Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00658 ATGGCCAAAGGAAGTGGACTCTCCATTGATTCATCAGATCCATTTTGCTTCTTCCCCCACAGACCTACAGTTCTAAACTCCTTCTCTGAACACCCTTTTAACGCTCCCACCAACTGCAGAAAACTGGTTTTAATGGACACCTCCCTTCCCAGCTCTCCTTCTCGCCCATCTTCTCCCTCTCCCGCCATCCGCTTCCCCCTCAATCTCCAACACTCCCTTCCGTCGGCCTCCGATGATAAGCGGGTGATCGTAGACGAGGTGAACTTTTTTGCTGATAATAAACTCCGTGATTCCGCCATGGACGCCGATGATAAAGAAAACTCAGATGTCAGTCGCACTAAGTTGGAGCTTAACGTTAACACTGGTTTGAATCTTCTTACAACTAATACCAATAGCGACCAATCCATGGTAGACGACGGGATATCTCCTAACGTTGAGGATAAGAGAGCTAAAAATGAGTTGGTAGTCTTGCAAGCTGAGCTGGAGAGGATGAACATGGAGAATCAACGTTTAAGAGACATGCTTAGTCAAGTAAAAAACAATTACCAGGCCTTGCAGATGCATTTGGGGGTTTTGATGCAGAATAAAAAAACTGATCAAAGCGCAGAAAAAGATGTTGGTTGTAAAGGGAAGGTGGAGGAAATTAACAAGCGTAGTGGCAATGGAGGAACACTGGTTCCAAGGCAATTCATGGATCTTGGTCTCGCTACTAATGCCGATGCCGATGAACCGTCGCTGTCCTCATCGGAAGCGAATGACCGCCGGTCAGGATCGTTGGGAAATAACGGAGAAGTGGCTTCGGAAGGAGCAGCGTTCGAGAAAGACAAGAAGGAGAATAGTTCCAATCAACCTTCTCAAGAATGGGGAGCAAACAAGGTCCGGAGGTTGAATTCTGGTAAAGACGTCGATCAAACTGAGGCCACCATGAATAAGGCTCGAGTTTCCGTTAGAGCTCGATCTGAGCAGCCTATGATCACAGATGGATGTCAATGGAGGAAATATGGGCAGAAAATGGCGAAGGGAAACCCATGTCCTCGAGCTTACTATCGATGTACAATGGCCGCCGGTTGTCCGGTCCGAAAACAAGTGCAAAGATGTGCGGAAGATCGTACTATTCTCATAACAACATACGAAGGAAATCACAACCATCCCTTACCCCCGGCGGCAATGGCGATGGCCTCAACTACATCATCGGCAGCGAGAATGCTACTTACGGGATCGATGTCAAGCGCCGATCATAATCTGATGAACCCAAATTTTCTGACAAGAACTCTCCTACCTAGTTGCTCAAGCATGGCTACAATCTCAGCCTCAGCCCCATTTCCCACTATTACACTAGACCTTACTCAAACTCCCACCAACCCTTTACAATTTCAACGGCCGCCAAGCCATCTTCAAATCCCTTTTGCAAACCCACCGCCTAATTCCTCACCCACTTTGCTTCCTCAAATCTTCGGCCAGGCGCTGTACAACCAGTCGAAATTCTCTGGGCTGCAAATGTCGCAGGAGAGCGTCGGCCAATCGGGTCAACAGAGCTCGATGGCTGACACGCTCAGCGCAGCCACAGCGGCCATTACTGCCGACCCAAACTTCACGGCAGCGCTAGCCGCAGCGATCACTTCTATTATTGGAGGTGCTCATTCAAACAATGTCAGTCACAGTAATGTCAAAAACAGCGAAGCAAATAACAGTAACAGCAGCAATAAAATCAGCAGTTCCAGTTTCTCAGGGAACTGA 1737 48.13 MAKGSGLSIDSSDPFCFFPHRPTVLNSFSEHPFNAPTNCRKLVLMDTSLPSSPSRPSSPSPAIRFPLNLQHSLPSASDDKRVIVDEVNFFADNKLRDSAMDADDKENSDVSRTKLELNVNTGLNLLTTNTNSDQSMVDDGISPNVEDKRAKNELVVLQAELERMNMENQRLRDMLSQVKNNYQALQMHLGVLMQNKKTDQSAEKDVGCKGKVEEINKRSGNGGTLVPRQFMDLGLATNADADEPSLSSSEANDRRSGSLGNNGEVASEGAAFEKDKKENSSNQPSQEWGANKVRRLNSGKDVDQTEATMNKARVSVRARSEQPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMAMASTTSSAARMLLTGSMSSADHNLMNPNFLTRTLLPSCSSMATISASAPFPTITLDLTQTPTNPLQFQRPPSHLQIPFANPPPNSSPTLLPQIFGQALYNQSKFSGLQMSQESVGQSGQQSSMADTLSAATAAITADPNFTAALAAAITSIIGGAHSNNVSHSNVKNSEANNSNSSNKISSSSFSGN 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5790071 5792189 + BLOR13570 Blo04g00658 59686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00658 578 MobiDBLite consensus disorder prediction 239 319 - -
Blo04g00658 578 ProSiteProfiles WRKY domain profile. 320 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo04g00658 578 MobiDBLite consensus disorder prediction 554 578 - -
Blo04g00658 578 PANTHER OS05G0567200 PROTEIN 59 568 - -
Blo04g00658 578 MobiDBLite consensus disorder prediction 241 263 - -
Blo04g00658 578 SMART WRKY_cls 325 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo04g00658 578 SUPERFAMILY WRKY DNA-binding domain 319 386 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo04g00658 578 Gene3D WRKY domain 310 387 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo04g00658 578 Pfam WRKY DNA -binding domain 327 384 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo04g00658 578 Coils Coil 147 188 - -
Blo04g00658 578 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 59 568 IPR044810 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00154 Blo-Chr2:1349466 Blo04g00658 Blo-Chr4:5790071 0 dispersed
Blo04g00658 Blo-Chr4:5790071 Blo14g00014 Blo-Chr14:93891 4.74E-148 dispersed
Blo13g00018 Blo-Chr13:273344 Blo04g00658 Blo-Chr4:5790071 2.56E-62 dispersed
Blo15g00772 Blo-Chr15:26458224 Blo04g00658 Blo-Chr4:5790071 1.57E-54 transposed
Blo13g00406 Blo-Chr13:23662684 Blo04g00658 Blo-Chr4:5790071 0 wgd
Blo15g00484 Blo-Chr15:7923766 Blo04g00658 Blo-Chr4:5790071 5.35E-178 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12284 PF03106 WRKY 3.00E-24 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00658 - - qsu:112033147 609.372