Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g00712 | AAAACCTACTGCATTTTCTTTCTTTTTCGCAGAAGCATCAATGGCTCCAGGGGAGACCTTGGGTACCTCTCTTGCGGCACCGGAAACCCTATCGACGATTGCTGGCGGTGCGACCCGAAATGGGAAAACAATCGACAGCGCCTAGCCGATTGCGCAATCGGGTTCGGCAAAAACGCCGTCGGAGGCCGCGACGGTAGGATCTACGTAGTCACTGACGATGGCGACGACGACCCAGTGAAGCCGAAACCCGGTACACTCCGATACGCAGTGATTCAAGACGAACCGCTCTGGATAATTTTCGACAGTGACATGGTGATAAAACTGAAAGAAGAACTGATAATGAATTCTTTCAAAACCATCGATGGGAGAGGGGCCAACGTCCATATTTCCGGGGGACCTTGCATTACGATACAATTCGTGACAAATATTATCATCCACGGTCTCCATATCCAAGACTGTAAGCAAGGGGGGAATGCTTACGTGCGGGACTCCCCACAACACTATGGGTGGAGAACTGTATCGGACGGAGATGGGGTTTCAATCTTCGGTGGTAGCCATGTTTGGGTCGATCATTGCTCTTTGTCGAACTGTAACGACGGCCTGATCGATGCGATTCATGGGTCTACGGCTATTACGATTTCAAATAATTATATGACACATCATAATAAGGTAATGTTGTTAGGTCACAGCGATTCATTCAGTCTGGACAAGAACATGCAGGTCACCATTGCCTTTAATCACTTTGGAGAAGGCCTAATACAAAGAATGCCCAGGCAAACTTTTGAATTTAATCAAGTCAATAAAATGTGCAGGTGTAGGCATGGGTATTTTCATGTGGTCAACAACGACTACACCCATTGGGAAATGTATGCCATTGGAGGGAGCGCATCCCCTACGATCAATAGCCAAGGCAACCGATTTCTTGCCCCAGACGACAGATTCAACAAAGAGGTGACGAAGCGTGAGGATGCACCGGAGAGCGACTGGAAGGGATGGAATTGGAGGTCGGAGGGAGACTTGTTGTTAAACGGTGCGTTTTTCACGGAATCTGGGGCTGGAGCTTCTTCAAGCTATGCTAAAGCTTCGAGCTTGGGTGCTAGGCCATCTACCCTAGTTGGTTCCATTACAGTGGGCGCGGGTGCACTCGATTGCAAGAGGGGCTCGCGCTGC | 1170 | 49.32 | KTYCIFFLFRRSINGSRGDLGYLSCGTGNPIDDCWRCDPKWENNRQRLADCAIGFGKNAVGGRDGRIYVVTDDGDDDPVKPKPGTLRYAVIQDEPLWIIFDSDMVIKLKEELIMNSFKTIDGRGANVHISGGPCITIQFVTNIIIHGLHIQDCKQGGNAYVRDSPQHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDSFSLDKNMQVTIAFNHFGEGLIQRMPRQTFEFNQVNKMCRCRHGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRFLAPDDRFNKEVTKREDAPESDWKGWNWRSEGDLLLNGAFFTESGAGASSSYAKASSLGARPSTLVGSITVGAGALDCKRGSRC | 390 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6558464 | 6559778 | + | BLOR13624 | Blo04g00712 | 59740 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g00712 | 390 | PRINTS | Pollen allergen Amb family signature | 111 | 127 | IPR018082 | - | |
Blo04g00712 | 390 | PRINTS | Pollen allergen Amb family signature | 332 | 356 | IPR018082 | - | |
Blo04g00712 | 390 | PRINTS | Pollen allergen Amb family signature | 361 | 384 | IPR018082 | - | |
Blo04g00712 | 390 | PRINTS | Pollen allergen Amb family signature | 290 | 309 | IPR018082 | - | |
Blo04g00712 | 390 | PRINTS | Pollen allergen Amb family signature | 268 | 287 | IPR018082 | - | |
Blo04g00712 | 390 | PRINTS | Pollen allergen Amb family signature | 75 | 100 | IPR018082 | - | |
Blo04g00712 | 390 | PRINTS | Pollen allergen Amb family signature | 51 | 68 | IPR018082 | - | |
Blo04g00712 | 390 | PANTHER | PECTATE LYASE 18-RELATED | 13 | 387 | IPR045032 | GO:0030570 | |
Blo04g00712 | 390 | Pfam | Pectate lyase | 109 | 307 | IPR002022 | - | |
Blo04g00712 | 390 | Gene3D | - | 28 | 383 | IPR012334 | - | |
Blo04g00712 | 390 | SUPERFAMILY | Pectin lyase-like | 14 | 382 | IPR011050 | - | |
Blo04g00712 | 390 | PANTHER | PECTATE LYASE | 13 | 387 | - | - | |
Blo04g00712 | 390 | SMART | amb_all | 103 | 313 | IPR002022 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo04g00712 | Blo16g00243 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g00712 | Blo-Chr4:6558464 | Blo14g00306 | Blo-Chr14:3136127 | 0 | dispersed | |
Blo16g00243 | Blo-Chr16:5643367 | Blo04g00712 | Blo-Chr4:6558464 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g00712 | K01728 | - | pop:7494805 | 676.781 |