Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00662 ATGATTCCGCCGAGGAATACGCCGCCCATGATTGGAAGGAACGCTAATGGAGGTGGATTTGGATCGTCTTCTGGCCTTAACCTTGGTCAGCTTAACATGTTGGAGGGACAGCTCCACCCGCTGGACATGACCATCAACACTTCCGATAGTGATCTTGTCCGACTCCGAGGAGATGACGATTTCGACAGCGCCACCAAATCAAGCAGCGAAAACCTTGAGGTTTTCTCTGGCGACGACCTAGACCCACGACCTAAAAAGAAGCGATACCATCGCCACACCCAGCTTCAGATCCAACAAATGGAAGCTTTCTTCAAGGAATGCCCACATCCAGATGATAAGCAAAGGAAGGAGTTGAGCAGGGAATTAAACCTGGAGCCATTGCAAGTCAAATTCTGGTTCCAAAACAAACGTACTCAAATGAAGACCCAACACGAGCGCCATGAAAACACACATCTCCGGACCGAAAATGACAAGCTTCGAGCCGATAACATGAGGTATCGAGAAGCTCTGAGTAACGCTTCATGTCCCAACTGTGGAGGCCCAACCGCCCTTGGAGAGATGTGCTTCGACGAACATCATCTCAGACTTGAAAACGCCAGGTTACGAGAAGAGATCGATCGCATGTCAGCAATAGCAGCCAAATATGTTGGCAAACCAGTGATGAACTTCCCACTTTTATCTCCACCTGTTCCATCACGTCCGCTTGAACTAGACATGGGAAACTTCGGAGGGGAGCCAGTGATAGGCGGTGACATGTATGTTGCTGGAGACATGCTCCGTTCTACCGGTGCTCTGACAGAGGCGGAAAAACCCATAATAATCGAGCTTGCGGTGGCGGCTATGGAGGAACTGATCAGAATGGCGCAGATGGGAGAGCCCTTATGGATTTCTGGCCTTGACGGATCGACCATTATGCTTAATGAAGAGGAATATACGAGAACATTTAGCAGAGGGATTGGACCAAAACGCACAGGATTTAAATGTGAAGCCTCTAGAGAAACTGTTCTCGTTATTATGAATCATGTTAACCTGGTTGAGATCCTTATGGACGTGAATCAATGGTCAACCGTGTTTTCTGGTATTGTCTCGAGAGCTGCGACGCTGGAGGTTTTGTCAACTGGAGTTGCAGGAAACTACAATGGAGCAGTCCAAGTGATGACATCAGAATTTCAAGTTTCTTCGCCGCTTGTTCCAACCCGAGAGAGTTATTACGTGAGGTATTGTAAACAGCATGGCGATGGAACATGGGTAGTCGTGGATGTTTCTATAGACCATTTACGACCGAATCCTCTATTGCGATGCCGAAGAAGGGCTTCTGGTTGCTTGATTCAAGAAATGCCGAATGGATATTCAAAGGTCACTTGGGTTGAGCACGTAGAGGTGGATGATAGAGGCGTTCATAGTCTGTACAAACAACTCGTCAATTCCGGTCATGCTTTCGGGGCCAAACGTTGGGTCGCCACCTTAGATCGACAGTGCGAAAGACTCGCCAGCGCAATGGCAACGGGCATTCCCAACGGCGATGCTGGCGTGATAACAAATCAAGAAGGGCGAAAGAGCATGCTAAAGCTAGCCGAGAGGATGGTGATAAGCTTCTGTGCTGGAGTGAGCGCCTCCACGGCTCACACGTGGACGACATTGTCCGGTACGGGGGCCGATGATGTTAGGGTTATGACTCGAAAGAGCGTAAACGATCCCGGTAGGCCTCCTGGCATCGTGCTAAGTGCGGCTACTTCTTTCTGGCTTCCTGTCCCTCCTAAAAGAGTGTTCAATTTTCTCCGGGACGAGAACTCAAGAACCGAGTATGATTATGATTGTCTAGGTATTAATGTTCTAGCTATCTGGGACATTCTTTCAAATGGAGGAGTCGTTCAGGAGATGGCACATATCGCCAATGGACGCGACACAGGCAATTGCGTGTCGTTGCTTCGAGTAAATAGCGCAAATTCAAGCCAGAGCAACATGCTGATATTACAAGAAAGTTCAACAGACCCAACAGGATCCTTTGTGATATATGCTCCCGTTGATATAGTTGCAATGAACGTGGTGCTAAATGGTGGAGACCCAGAATATGTGGCCCTTCTTCCTTCGGGATTTGCTATTCTTCCCGATGGAACAGGATCAAACGGTGGAAATGTAACTGACGGTGGGGCAGGTGGGTCACTCTTAAGCGTAGCCTTTCAGATTTTGGTTGATTCTGTCCCTACCGCAAAACTCTCTCTTGGGTCAGTCACTACAGTCAACAATCTCATTGCTTGCACTGTGGAGAGGATCAAGGCCGCTTTGTCGACCGAGAATGCTTGA 2304 48.57 