Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00645 ATGCTGCAATTGCGTTTCCTGCTCATTCTTCTCTTCTTTCCTCTCACTTTTTCTTTGAACCAAGATGGCCTCTATCTTCAGCAAGTTAAACTCGGCCTCTCCGACCCTTCTCTCTCCCTCTCTTCCTGGAACAGCCGAGACAATAACCCTTGTAAATGGTTCGGAATCACCTGTGACTCTGCAACTCAACGGGTCACCTCGGTCGATCTCGCCAACTGTGAGCTCTCCGGCCTTTTTCCCTCCTCTCTTTGCCTCATTCCTTCTCTCTCCTATCTCTCTCTTTTTAACAACTCCATTAACTCTTCCCTCACACCTGATATTGCCCAATGTCAAAGTCTTCTCTACCTTAATTTATCTCAGAATCTCTTCGTCGGTTCAATCCCCGATGCCCTTTCCCAAATCCCTCATCTTCGGCAGTTGGATCTCTCCGGTAACAACTTTTCGGGAGGCATACCGGCGAGCTTCGGTCAGTTTCGGCAACTTGAATATCTCATAATTGTTGATAATCTTTTGAATGGGACTATTCCTATTTCTCTCGGCAACATTTCGAGCTTGAAAGAGCTTCAGCTTGCTTACAACCCTTTGACTCCGGGTCATATACCGAGTGAAATCGGTAACTTGACGAGTCTGGAGGTTCTCTGGCTCAGCAACTGTAATCTCGTGGGTCAGATTCCCCCGAGTCTAGGTCGACTGTCTAGGCTCAAAAATCTTGATTTGTCTGCTAACGATCTCAGTGGGACAGTTCCCGATTCATTTTCTGATTTGAGAAGCGTTGTCCAGATTGAGCTCTATATGAACTCACTTTCCGGCGTGTTTCCGACGAGAGTGTCCAATTTGACTGCACTGCGACGAATTGACATCTCGATGAATGAGTTCACTGGAACGATTCCCGAGGAACTGTGCTCGCTAGAGCTCGAATCGCTGAATTGTTATGAAAATCGTTTTGAAGGGTCTTTGCCGGAAAGCCTCTCTATGTCGCCATACTTATCAGAGCTCAGATTGTTCAACAACAAACTAAGTGGGGCATTACCTAGAGAGCTTGGAAAGAACTCGCCATTAGAGAATGTTGACGTTTCATATAATGCATTTTCCGGTGAAATTCCGGAAAGCTTGTGCTCAAAAGGGGTGCTAGAAGAGTTACTTTTGATATATAATTCATTTTCTGGCCAAATCCCTGAAAGTCTCAAAAAATGCACGAGTTTAAGTAGGGTTCGGCTGCGGAACAACAATCTTTCCGGCGAGGTGCCTGAGGAATTATGGGGCCTACCGCATATTTATTTGCTAGACCTTGTCCAGAATTCACTGGTTGGTTCAATTTCTAAGATGATTTCTGGTTCTGGGAATCTCTCAATCTTGTTGCTTTCGAAGAACAGTTTTTCGGGATCCATACCTGATGAAATAGGATCGCTTAAAAGTTTGCACGAATTTTCAGGGAGTGATAATAAGTTTTCCGGTCTACTTCCTGGAAGTTTGGTTGAATTGAGCCAGTTAGCAAAACTTGATCTCAGTGACAATAGAATTTCCGGCGAGATACCGGGTGGAATTCAGGCTATGACGAGGCTAAACGAGCTCAATTTGGCAAATAACAGTCTATCTGGTACCATCCCAAACGAAATTGGAAAATTACCTGTTCTTAATTATCTTGATCTCTCAAACAACCGTCTTGGTGGGAAAATTCCACTTGAATTACAAAATTTGAAGCTTAGTTTACTAAATTTGTCTAATAATCTCTTCACCGGTGATCTTCCTCCTCTCTATGCCAAGTCCAGCTACGAGAACAGCTTTCTGGGTAATCCAGGATTATGCAATGACCTCCCAGATCTCTGTTCTAACTCCGACCAAACTAAGAATCGGGGGCTCCTCTGGGTTTTCCTGTTCATTTTCATCTTATCTGGTTGTGTTTTTGCCATTGGGCTCATCTGGTTCTACTGGAAGTACTGGGCTTTCAAGAAGAACAAGAGAAGAACAGCCCTCTCAAAGTGGAAATCCTTCCACAGACTCGGTTTCAGCGAGGACGAAATCATCCAGAGCCTCAACGAAGGCAACGTCATCGGGAGTGGCGCTTCCGGAAAGGTCTACAAAGCAATACTCAGAAATGGAGAGGTAGTAGCAGTGAAAAGAATATGGGAAGAAGCCAAGAAAGATGAGATTAGCGTTGATTCAGAGAAAGACGGATTCGAGGCTGAAGTTGAAACGCTAGGAAAGATAAGGCACAAGAGTATTGTGAGATTATGGTGTTGTTACAACTCGGGAAACTACAAGCTCTTGGTTTATGAGTATATGCCTAATGGCAGCTTGGGAGACTTGTTGCATGGCAGCCGAAAAGGGTCGTTGGATTGGCCTACGAGATATAAGGTGGCCATCGATGCAGCCGAGGGGCTTTGTTATTTGCACCACGACTGTCTTCCCCCCGTGGTTCACCGCGATATTAAGTCGAACAATATATTGTTAGACGCAGAGTTTGGAGCTAAAGTCTCAGACTTTGGAGTTGCCAAGTTTTTGAAACTCAATAAAAGGTCAGAATCCATGTCTGTCATTGCTGGCTCTTGCGGCTACATTGCACCAGAGTATGCTTATACGCTGAGAGTGAATGAAAAGAGCGACATTTACAGCTTCGGAGTGGTGATTTTAGAGCTGGTGACGGGTCGACCCCCGAATCACGCGGATTATGGCGAGAAGGATTTGGTGAAATGGGCGTACAGCGCGTTGAGCGAGAAAGGGGAGGATCAAGTGATAGACTCCAGGCTGGAATCCAAATACAAGGAGGAGATCAGCAGAGTTCTGAGAGTGGGTTTCCTCTGCACAAGCTCCCTTCCCATCAACCGCCCTTCCATGAGAAAGGTGGTGAAGCTGCTTCATGAGGCAAACTCAGAAGCCAAGTCCACGTCGTTTAGAAAAATGGGTACGCTGTCCCCGTACTACAACGCTGATTTTTCTGATCATTGA 2946 45.32 MLQLRFLLILLFFPLTFSLNQDGLYLQQVKLGLSDPSLSLSSWNSRDNNPCKWFGITCDSATQRVTSVDLANCELSGLFPSSLCLIPSLSYLSLFNNSINSSLTPDIAQCQSLLYLNLSQNLFVGSIPDALSQIPHLRQLDLSGNNFSGGIPASFGQFRQLEYLIIVDNLLNGTIPISLGNISSLKELQLAYNPLTPGHIPSEIGNLTSLEVLWLSNCNLVGQIPPSLGRLSRLKNLDLSANDLSGTVPDSFSDLRSVVQIELYMNSLSGVFPTRVSNLTALRRIDISMNEFTGTIPEELCSLELESLNCYENRFEGSLPESLSMSPYLSELRLFNNKLSGALPRELGKNSPLENVDVSYNAFSGEIPESLCSKGVLEELLLIYNSFSGQIPESLKKCTSLSRVRLRNNNLSGEVPEELWGLPHIYLLDLVQNSLVGSISKMISGSGNLSILLLSKNSFSGSIPDEIGSLKSLHEFSGSDNKFSGLLPGSLVELSQLAKLDLSDNRISGEIPGGIQAMTRLNELNLANNSLSGTIPNEIGKLPVLNYLDLSNNRLGGKIPLELQNLKLSLLNLSNNLFTGDLPPLYAKSSYENSFLGNPGLCNDLPDLCSNSDQTKNRGLLWVFLFIFILSGCVFAIGLIWFYWKYWAFKKNKRRTALSKWKSFHRLGFSEDEIIQSLNEGNVIGSGASGKVYKAILRNGEVVAVKRIWEEAKKDEISVDSEKDGFEAEVETLGKIRHKSIVRLWCCYNSGNYKLLVYEYMPNGSLGDLLHGSRKGSLDWPTRYKVAIDAAEGLCYLHHDCLPPVVHRDIKSNNILLDAEFGAKVSDFGVAKFLKLNKRSESMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRPPNHADYGEKDLVKWAYSALSEKGEDQVIDSRLESKYKEEISRVLRVGFLCTSSLPINRPSMRKVVKLLHEANSEAKSTSFRKMGTLSPYYNADFSDH 981
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5653016 5656087 + BLOR13557 Blo04g00645 59673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00645 981 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 4 973 - -
Blo04g00645 981 ProSitePatterns Protein kinases ATP-binding region signature. 684 706 IPR017441 GO:0005524
