Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo04g00711 | ATGGCATCCAATGAAGGATTTCTTACGGATGAGCAGCGGGAAAAGTTAAAAATAGCAAGCCTCAATGTGGAGAATTTTTCGTCATCTCCAAAATCTCCTACATCCTTGCTTCCTGAGCATTTTGTAAAGGCACCGACAGGTGGTAAAGCACCAACTGCTGGGATTGCTGTGAGACATGTCCGAAGGTCACATTCAGGAAAGTTTGTGCGAGTGAAGAAGGATGGAGCTGGTGGTAAGGGTACATGGGGGAAGCTACTTGACACTGATGGTGAATCTCATGTTGATAGGAATGATCCTAATTATGACAGTGGCGAGGAGCCATATCAACTTGTTGGATCAACTATTTCCGACCCCTTGGATGAATACAAGAAATCTGTTGTCTCTATGATAGAGGAATACTTCAGTAATTGCGTTGTAGAATTAACAGCATCTGAACTAAAAGAACTAGGCTCAAGTGAATACCATCCTTATTTTATAAAACGGCTGGTTTCAATGGCAATGGATAGGCATGACAGGGAGAAGGAAATGGCCTCCGTTCTACTTTCATCTTTATATGCTGATGTTATCAGTCCTGCCCAAATTAGAGATGGGTTTTTCATGCTGCTTGAATCAGCTGATGATCTTGCTGTGGACATATTGGACACAGTTGATATACTTGGTTTGTTCCTAGCTCGAGCTGTGGTTGATGACATCCTTCCTCCAGCTTTTCTTACTAGAGCTAAAAAAGCACTCCAAGAATCTTCCAAAGGGTTTCAGGTTATACAAACAGCGGAGAAAAGCTATTTGTCTGCTCCGCATCATGCTGAACTTATAGAGAAGAAATGGGGTGGCTGTACTCACATTACAGTTGAGGAAGTGAAGAAGAAGATTGCTGATCTTTTGAGGGAATATGTTGAAAACGGAGATACTTTTGAAGCTTGTAGATGCATAAGGGAATTGGGTGTTTCATTCTTTCATCATGAGGTTGTAAAGCGGGCATTAATTCTTGCAATGGAAATTAGAACAGCAGAGCCATTGATAATGAAGCTGCTAAAGGAAACTGCTGAGGAAGGTCTTATCAGTTCCAGTCAGATGGTGAAAGGGTTTTCTCGTCTGGCTGAGAGCCTTGATGACCTTGCTCTTGACATTCCATCTGCAAAATCCCTGTTCCAATCTCTCATTCCTCGGGCCATATCAGAAGGATGGCTTGATGCTTCATTTATGACTTGTTCAAAGGAAGATGGAGGTGAACAGGGCAACGATGAAAAGGTGAAGCGCTATAAGGCAGAAGCTGTGGCTATAATTCACGAATATTTTTTATCAGATGATATTCCTGAATTAATTCGGAGCCTTGAAGATTTCGGGGCACCAGAATATAACCCAATATTTTTGAAGAAGTTGATCACCCTTGCTTTGGACAGAAAGAACAGAGAAAAAGAAATGGCTTCTGTCCTTCTGTCTGCTCTTCACATTGAGATCTTCTCTACTGAAGATATTGTTAATGGTTTTACGATGCTTCTGGAGTCTGCAGAAGACACAGCACTTGACATTTTAGATGCTTCTAATGAGCTTGCACTCTTTCTGGCCAGGGCTGTCATCGATGACGTCTTGGCTCCACTGAATCTAGAGGAGATTGCTATCAGGTTGCCTTCCGTTTGTGCTGGTAACGAGACAATTCGAATGGCACAATCTCTTATTGCTGCGCGTCATGCTGGTGAGAGGTTGCTGAGGTGTTGGGGTGGTGGAACTGGATGGGCAGTTGAAGATGCAAAGGACAAGATACAGAAACTTTTGGAGGAGTACGAAAGTGGAGGTGTCTTGGGTGAAGCTTGCCAGTGCATTCGCGACCTTGGGATGCCTTTCTTCAACCATGAGGTAGTGAAAAAGGCATTAGTTATGGCCATGGAAAAGAAAAACGATGGAATGCTCGATCTTTTGCAGGAGTGTTTTGGGGAAGGTCTCATCACTATCAATCAAATGACCAAAGGCTTCACTCGCATCAAAGACGGGCTTGACGACCTAGCTCTTGACATCCCAAATGCAAAAGAGAAATTCAACTTCTACCTTGAGCACGCCCAGAAGAAAGGATGGCTCTTACCTTCCTTTGCATCTTCCATTAGGAACTAG | 2106 | 43.21 | MASNEGFLTDEQREKLKIASLNVENFSSSPKSPTSLLPEHFVKAPTGGKAPTAGIAVRHVRRSHSGKFVRVKKDGAGGKGTWGKLLDTDGESHVDRNDPNYDSGEEPYQLVGSTISDPLDEYKKSVVSMIEEYFSNCVVELTASELKELGSSEYHPYFIKRLVSMAMDRHDREKEMASVLLSSLYADVISPAQIRDGFFMLLESADDLAVDILDTVDILGLFLARAVVDDILPPAFLTRAKKALQESSKGFQVIQTAEKSYLSAPHHAELIEKKWGGCTHITVEEVKKKIADLLREYVENGDTFEACRCIRELGVSFFHHEVVKRALILAMEIRTAEPLIMKLLKETAEEGLISSSQMVKGFSRLAESLDDLALDIPSAKSLFQSLIPRAISEGWLDASFMTCSKEDGGEQGNDEKVKRYKAEAVAIIHEYFLSDDIPELIRSLEDFGAPEYNPIFLKKLITLALDRKNREKEMASVLLSALHIEIFSTEDIVNGFTMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIAIRLPSVCAGNETIRMAQSLIAARHAGERLLRCWGGGTGWAVEDAKDKIQKLLEEYESGGVLGEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDGMLDLLQECFGEGLITINQMTKGFTRIKDGLDDLALDIPNAKEKFNFYLEHAQKKGWLLPSFASSIRN | 701 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 6536445 | 6539117 | - | BLOR13623 | Blo04g00711 | 59739 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo04g00711 | 701 | MobiDBLite | consensus disorder prediction | 80 | 106 | - | - | |
| Blo04g00711 | 701 | MobiDBLite | consensus disorder prediction | 25 | 49 | - | - | |