MIPPRNTPPMIGRNANGGGFGSSSGLNLGQLNMLEGQLHPLDMTINTSDSDLVRLRGDDDFDSATKSSSENLEVFSGDDLDPRPKKKRYHRHTQLQIQQMEAFFKECPHPDDKQRKELSRELNLEPLQVKFWFQNKRTQMKTQHERHENTHLRTENDKLRADNMRYREALSNASCPNCGGPTALGEMCFDEHHLRLENARLREEIDRMSAIAAKYVGKPVMNFPLLSPPVPSRPLELDMGNFGGEPVIGGDMYVAGDMLRSTGALTEAEKPIIIELAVAAMEELIRMAQMGEPLWISGLDGSTIMLNEEEYTRTFSRGIGPKRTGFKCEASRETVLVIMNHVNLVEILMDVNQWSTVFSGIVSRAATLEVLSTGVAGNYNGAVQVMTSEFQVSSPLVPTRESYYVRYCKQHGDGTWVVVDVSIDHLRPNPLLRCRRRASGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYKQLVNSGHAFGAKRWVATLDRQCERLASAMATGIPNGDAGVITNQEGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVNDPGRPPGIVLSAATSFWLPVPPKRVFNFLRDENSRTEYDYDCLGINVLAIWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESSTDPTGSFVIYAPVDIVAMNVVLNGGDPEYVALLPSGFAILPDGTGSNGGNVTDGGAGGSLLSVAFQILVDSVPTAKLSLGSVTTVNNLIACTVERIKAALSTENA 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5933898 5937926 + BLOR13574 Blo04g00662 59690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00662 767 ProSiteProfiles 'Homeobox' domain profile. 83 143 IPR001356 GO:0003677
Blo04g00662 767 Gene3D - 77 159 - -
Blo04g00662 767 SUPERFAMILY Bet v1-like 514 759 - -
Blo04g00662 767 CDD homeodomain 86 144 IPR001356 GO:0003677
Blo04g00662 767 ProSiteProfiles START domain profile. 266 498 IPR002913 GO:0008289
Blo04g00662 767 SUPERFAMILY Homeodomain-like 71 143 IPR009057 -
Blo04g00662 767 MobiDBLite consensus disorder prediction 1 23 - -
Blo04g00662 767 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 41 764 IPR042160 -
Blo04g00662 767 SMART START_1 275 495 IPR002913 GO:0008289
Blo04g00662 767 Gene3D - 321 494 IPR023393 -
Blo04g00662 767 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 41 764 - -
Blo04g00662 767 Pfam Homeodomain 86 141 IPR001356 GO:0003677
Blo04g00662 767 Pfam START domain 276 495 IPR002913 GO:0008289
Blo04g00662 767 MobiDBLite consensus disorder prediction 61 92 - -
Blo04g00662 767 CDD START_ArGLABRA2_like 270 494 - -
Blo04g00662 767 SMART HOX_1 84 147 IPR001356 GO:0003677
Blo04g00662 767 ProSitePatterns 'Homeobox' domain signature. 118 141 IPR017970 GO:0000981|GO:0006355
Blo04g00662 767 SUPERFAMILY Bet v1-like 267 497 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00373 Blo-Chr2:4133203 Blo04g00662 Blo-Chr4:5933898 0 dispersed
Blo04g00662 Blo-Chr4:5933898 Blo13g00978 Blo-Chr13:32217182 0 dispersed
Blo15g00501 Blo-Chr15:8462599 Blo04g00662 Blo-Chr4:5933898 0 wgd
Blo02g00112 Blo-Chr2:830731 Blo04g00662 Blo-Chr4:5933898 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12285 PF01852 START 3.40E-59 CL0209 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00662 K09338 - pvy:116137135 1256.51