Blo04g00645 981 Pfam Leucine rich repeat 87 147 IPR001611 GO:0005515
Blo04g00645 981 Pfam Leucine rich repeat 232 291 IPR001611 GO:0005515
Blo04g00645 981 SMART serkin_6 678 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00645 981 PRINTS Leucine-rich repeat signature 542 555 - -
Blo04g00645 981 PRINTS Leucine-rich repeat signature 234 247 - -
Blo04g00645 981 Gene3D Transferase(Phosphotransferase) domain 1 761 972 - -
Blo04g00645 981 SMART LRR_typ_2 231 254 IPR003591 -
Blo04g00645 981 SMART LRR_typ_2 279 303 IPR003591 -
Blo04g00645 981 SMART LRR_typ_2 86 110 IPR003591 -
Blo04g00645 981 SMART LRR_typ_2 494 517 IPR003591 -
Blo04g00645 981 SMART LRR_typ_2 518 542 IPR003591 -
Blo04g00645 981 SMART LRR_typ_2 134 157 IPR003591 -
Blo04g00645 981 SMART LRR_typ_2 182 207 IPR003591 -
Blo04g00645 981 Gene3D Ribonuclease Inhibitor 171 270 IPR032675 -
Blo04g00645 981 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 973 - -
Blo04g00645 981 Pfam Leucine Rich Repeat 209 230 IPR001611 GO:0005515
Blo04g00645 981 Pfam Leucine Rich Repeat 545 566 IPR001611 GO:0005515
Blo04g00645 981 Pfam Leucine rich repeat N-terminal domain 20 59 IPR013210 -
Blo04g00645 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Blo04g00645 981 Gene3D Ribonuclease Inhibitor 271 613 IPR032675 -
Blo04g00645 981 Gene3D Ribonuclease Inhibitor 18 170 IPR032675 -
Blo04g00645 981 SUPERFAMILY Protein kinase-like (PK-like) 674 952 IPR011009 -
Blo04g00645 981 ProSiteProfiles Protein kinase domain profile. 678 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00645 981 Pfam Protein kinase domain 680 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00645 981 Gene3D Phosphorylase Kinase; domain 1 662 760 - -
Blo04g00645 981 SUPERFAMILY L domain-like 305 606 - -
Blo04g00645 981 SUPERFAMILY L domain-like 34 372 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00645 Blo-Chr4:5653016 Blo08g00217 Blo-Chr8:2553633 0 dispersed
Blo04g00645 Blo-Chr4:5653016 Blo06g00036 Blo-Chr6:728171 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84236 PF00069 Pkinase 2.80E-44 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00645 - - csv:101208240 1291.17