Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00714 ATGAGGTTCAGCAGAGACAGCGTAAGGGAAATCAAAGGGTCAGCTACCATGCAGAGAAAACCATCAAACACTAAACAAAAGCCAGATAGCATTCCTGTCCCCGACCTCACGGATTTTATGAACGACATGTTTTTCGGAGGTGTGAAAACGGAGAAGAAGGCTTATAATTTGACCGGAAACGATGAAATAGACGAGGAGGAAGATGATTTGTTCGAGCGTAGCAATAGGAGCAGCAGCAGTAGGAATATGACTCAAGATTGGCTACAAGAGGCTCGTCGCATGGTCGCTTCGTCTCCTGCTCGATGCGACTCGCCCTCTCGCCTCGTAGGGTCACCAAGATTTGCGGCGGCTCACGAGAGATCGTCTGCTTCGCTACTTGATCGCCGAGACCCGTTGTCGAGGTCTGCAAGAAGACACCGAGCAGTGGACAGCTTCAGTGGAGAAATCGTACTAAAATCAGAAAAACACAGACGCAACAATTCAGAAACCTTCTCCTCGGCCACCACCACACCCGTGGGGGATCAACCATCTCCATCTTCCGCCGTCCAAAAATGGTTCTCCAACTTCCTCAAACCTCAAGACCCTACCCCTTTATCTTCTCAGCCACAGCCACCCATGTCCAATCCTCCACCCCTTATTCTCCCTCCTCGCCAATCGATTCATCGGAAATCCCGCTTCCAAACAGACCCATCCAGCAGGAGCTTCACGAATCCGGCGCCACTGTCAGATACCCGTATGCTCTCTCCCCCCAAAAACCTCGTTGAATCGATTAGCCGGCGATCGATATCATCGTCAACGTGTTCTGTCGAGAAGACAAGGTATAAATCTGCAAATGGTACCCTGAAAGAAGGAGAAAAATCAGCTGATTGTAGTCTGAACGGATTTCTGAAAGAGCAGAGAAATAGAATTTCGAAAATCATTAGTGGGGAAGTTGATGCCAAGGCTAAAATCATTCTCTCTGGGCCCTCAAACAGTACGAGCTCGATGGTAGCGGCTGTTTGCTATGCATGGCTGATGGAGACCAGGATGAAGAGTAACAACAATAAGGTGATGGACGAAGATGAAGACGAAGACGATCTCGTGGTGGTGCCAGTGATGAATGTGAAGAGGGAGAGGATGTGGAAGCACCGGCAGGCCGCTTGGTTCTTTGACCACGTTGGTCTTGATGCTACCTCTTTGCTTTTCACCGATGAGGTGAACTTGGAAAGGTTGATGATAGACGGAAGACTAAGCATACTTGTAGTTGGACAAGATGTTCTTAGAAGTAATGGAGAGAATGGATCTCAATGCACTATTCTCACAGACAACTACTGTGAATATGCTTACGATCTGCTCCAAACCATGGAGTTGAAGAAGCTTTTGCTTTCTGGTATTCTTTTGGACACGAAGAATTTGGATTCGTCGATGACAAGAGATGCAGAAGCAGTCCAGCTTCTTCTGGTTGGTTCCAACCCCAATTACAGGAACACGCTTTATGATCAATTGATGCAAGATCACAGGGAAAGTTCATTTCTTGAAGTGTTGCAGCAGAGATATGGGAAGCAGCCTACTACTGCATTGCCAGGTGGGCAGGTTGGTGTTTCGGACAGAAGAACATCCGCTGTTTCTCGTCATGAAGACTCTCTGCAAAATGCAGAAAAGAAATCTAAGAACAAAATTAAAAAGGATTCCCCAAAATCAGATAAACCTACAGCACTGCCTCAAGCTCCAGCAGCTACATCAGTGCAAGGAGCAGCAGATTCATCTCGGGGGAAAAACAAATTTTCTCTCCCAAAATGGTTAGGTTTTGGATCGAAATAA 1800 47.06 MRFSRDSVREIKGSATMQRKPSNTKQKPDSIPVPDLTDFMNDMFFGGVKTEKKAYNLTGNDEIDEEEDDLFERSNRSSSSRNMTQDWLQEARRMVASSPARCDSPSRLVGSPRFAAAHERSSASLLDRRDPLSRSARRHRAVDSFSGEIVLKSEKHRRNNSETFSSATTTPVGDQPSPSSAVQKWFSNFLKPQDPTPLSSQPQPPMSNPPPLILPPRQSIHRKSRFQTDPSSRSFTNPAPLSDTRMLSPPKNLVESISRRSISSSTCSVEKTRYKSANGTLKEGEKSADCSLNGFLKEQRNRISKIISGEVDAKAKIILSGPSNSTSSMVAAVCYAWLMETRMKSNNNKVMDEDEDEDDLVVVPVMNVKRERMWKHRQAAWFFDHVGLDATSLLFTDEVNLERLMIDGRLSILVVGQDVLRSNGENGSQCTILTDNYCEYAYDLLQTMELKKLLLSGILLDTKNLDSSMTRDAEAVQLLLVGSNPNYRNTLYDQLMQDHRESSFLEVLQQRYGKQPTTALPGGQVGVSDRRTSAVSRHEDSLQNAEKKSKNKIKKDSPKSDKPTALPQAPAATSVQGAADSSRGKNKFSLPKWLGFGSK 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6584818 6587543 + BLOR13626 Blo04g00714 59742

