Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00651 ATGCAAAGGAACGTCAACAACGGCGGCACTATGGCGGCTCAGCCTGCGTGCGCTGCCTGCAAGCACCAGCGGAAGAAGTGCGACGACGCTTGCACACTGGCTCCATATTTTACTGCAGACAGAACCAGAGAGTTCCAGGCTGTGCACCGAGTTTTCGGGGTGAGCAACGTGACGAAGATGGTGAAAAACGTGTGCGAAATGGATCGAAACAAGACGGTGGATTCATTAATCTGGGAAGCTCTGTGCAGGCAGAAGGATCCAGTTTCAGGTCCTTACGGAGAATACAGAAGAATTTACGACGAACTAAAGCTGTACAGAAGCCTAAACCAGACCCAAATGCTGAAAATAGCTGGGGTGGGGATGGGATGGAACAGTTCTTACGGGATAAATGACAAACCCAATAATGGAAATGGAGGGGGAATTATGAACAGTACTAGTAATGGCATAAGCTACAGTAACAGTCATGATAATTGGAGTTCTATCGTTGATTCTAGCCCTAATAGTTATCCTGCAACTTATATTCAAAGTCCGGAGATTTTAAGGAGCGAAAGAGAGGCTTCGTCTGTTGTTCTTCCACTTCAACACCAATCCCAGCAGGGCCATCATTCCATCAATGGCCTTACTTTCCAGCAATACTATCTTTCAGGGTGCTCTCTCCTACGAAGATTCGTAGAGATTGTTGATTGGAATTCGCATTCCCTCTCTTATTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTCTCTCTCTCTCTCTCTCTTCTTGTATGGCTCAGTTACCTCCAAAAATCCCAAACATGGCGGGGAATTGGCTGGAATTTTCTCACCAGAAGATTCCTGCAATCGTGGGGGGAGGAGACTTTCCACCAAATGCATCCGCACACCACCCTTCGTGGGTGGATGAATTCCTAGACTTCTCTTCATCCAGACGTGGGTCTCACCGACGGTCGGTTAGTGATTCCATTGCATTCCTCGAAATGCCCATGCTGGACGAATGCCGTGGCTCGGCGGCGAATCACGACGCCGGAGCGAACAACGAGTTCGATAGATTTGATGACGAACAATTCATGTCCATGTTTACTGACGAAATCTCATCAGCAGTGGGACCCACCGTGTCCTCCTCGAATCCTTCCACGCCTTCTGATCATAATAGCATTGATGATGAGAAGGAAGCGTTACATAATACCGATCAGAAGCAGCAGAAGAATGAATCTGACGAGGTCCAAAGCCATTGCAGGCCGGAAAACCAAGCTCCATACAGTGCAGCTGCCAACGCCGCCGCCGATAGGATAACCGACTCCAAAAGGGTCAAAAGAATCTTGGCGAATAGGCAGTCTGCGCAAAGATCAAGGGTCAGGAAACTGCAATACATATCAGAGTTGGAACGAAGTGTCACTTCTCTGCAAGCTGAAGTTTCTGTATTATCGCCGCGGGTGGCGTTTCTCGACCACCAAAGGTTGCTCCTAAACGTAGATAACAGTGCTCTTAAACAAAGGATCGCAGCTCTCGCCCAAGATAAGATTTTTAAAGATGCTCATCAAGAAGCACTGAAGAGAGACATCGAAAGACTGAGGCAAGTGTATCACCAGCAGAATCTAAAGAAGATCGAGAATATCGAGCATTCACCTCCTTCCGATTCGAAATCTGCAGCTGATAAAAAAGAAAACCTTCTTAACGTTTGA 1677 47.7 MQRNVNNGGTMAAQPACAACKHQRKKCDDACTLAPYFTADRTREFQAVHRVFGVSNVTKMVKNVCEMDRNKTVDSLIWEALCRQKDPVSGPYGEYRRIYDELKLYRSLNQTQMLKIAGVGMGWNSSYGINDKPNNGNGGGIMNSTSNGISYSNSHDNWSSIVDSSPNSYPATYIQSPEILRSEREASSVVLPLQHQSQQGHHSINGLTFQQYYLSGCSLLRRFVEIVDWNSHSLSYSSSSSSSSSSLSLSLSSCMAQLPPKIPNMAGNWLEFSHQKIPAIVGGGDFPPNASAHHPSWVDEFLDFSSSRRGSHRRSVSDSIAFLEMPMLDECRGSAANHDAGANNEFDRFDDEQFMSMFTDEISSAVGPTVSSSNPSTPSDHNSIDDEKEALHNTDQKQQKNESDEVQSHCRPENQAPYSAAANAAADRITDSKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKRDIERLRQVYHQQNLKKIENIEHSPPSDSKSAADKKENLLNV 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5695745 5702781 + BLOR13563 Blo04g00651 59679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00651 558 SMART brlzneu 429 493 IPR004827 GO:0003700|GO:0006355
Blo04g00651 558 MobiDBLite consensus disorder prediction 533 558 - -
Blo04g00651 558 SUPERFAMILY Leucine zipper domain 433 487 IPR046347 GO:0003700|GO:0006355
Blo04g00651 558 Coils Coil 512 532 - -
Blo04g00651 558 MobiDBLite consensus disorder prediction 365 427 - -
Blo04g00651 558 PANTHER BASIC LEUCINE ZIPPER 34 255 552 - -
Blo04g00651 558 ProSiteProfiles LOB domain profile. 15 115 IPR004883 -
Blo04g00651 558 MobiDBLite consensus disorder prediction 381 409 - -
Blo04g00651 558 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 431 483 IPR004827 GO:0003700|GO:0006355
Blo04g00651 558 Pfam bZIP transcription factor 433 476 IPR004827 GO:0003700|GO:0006355
Blo04g00651 558 PANTHER BASIC LEUCINE ZIPPER 61-LIKE 255 552 - -
Blo04g00651 558 CDD bZIP_plant_RF2 434 484 IPR044759 GO:0003700|GO:0006355
Blo04g00651 558 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 436 451 IPR004827 GO:0003700|GO:0006355
Blo04g00651 558 Gene3D - 432 505 - -
Blo04g00651 558 MobiDBLite consensus disorder prediction 365 380 - -
Blo04g00651 558 Pfam Lateral organ boundaries (LOB) domain 16 105 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00651 Blo-Chr4:5695745 Blo06g00800 Blo-Chr6:31263001 7.19E-27 dispersed
Blo14g00076 Blo-Chr14:544362 Blo04g00651 Blo-Chr4:5695745 8.14E-16 dispersed
Blo13g00415 Blo-Chr13:24118848 Blo04g00651 Blo-Chr4:5695745 2.33E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12282 PF03195 LOB 3.50E-30 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00651 - - qsu:112040072 429.483