVDIVQKQPHSGSARRLVRAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIIVFLDSNLVCRASSGKSPSVSVRGGGIHLPHNTLAPFAAPAESGEYRTVSGVAGPLVILEKVKGPKFQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGDSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEDTAEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRETAN 903
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5022477 5029808 + BLOR13495 Blo04g00583 59611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00583 903 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 435 903 IPR022879 -
Blo04g00583 903 PANTHER V-TYPE PROTON ATPASE SUBUNIT B1-RELATED 435 903 - -
Blo04g00583 903 SMART PP2C_4 37 392 IPR001932 -
Blo04g00583 903 TIGRFAM V-ATPase_V1_B: V-type ATPase, B subunit 435 902 IPR005723 GO:0033180|GO:0046961|GO:1902600
Blo04g00583 903 CDD ATP-synt_V_A-type_beta_N 435 506 - -
Blo04g00583 903 Pfam Protein phosphatase 2C 78 362 IPR001932 -
Blo04g00583 903 SUPERFAMILY PP2C-like 54 395 IPR036457 -
Blo04g00583 903 ProSitePatterns ATP synthase alpha and beta subunits signature. 783 792 IPR020003 GO:0005524
Blo04g00583 903 ProSiteProfiles PPM-type phosphatase domain profile. 45 394 IPR001932 -
Blo04g00583 903 Gene3D - 444 903 - -
Blo04g00583 903 CDD PP2Cc 46 394 IPR001932 -
Blo04g00583 903 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 509 798 IPR027417 -
Blo04g00583 903 Gene3D - 34 402 IPR036457 -
Blo04g00583 903 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Blo04g00583 903 CDD V_A-ATPase_B 507 794 - -
Blo04g00583 903 Hamap V-type ATP synthase beta chain [atpB]. 433 901 IPR022879 -
Blo04g00583 903 Pfam ATP synthase alpha/beta family, beta-barrel domain 439 505 IPR004100 GO:0046034|GO:1902600
Blo04g00583 903 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 562 792 IPR000194 GO:0005524
Blo04g00583 903 CDD ATP-synt_V_A-type_beta_C 802 896 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00583 Blo13g00496 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00583 Blo-Chr4:5022477 Blo13g00497 Blo-Chr13:26208463 0 dispersed
Blo10g00587 Blo-Chr10:17543503 Blo04g00583 Blo-Chr4:5022477 2.44E-29 dispersed
Blo12g00070 Blo-Chr12:4696951 Blo04g00583 Blo-Chr4:5022477 3.02E-108 dispersed
Blo16g00724 Blo-Chr16:28141895 Blo04g00583 Blo-Chr4:5022477 1.77E-24 dispersed
Blo13g00496 Blo-Chr13:26200860 Blo04g00583 Blo-Chr4:5022477 0 wgd
Blo15g00384 Blo-Chr15:5408640 Blo04g00583 Blo-Chr4:5022477 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00583 K02147 - pda:103720190 912.909