| Blo04g00711 | 701 | SUPERFAMILY | ARM repeat | 416 | 575 | IPR016024 | - | |
| Blo04g00711 | 701 | PANTHER | PROGRAMMED CELL DEATH 4 | 1 | 694 | IPR039778 | GO:0045892 | |
| Blo04g00711 | 701 | ProSiteProfiles | MI domain profile. | 419 | 540 | IPR003891 | - | |
| Blo04g00711 | 701 | SUPERFAMILY | ARM repeat | 119 | 279 | IPR016024 | - | |
| Blo04g00711 | 701 | MobiDBLite | consensus disorder prediction | 86 | 102 | - | - | |
| Blo04g00711 | 701 | Gene3D | - | 272 | 406 | - | - | |
| Blo04g00711 | 701 | Gene3D | - | 570 | 700 | - | - | |
| Blo04g00711 | 701 | Gene3D | - | 116 | 262 | - | - | |
| Blo04g00711 | 701 | Gene3D | - | 409 | 562 | - | - | |
| Blo04g00711 | 701 | PANTHER | PROGRAMMED CELL DEATH PROTEIN 4-LIKE | 1 | 694 | - | - | |
| Blo04g00711 | 701 | SUPERFAMILY | ARM repeat | 282 | 402 | IPR016024 | - | |
| Blo04g00711 | 701 | ProSiteProfiles | MI domain profile. | 121 | 242 | IPR003891 | - | |
| Blo04g00711 | 701 | Pfam | MA3 domain | 584 | 691 | IPR003891 | - | |
| Blo04g00711 | 701 | Pfam | MA3 domain | 422 | 530 | IPR003891 | - | |
| Blo04g00711 | 701 | Pfam | MA3 domain | 123 | 233 | IPR003891 | - | |
| Blo04g00711 | 701 | Pfam | MA3 domain | 286 | 397 | IPR003891 | - | |
| Blo04g00711 | 701 | SUPERFAMILY | ARM repeat | 579 | 699 | IPR016024 | - | |
| Blo04g00711 | 701 | ProSiteProfiles | MI domain profile. | 582 | 701 | IPR003891 | - | |
| Blo04g00711 | 701 | ProSiteProfiles | MI domain profile. | 285 | 406 | IPR003891 | - | |
| Blo04g00711 | 701 | SMART | ma3_7 | 122 | 233 | IPR003891 | - | |
| Blo04g00711 | 701 | SMART | ma3_7 | 286 | 397 | IPR003891 | - | |
| Blo04g00711 | 701 | SMART | ma3_7 | 420 | 531 | IPR003891 | - | |
| Blo04g00711 | 701 | SMART | ma3_7 | 583 | 692 | IPR003891 | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo04g00711 | - | - | - | tcc:18605022 | 1198.34 |
WGDs- Genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo04g00711 | Blo16g00247 | BCT |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo04g00711 | Blo-Chr4:6536445 | Blo14g00603 | Blo-Chr14:10434329 | 1.11E-07 | dispersed | |
| Blo16g00247 | Blo-Chr16:5687818 | Blo04g00711 | Blo-Chr4:6536445 | 5.03E-71 | wgd |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi17g883 | Blo04g00711 | Blo16g00247 | . | . | . | . | Bma06g00241 | . | Cmo13g00804 | Cmo18g00181 | . | . | . | . | . | Cpe20g00337 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone2ag0946 | Cone16ag0054 | Cone13ag0195 | Cone19ag0188 | Lsi02g00460 | Csa01g00918 | . | Cme12g01630 | . | . | Bda11g01627 | Bda14g00784 | . | Bpe15g00662 | . | . | Sed08g2468 | . | . | Cma13g00774 | Cma18g00205 | Car13g00620 | Car18g00200 | Cpe09g00991 | . | Bhi08g01687 | Tan05g2890 | Cmetu12g0918 | Lac10g0533 | Hepe07g2167 | . | . | Cla03g00317 | Cam03g0335 | . | . | Clacu03g0336 | Cmu03g0942 | Cre03g0636 | . | . | . | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0003831 | 3 | 1 | 2 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 4 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 2 | 1 | 45 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Blo04g00711 | Blo_Chr04 | FPKM | 15.031286 | 17.806059 | 18.643055 | 18.788149 | 16.009186 | 16.773363 | 16.247334 | 29.404968 | 28.176008 | 27.418865 |