Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00700 ATGAAGCGTTTTGTTTATATCAATGAAGATGAATTATCACCAAATCCTTACTGTGATAATCAGATATCAAATAGGAAATATACTTTGTTGAACTTCCTCCCAAAAAATTTATGGGAACAGTTCAGCCGCTTCATGAATCAATATTTCTTATTGATTGCTTGCCTTCAGCTCTGGCCACTTATTACTCCAGTGAATCCTGCTAGTACATGGGGTCCGCTTATCTTTATTTTTGCAGTCTCTGCAACGAAAGAGGCTTGGGATGACTACAATAGATATTTATCTGATAAGAAAGCAAATGAGAAAGAAGTTTGGGTTGTCAAGCATGGTACCAAAAAAATCATCCAAGCTCAGGATGTTTGTGTTGGAAATATAGTATGGCTCAGAGAGAATGATGAAGTGCCTTGTGATCTTGTTTTGATTGGTACCTCTGATCTGCAAGGTCTTTGTTACATAGAGACATCTGCTCTTGATGGAGAAACTGATCTAAAGACTAGGGCCACACCTTCTGCTTACGTGGGAATGGATTTTGAACTGTTGCACAAAATCAAGGGTGTTATCGAGTGTCCTAATCCAGACAAGGATATCACAAGATTTGATGCAAATATACGCTTGTTTCCTCCTTTCATTGACAATGATTTGTGTCCTTTAACCATTAAAAACACGATTCTTCAGTCCTGTTATTTACGGAACACAGAGTGGGCATGTGGAGTTGCTGTCTACACAGGCAAGTTAATCATATATGATGATGATAAAGGCCTGCTAGGTATGAGCAGGGCTGTGCCTGAACCAAAGCTTACAGCTATGGATGCAATGATTGACAAGTTAACTGGAGCTATATTTGTTTTTCAAATTGTTGTTGTTATTGTCCTGGGTATAGCTGGTAATGTATGGAAGGATACTGAAGCACGAAAGCAATGGTATGTTCTATATCCCAAAGAAGGTCCTTGGTATGAGCTGCTGGTCATCCCTCTTCGATTTGAGCTTCTCTGTTCCATCATGATTCCCATATCTATCAAGGTATCTCTGGATCTTGTGAAGAGTTTATATGCAAAGTTTATAGATTGGGATAGGGAAATGATTGATCAAGAAACTTGTACTGCATCCCATGCTACAAATACAGCAATAAGTGAAGACCTGGGGCAAGTTGAGTACATTTTGACAGATAAGACAGGCACCCTTACTGATAATAGAATGATATTTAGAAGATGTTGCATTGCCGGCATTCCCTACGGAAATGAAAGTGGGGATGCACTGAAAGATCAAGCATTGCTAAATGCTGTTGCCAAAGGCTCTCCTGACACTGTACGTTTTCTCACAGTCATGGCCATATGCAATACGGTTATACCTACGCTTAGCAAAACTGGAGATATCTTGTACAAGGCACAATCTCAGGATGAGGATGCTCTTGTTCGTGCTGCTGCTAACTTGCATATGGTTTTTTTGGCTAGAAAGGCAAATACTCTTGAGATTAAGTTCAATGGCTCAGTCATTCAGTATGAAATCCTAGAAACGCTGGAGTTCACATCTGACAGGAAAAGAATGTCAGTGGTGGTGAAAGATTGTAAGAGTGGAAAGATTGTCCTCCTATCAAAAGGAGCAGATGAAGCAATTTTTCCTAATGCATACGCTGGTCAGCAAACAAGAACCTTTGTTGAAGTTGTGGAACGATATGCACAATTGGGTCTCCGCACACTATGTTTGGCCTGGCGTGAATTGAAGGAAGAAGAATATCAAGAATGGTCTATAATGTTCAAGGACGCTAGTAGCACACTGGTTGATAGGGAGTGGAGAGTAGCAGAGGTCTGCCAAAGATTAGAGCGTAATTTGGAAGTCCTTGGAATTACTGCCATAGAAGATCGATTACAGGATGGTGTCCCAGAAACAATTGAAACATTAAGAAAAGCTGGAATAAACTTTTGGATGCTGACTGGAGACAAGCAAAGTACTGCCATTCAGATTGCTCTTTCATGCAATTTTATTTCCCCAGAGCCAAAAGGTCAGCTTTTATTAATTGATGGAAAGACAGAAGATGACGTTCATAGAAGTTTAGTTAGAGTGCTACTTACAATGAAGACAACAATGTCAGAACCGAAGGATGTTGCTTTTGTTGTTGATGGATGGGCTCTTGAAATTTTACTTAAGCATAATCGGAAAGCTTTCACTGAATTAGCTATATTATCAAGAACTGCCATATGCTGTCGCGTGACGCCATCACAAAAGGCACAGCTTGTGGAGCTCTTAAAATCATGTGACTATAGAACATTAGCTGTTGGGGATGGCGGGAATGATGTAAGGATGATTCAACAAGCTGACATTGGAGTTGGGATTAGTGGGAGAGAAGGGTTACAGGCTGCAAGGGCGGCCGATTATAGCATAGGAAAGTTCAGGTTTTTAAAAAGATTGATACTTGTTCATGGCCGATATTCATATAACCGCACAGCATTTTTGTCTCAGTATTCATTTTACAAATCCTTACTGATTTGTTTTATCCAAATTTCTTTCTCTTTCATTTCAGGGGTCTCTGGAACCAGTCTATTTAATTCTGTTAGCTTGATGGCTTATAATGTTTTCTACACCAGTATTCCTGTTTTAGTTAGCGTTCTTGACAAAGATCTTAGTGAAGAAACAGTGATGCAGCATCCTCAAATTTTATTTTACTGCCAAGCAGGGAGGCTTCTAAATCCAAGCACATTTGCTGGGTGGTTTGGTCGATCTTTGTACCATGCAAATGTGGTATTTATAATTAGCATACATGCCTATGCTAATGAAAAAAGTGAAATGGAGGAGCTTTCAATGGTTGCTCTCTCTGGATGTATCTGGTTACAAGCTTTTGTTGTGACGCTGGAGACCAATTCATTCACTATTTTGCAACATCTAGCAATATGGGGGAATTTAGCTGCCTTCTACATCATCAACTGGATCTTCAGCGCCATTCCTTCATCTGGAATGCATACTATCATGTTTCGGCTCTGTGGACAACCGTCATACTGGATAACTATGTTTCTTATTGTGGCAGTGGGGATGGGTCCAATTCTAGCTCTCAAGTATTTGAGATTCACATACACACCAAGCAAGATCAACACACTTCAGCAGGCAGAGCGTATGGGTGGGCCTATTCTGACCCTCGGAAACATTGAGCCGCAGCCAAGATCATTGGATAAGGAGGTGTCCCCTCTCTCAATAACACTACCCATGAAAAGAAACCCAGTTTACGAGCCTTTACTTTCAGACTCACCAAATTCTACGCGGAGGTCTTTTGGATCAGGAACACCCTTTGATTTCTTTCACTCACAATCCAGATTGTCATCCTCGAGCTACTTGAGAAATTGTAAAGATAACTGA 3342 40.39 MKRFVYINEDELSPNPYCDNQISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKHGTKKIIQAQDVCVGNIVWLRENDEVPCDLVLIGTSDLQGLCYIETSALDGETDLKTRATPSAYVGMDFELLHKIKGVIECPNPDKDITRFDANIRLFPPFIDNDLCPLTIKNTILQSCYLRNTEWACGVAVYTGKLIIYDDDKGLLGMSRAVPEPKLTAMDAMIDKLTGAIFVFQIVVVIVLGIAGNVWKDTEARKQWYVLYPKEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDREMIDQETCTASHATNTAISEDLGQVEYILTDKTGTLTDNRMIFRRCCIAGIPYGNESGDALKDQALLNAVAKGSPDTVRFLTVMAICNTVIPTLSKTGDILYKAQSQDEDALVRAAANLHMVFLARKANTLEIKFNGSVIQYEILETLEFTSDRKRMSVVVKDCKSGKIVLLSKGADEAIFPNAYAGQQTRTFVEVVERYAQLGLRTLCLAWRELKEEEYQEWSIMFKDASSTLVDREWRVAEVCQRLERNLEVLGITAIEDRLQDGVPETIETLRKAGINFWMLTGDKQSTAIQIALSCNFISPEPKGQLLLIDGKTEDDVHRSLVRVLLTMKTTMSEPKDVAFVVDGWALEILLKHNRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAVGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLYHANVVFIISIHAYANEKSEMEELSMVALSGCIWLQAFVVTLETNSFTILQHLAIWGNLAAFYIINWIFSAIPSSGMHTIMFRLCGQPSYWITMFLIVAVGMGPILALKYLRFTYTPSKINTLQQAERMGGPILTLGNIEPQPRSLDKEVSPLSITLPMKRNPVYEPLLSDSPNSTRRSFGSGTPFDFFHSQSRLSSSSYLRNCKDN 1113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6403840 6416117 - BLOR13612 Blo04g00700 59728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00700 1113 SFLD p-type atpase 370 808 IPR044492 -
Blo04g00700 1113 Gene3D - 425 590 IPR023299 GO:0000166
Blo04g00700 1113 Gene3D - 75 244 - -
Blo04g00700 1113 ProSitePatterns E1-E2 ATPases phosphorylation site. 388 394 IPR018303 -
Blo04g00700 1113 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 393 577 IPR023299 GO:0000166
Blo04g00700 1113 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 434 1030 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Blo04g00700 1113 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 394 1112 - -
Blo04g00700 1113 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 11 337 - -
Blo04g00700 1113 Pfam Phospholipid-translocating P-type ATPase C-terminal 785 1024 IPR032630 -
Blo04g00700 1113 SUPERFAMILY Calcium ATPase, transduction domain A 100 242 IPR008250 -
Blo04g00700 1113 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 394 1112 - -
Blo04g00700 1113 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 11 337 - -
Blo04g00700 1113 SUPERFAMILY HAD-like 375 801 IPR036412 -
Blo04g00700 1113 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 723 841 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo04g00700 1113 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Blo04g00700 1113 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 1023 IPR023298 -
Blo04g00700 1113 Pfam E1-E2 ATPase 99 163 - -
Blo04g00700 1113 Pfam Cation transport ATPase (P-type) 443 540 - -
Blo04g00700 1113 PRINTS P-type cation-transporting ATPase superfamily signature 635 645 - -
Blo04g00700 1113 PRINTS P-type cation-transporting ATPase superfamily signature 152 166 - -
Blo04g00700 1113 PRINTS P-type cation-transporting ATPase superfamily signature 757 776 - -
Blo04g00700 1113 PRINTS P-type cation-transporting ATPase superfamily signature 386 400 - -
Blo04g00700 1113 Gene3D - 609 797 IPR023214 -
Blo04g00700 1113 SFLD C1.7: P-type atpase like 370 808 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00700 Blo-Chr4:6403840 Blo11g00712 Blo-Chr11:8497267 0 dispersed
Blo16g00563 Blo-Chr16:23058144 Blo04g00700 Blo-Chr4:6403840 4.37E-15 dispersed
Blo04g00700 Blo-Chr4:6403840 Blo13g00955 Blo-Chr13:31961219 5.16E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00700 K01530 - tcc:18608746 1944.09