Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g00653 | ATGGAACGTGGATCTAGTAGCAGCGGTAGCTCTTTTGTTGTAGGGTTTGGAGAAAACAGTTGCAGCACTGGGAGTGGACTTTGTTCGATGGGGACAGGGATGATGGCTCCGCCGATGAATAATTGCGGTGCAGAAATGGATCATAAGCTGTTTTTTCCTCTAGTCTGGAACAACTCCTCCACTAATAGCTCTAATAGCGGCCAAAGGGTGTCTGCTTTACTTCCGCAACACCATAGTCAAGGAGTTTCTTCTCTTATGGAGGTTAACAACGCTGAGTGTCAAAACAACAGCTCCAATGGCTGTTATTTGAGAGCTAAGATTATGGGTCACCCTCTTTTTTCTAGACTCTTGAACTCATATGTCAACTGTCAGAAGGTTGGGGCACCGCTTGAAGTGATGGCTAGGTTAGAGGAGGTCTGTGCTTCGTACAATGCAGCAACGGCTGGGGGCGATGGAAGGTCGTCGGAGACTGCAGGCTGTGTTGGAGAAGACCCTGCATTGGACCAGTTTATGGAGGCTTACTGTGAGATGCTGGCTAAGTATGAGCAAGAGCTCACAAAACCCTTCAAAGAAGCCATGCTTTTCTTCTCGAGAATTGAGTCTCAACTGAAAGCGTTGGAAGTTTCTTCTGTTTCTTCCGCCTGTAGGTTTGGAAGTTCCAAGGAAGAAGGGGTAGATGTCGTAGACAATTACATAGATCCTGAAGCGGAGGATAAAGATCTCAAACTTCAACTTTTACGCAAGTACAGTGGGTATCTCGGCAGTCTAAAGCAAGAATTTCTGAAGAAGAAGAAGAACGGCAAGTTGCCAAAGGAAGCCCGGCACAAACTGCTGGACTGGTGGACCAAACACTACAAATGGCCTTACCCCTCCGAGGGGCAGAAGGTGGCATTGGCGGATTCAACTGGTCTAGATCTGAAGCAGATCAACAACTGGTTTATAAACCAAAGGAAGCGCCATTGGAGGCCGTCTGATGATATGCAATTTGTGGTGATGGACGTCGATCATCCCGCCCATTACTATATGGATACTGGTGATTGTGTGTTAATGCGACCATCAGATTCTGATAAACCACCGTACGTAGCTCGCGTGGAGAAGATCGAAGCCGATCACCGCAACAACATTAAGGTTCGGGTAAGATGGTATTATCGACCAGAGGAGTCCATAGGAGGACGGAGACAGTTCCACGGGGCAAAAGAGTTGTTTCTCTCCGATCACTATGATGTACAGAGTGCCCACACCATAGAGGGTAAATGCACGGTACACTCTTTCAAGAACTACACCAAGCTTGAAAATGTCGGCGCTGAAGATTACTTTTGTCGATTTGAGTATAAAGCTGCAACTGGCGGTTTCACGCCGGACCGTGTGGCTGTGTATTGTAAGTGTGAGATGCCATACAATCCGGACGACCTGATGGTGCAGTGTGAGGGATGCAAAGACTGGTTTCATCCATCTTGCATGGGCATGTCCATTGAAGACGCAAAGAAGTTGGATCACTTTCTATGCTCCGATTGTTCTTCCGAAGATGATGCAAAAAGATCCTTGAGTGCATTTCCTGTGACGCAATCTCCGGAGGATAAGGTGAGTATGCATTTTCTGTCTGTCAATTCTCTTGCAACAAAGTGA | 1626 | 47.05 | MERGSSSSGSSFVVGFGENSCSTGSGLCSMGTGMMAPPMNNCGAEMDHKLFFPLVWNNSSTNSSNSGQRVSALLPQHHSQGVSSLMEVNNAECQNNSSNGCYLRAKIMGHPLFSRLLNSYVNCQKVGAPLEVMARLEEVCASYNAATAGGDGRSSETAGCVGEDPALDQFMEAYCEMLAKYEQELTKPFKEAMLFFSRIESQLKALEVSSVSSACRFGSSKEEGVDVVDNYIDPEAEDKDLKLQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARHKLLDWWTKHYKWPYPSEGQKVALADSTGLDLKQINNWFINQRKRHWRPSDDMQFVVMDVDHPAHYYMDTGDCVLMRPSDSDKPPYVARVEKIEADHRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCTVHSFKNYTKLENVGAEDYFCRFEYKAATGGFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFHPSCMGMSIEDAKKLDHFLCSDCSSEDDAKRSLSAFPVTQSPEDKVSMHFLSVNSLATK | 541 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 5718728 | 5723750 | + | BLOR13565 | Blo04g00653 | 59681 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g00653 | 541 | SMART | ELK_2 | 240 | 261 | IPR005539 | GO:0003677 | |
Blo04g00653 | 541 | CDD | BAH_BAHCC1 | 345 | 475 | - | - | |
