Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00667 ATGAAGATTTCGCCCTTCCTCGCCAGAGCTTCAAGAGCTTTCCATGGCTGCCCTCCATACGCTAAACTACTTGTGTTTTGCTCCCTCAGTAGTGGAGGCCTAGTAGCATACTCTGAATCACAACAAGATGTTGGTAATCCTAATGAAAAGGAACTCAAGAAAAAGAGAATTTTGGTGCTTGGAACAGGATGGGCTGGGACTAGCTTCCTAAAAGACCTCGACGCTTCGTTATATGATGTCCAGGTTGTTTCACCACGGAACTATTTTGCATTTACTCCATTGTTACCCAGTGTGACATGCGGAACGGTTGAAGCACGAAGCATAGTAGAACCAGTTCGAAACATCATAAGAAAGAGAAAAGGCGAAATTCAATTCTGTGAAGCTGAATGTGTTAAGATTGATGCTGCAAACAAGAAGGTATTCTGTCGGTCTGGGATAGACGATAGCATGGTTGAGAAGAAGGCATTTTCATTGGAATATGACTACTTGGTAATAGCAATTGGGGCACAAGTGAACACTTTTAACACTCCGGGTGTCAAGGAAAATTGTCATTTTCTCAAGGAAGTGGAAGATGCTCTTAAAATTCGCAGAAGTGTGATTGATTGCTTTGAAATGGCAGTCCTTCCTGGTCTGAGTGAAGAAGAGAGAAGAAGAAATCTTCATTTTGTTATTGTTGGAGGGGGTCCAACTGGTGTAGAATTTGCTGCTGAGCTGCACGACTTTCTTCAAGAAGATTTAGTCAAATTATACCCTATGGTCAAAGATCTGGTGAAAATTACAGTTATACAGTCAGGAGATCACATCTTGAATATGTTCGATGAAAGAATTAGCTCATTTGCTGAGCAGAAATTTTCAAGAGATGGCATTGAATTGCAAACAGGATGTCGGGTTGTAAGTGTTTCTGATAAAGAGATTACAATGAAGACGAAAGGAGAAATTTGTTCCGTACCCCATGGATTAGTTGTGTGGTCTACTGGAGTGGGGTCTCGTCCGGTGGTTAAGGACTTCATGGAGCAAATTGGCCAGGGAGGTAGGCGTGTTCTTGCAACTGATGAATGGTTGCAAGTAAAGGGCAGTGAAAACGTATATGCAATTGGTGATTGTGCCACAATTGACCAGCGTAAAATTATGGATGACGTCTCCACTATATTTAAAGCAGCGGACATCGACAACTCCGGGACCCTGACTGTTAAAGAATTCCAAGATGTAGTAGGTGACATTCTGATAAGATATCCACAGATAGAACAATATTTGAAGAGCAAACATCTGCGCAATGTGGTAGATCTGTTAAAAGATTCTGAAGGAAATGAAAGAAAGGAAATAGATATTGAAGGTTTTAAGTTGGCCCTTTCTCACGTAGACTCTCAGATGAAAGTTCTACCAGCGACTGCACAGGTTGCTGCCCAGCAGGGTGCGTATCTCTCCAAATGCTTTAACCGCAGCAGCCATTGTATTGACAATCCCGAAGGTCCTCGTCGCTTTGGTGATTCTGGGCATTATCAATTTCGTCCATTTCAGTACAAGCATTTGGGGCAATTTGCTCCTCTGGGCGGAGAACAAACAGCGGCAGAACTGCCTGGAGATTGGGTTTCCATAGGCCACAGTACTCAGTGGCTATGGTATTCTGTATATGCCAGTAAGCAAGTAAGCTGGCGAACAAGAGTTCTGGTGGTCTCTGATTGGACTAGGAGGTTTATTTTTGGAAGAGATTCTAGCCGGATATGA 1725 42.9 MKISPFLARASRAFHGCPPYAKLLVFCSLSSGGLVAYSESQQDVGNPNEKELKKKRILVLGTGWAGTSFLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIRKRKGEIQFCEAECVKIDAANKKVFCRSGIDDSMVEKKAFSLEYDYLVIAIGAQVNTFNTPGVKENCHFLKEVEDALKIRRSVIDCFEMAVLPGLSEEERRRNLHFVIVGGGPTGVEFAAELHDFLQEDLVKLYPMVKDLVKITVIQSGDHILNMFDERISSFAEQKFSRDGIELQTGCRVVSVSDKEITMKTKGEICSVPHGLVVWSTGVGSRPVVKDFMEQIGQGGRRVLATDEWLQVKGSENVYAIGDCATIDQRKIMDDVSTIFKAADIDNSGTLTVKEFQDVVGDILIRYPQIEQYLKSKHLRNVVDLLKDSEGNERKEIDIEGFKLALSHVDSQMKVLPATAQVAAQQGAYLSKCFNRSSHCIDNPEGPRRFGDSGHYQFRPFQYKHLGQFAPLGGEQTAAELPGDWVSIGHSTQWLWYSVYASKQVSWRTRVLVVSDWTRRFIFGRDSSRI 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6002453 6006743 - BLOR13579 Blo04g00667 59695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00667 574 PANTHER NADH DEHYDROGENASE 42 574 IPR045024 GO:0003954|GO:0006116
Blo04g00667 574 SUPERFAMILY FAD/NAD(P)-binding domain 54 273 IPR036188 -
Blo04g00667 574 Pfam Pyridine nucleotide-disulphide oxidoreductase 56 377 IPR023753 GO:0016491
Blo04g00667 574 SUPERFAMILY EF-hand 333 461 IPR011992 -
Blo04g00667 574 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 42 574 - -
Blo04g00667 574 SUPERFAMILY FAD/NAD(P)-binding domain 220 372 IPR036188 -
Blo04g00667 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 57 76 - -
Blo04g00667 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 160 178 - -
Blo04g00667 574 PRINTS FAD-dependent pyridine nucleotide reductase signature 221 239 - -
Blo04g00667 574 ProSitePatterns EF-hand calcium-binding domain. 388 400 IPR018247 -
Blo04g00667 574 Gene3D - 46 401 - -
Blo04g00667 574 Gene3D - 423 573 - -
Blo04g00667 574 ProSiteProfiles EF-hand calcium-binding domain profile. 375 410 IPR002048 GO:0005509
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00094 Blo04g00667 CCT
Blo04g00667 Blo15g00541 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00094 Blo-Chr2:641902 Blo04g00667 Blo-Chr4:6002453 0 dispersed
Blo04g00667 Blo-Chr4:6002453 Blo14g00081 Blo-Chr14:596192 7.29E-13 dispersed
Blo04g00667 Blo-Chr4:6002453 Blo01g00828 Blo-Chr1:13210812 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00667 K03885 - tcc:18608632 960.674