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00714 599 MobiDBLite consensus disorder prediction 567 583 - -
Blo04g00714 599 PANTHER - 12 232 - -
Blo04g00714 599 PANTHER - 231 597 - -
Blo04g00714 599 SUPERFAMILY DHH phosphoesterases 380 509 IPR038763 -
Blo04g00714 599 MobiDBLite consensus disorder prediction 229 249 - -
Blo04g00714 599 MobiDBLite consensus disorder prediction 16 30 - -
Blo04g00714 599 PANTHER BNIP - RELATED 12 232 - -
Blo04g00714 599 PANTHER BNIP - RELATED 231 597 - -
Blo04g00714 599 MobiDBLite consensus disorder prediction 515 599 - -
Blo04g00714 599 MobiDBLite consensus disorder prediction 58 249 - -
Blo04g00714 599 MobiDBLite consensus disorder prediction 197 216 - -
Blo04g00714 599 Coils Coil 535 555 - -
Blo04g00714 599 MobiDBLite consensus disorder prediction 122 161 - -
Blo04g00714 599 MobiDBLite consensus disorder prediction 532 561 - -
Blo04g00714 599 MobiDBLite consensus disorder prediction 1 34 - -
Blo04g00714 599 MobiDBLite consensus disorder prediction 162 196 - -
Blo04g00714 599 Gene3D - 422 500 - -
Blo04g00714 599 Gene3D - 287 421 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00714 - - - jre:108984279 588.571
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00714 Blo-Chr4:6584818 Blo08g00236 Blo-Chr8:2920526 1.07E-09 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g840 Blo04g00714 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone2ag0935 Cone16ag0068 . . Lsi02g00420 . Chy12g01234 Cme12g01657 . . . Bda14g00792 . Bpe15g00657 . . . . . . . . Car18g00189 Cpe09g00998 . Bhi08g01668 Tan05g1957 . Lac10g0498 . . . Cla03g00291 Cam03g0309 Cec03g0304 Cco03g0317 Clacu03g0310 Cmu03g0920 Cre03g0611 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004587 2 3 1 0 1 1 1 1 1 2 1 1 1 1 2 1 1 2 1 1 1 1 1 1 1 2 1 1 4 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo04g00714 Blo_Chr04 FPKM 9.911401 10.824209 12.993421 14.994043 13.473811 13.214856 14.804383 21.373632 19.444494 19.394505