Blo04g00653 | 541 | Gene3D | - | 266 | 327 | - | - | |
Blo04g00653 | 541 | Pfam | KNOX2 domain | 160 | 206 | IPR005541 | GO:0003677|GO:0005634 | |
Blo04g00653 | 541 | Pfam | PHD-finger | 459 | 507 | IPR019787 | - | |
Blo04g00653 | 541 | ProSitePatterns | Zinc finger PHD-type signature. | 460 | 505 | IPR019786 | - | |
Blo04g00653 | 541 | ProSiteProfiles | BAH domain profile. | 340 | 455 | IPR001025 | GO:0003682 | |
Blo04g00653 | 541 | Pfam | BAH domain | 344 | 454 | IPR001025 | GO:0003682 | |
Blo04g00653 | 541 | PANTHER | HOMEOBOX PROTEIN SBH1-LIKE ISOFORM X1 | 3 | 350 | - | - | |
Blo04g00653 | 541 | ProSiteProfiles | ELK domain profile. | 240 | 260 | IPR005539 | GO:0003677 | |
Blo04g00653 | 541 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 453 | 518 | IPR013083 | - | |
Blo04g00653 | 541 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 3 | 350 | - | - | |
Blo04g00653 | 541 | SMART | BAH_4 | 338 | 455 | IPR001025 | GO:0003682 | |
Blo04g00653 | 541 | SMART | KNOX2_2 | 157 | 208 | IPR005541 | GO:0003677|GO:0005634 | |
Blo04g00653 | 541 | ProSitePatterns | 'Homeobox' domain signature. | 298 | 321 | IPR017970 | GO:0000981|GO:0006355 | |
Blo04g00653 | 541 | SUPERFAMILY | Homeodomain-like | 262 | 335 | IPR009057 | - | |
Blo04g00653 | 541 | ProSiteProfiles | Zinc finger PHD-type profile. | 457 | 508 | IPR019787 | - | |
Blo04g00653 | 541 | SMART | KNOX1_2 | 101 | 145 | IPR005540 | GO:0003677|GO:0005634 | |
Blo04g00653 | 541 | SMART | PHD_3 | 459 | 506 | IPR001965 | - | |
Blo04g00653 | 541 | Gene3D | - | 338 | 452 | IPR043151 | - | |
Blo04g00653 | 541 | ProSiteProfiles | 'Homeobox' domain profile. | 260 | 323 | IPR001356 | GO:0003677 | |
Blo04g00653 | 541 | SUPERFAMILY | FYVE/PHD zinc finger | 450 | 508 | IPR011011 | - | |
Blo04g00653 | 541 | Pfam | KNOX1 domain | 103 | 141 | IPR005540 | GO:0003677|GO:0005634 | |
Blo04g00653 | 541 | CDD | homeodomain | 272 | 324 | IPR001356 | GO:0003677 | |
Blo04g00653 | 541 | Pfam | Homeobox KN domain | 280 | 319 | IPR008422 | GO:0003677|GO:0006355 | |
Blo04g00653 | 541 | Pfam | ELK domain | 240 | 261 | IPR005539 | GO:0003677 | |
Blo04g00653 | 541 | SMART | HOX_1 | 262 | 327 | IPR001356 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g00653 | Blo-Chr4:5718728 | Blo13g00994 | Blo-Chr13:32344218 | 2.29E-113 | dispersed | |
Blo19g00301 | Blo-Chr19:19356768 | Blo04g00653 | Blo-Chr4:5718728 | 4.33E-17 | dispersed | |
Blo04g00653 | Blo-Chr4:5718728 | Blo14g00016 | Blo-Chr14:112890 | 6.03E-116 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12283 | PF01426 | BAH | 8.70E-23 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g00653 | K25868 | - | zju:107417125 | 384.03 |