Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00689 ATGGCCAACGTCCTAGAGAGAGTATCACTTGGACTGTGCATTGCGTCGGTGAGCTTGCTGCTGGTTGGAAAAGATCTGGTCGAGTCCGCTACTCTTAAAAGCAACGTCTCGGCGGTGCATTGGCTCCCCGCGACGGCCACTTGGTACGGAAGCGCAGAAGGCGACGGAAGCGACGGAGGAGCGTGTGGGTATGGAAACTTAGTAGACGTGAAGCCATTCAGAGCAAGGGTAGGTGCAGTGAGCCCAGTCCTGTTTCAGAATGGCGAAGGGTGTGGAGCTTGCTTCAAGGTAAAGTGTCTGGACCAAACCATATGCAGTAGACGAGCCGTGACGATAATCGTGATGGACGAGTGCCCCGGTGGCTACTGTGCCGGTGGGCGAACTCACTTCGACCTCAGTGGTGCCGCCTTCGGCCGCATGGCTGTAGCCGGTGAAGGTGGTCTGCTCAGAAACCGAGGCGAAATCCCTGTCATTTACAGACGGACTCGATGCAAATATCCTGGGAAAAGCATAGCTTTCCACGTAAACGAAGGTTCAACAGATTACTGGCTCTCTCTCCTGGTTGAGTTCGAGGACGGAGATGGAGATATTGGATCGATGCACATAAGAGAAGCAAGGTCCGAGGCATGGTTGGAGATGAATCACGTTTGGGGAGCCAATTGGTGTATCATGGGAGGGCCTCTAAAAGGGCCATTTTCAGTGAAACTAACAACACTCTCTACAGCTACAAGTCTGTCAGCCAGAGACGTGATTCCAAGCAACTGGTCTCCTAAAGCTACTTATCCCTCTCGCTTGAAGTTCATCGCCTAA 810 52.84 MANVLERVSLGLCIASVSLLLVGKDLVESATLKSNVSAVHWLPATATWYGSAEGDGSDGGACGYGNLVDVKPFRARVGAVSPVLFQNGEGCGACFKVKCLDQTICSRRAVTIIVMDECPGGYCAGGRTHFDLSGAAFGRMAVAGEGGLLRNRGEIPVIYRRTRCKYPGKSIAFHVNEGSTDYWLSLLVEFEDGDGDIGSMHIREARSEAWLEMNHVWGANWCIMGGPLKGPFSVKLTTLSTATSLSARDVIPSNWSPKATYPSRLKFIA 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6286723 6288063 - BLOR13601 Blo04g00689 59717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00689 269 Gene3D - 25 164 IPR036908 -
Blo04g00689 269 PRINTS Major pollen allergen Lol pI signature 141 156 IPR005795 GO:0005576|GO:0019953
Blo04g00689 269 PRINTS Major pollen allergen Lol pI signature 239 256 IPR005795 GO:0005576|GO:0019953
Blo04g00689 269 PRINTS Major pollen allergen Lol pI signature 173 188 IPR005795 GO:0005576|GO:0019953
Blo04g00689 269 PRINTS Major pollen allergen Lol pI signature 189 204 IPR005795 GO:0005576|GO:0019953
Blo04g00689 269 PRINTS Major pollen allergen Lol pI signature 119 134 IPR005795 GO:0005576|GO:0019953
Blo04g00689 269 PRINTS Major pollen allergen Lol pI signature 79 90 IPR005795 GO:0005576|GO:0019953
Blo04g00689 269 Pfam Expansin C-terminal domain 171 252 IPR007117 -
Blo04g00689 269 SUPERFAMILY PHL pollen allergen 169 262 IPR036749 -
Blo04g00689 269 SMART dpbb_1 77 159 IPR007112 -
Blo04g00689 269 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 59 169 IPR007112 -
Blo04g00689 269 Pfam Lytic transglycolase 79 157 IPR009009 -
Blo04g00689 269 PRINTS Expansin/Lol pI family signature 152 168 IPR007118 GO:0005576
Blo04g00689 269 PRINTS Expansin/Lol pI family signature 210 224 IPR007118 GO:0005576
Blo04g00689 269 PRINTS Expansin/Lol pI family signature 40 55 IPR007118 GO:0005576
Blo04g00689 269 PRINTS Expansin/Lol pI family signature 58 76 IPR007118 GO:0005576
Blo04g00689 269 PRINTS Expansin/Lol pI family signature 249 263 IPR007118 GO:0005576
Blo04g00689 269 PRINTS Expansin/Lol pI family signature 81 99 IPR007118 GO:0005576
Blo04g00689 269 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 182 263 IPR007117 -
Blo04g00689 269 PANTHER EXPANSIN-LIKE PROTEIN B1 10 268 - -
Blo04g00689 269 Gene3D - 165 264 IPR036749 -
Blo04g00689 269 SUPERFAMILY Barwin-like endoglucanases 36 188 IPR036908 -
Blo04g00689 269 PANTHER EXPANSIN-B3 10 268 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00689 Blo-Chr4:6286723 Blo07g00054 Blo-Chr7:773870 2.32E-55 dispersed
Blo13g00371 Blo-Chr13:21519812 Blo04g00689 Blo-Chr4:6286723 1.72E-176 wgd
Blo02g00081 Blo-Chr2:558897 Blo04g00689 Blo-Chr4:6286723 3.26E-105 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00689 K20628 - pvy:116111685 427.172