Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00716 ATGCCCCAGGATTTTCCGTCTGAGCAAGAACCTGACGATTCTGATTCGGAGTTTGTTGAAATTGATCCTACTGGGCGATATGGACGGTATAAGGAGGTTCTAGGAAAAGGAGCTTTCAAGAAAGTATATCGAGCTTTTGATGAATGGGAAGGGATTGAAGTAGCTTGGAATCAGGTGAAGGTGGCAGATCTATTGAGGAATTCTGATGATTTGGAGCGTTTGTATTCGGAAGTTCATTTGCTCAAGACTTTGAAGCATAAGAATATAATTAAATTTTACAATTCTTGGGTTGATACTAAACATGAAAACATCAACTTCATCACTGAGATTTTCACTTCAGGAACACTTAGACAATATAGAAAGAAACATAAGCATGTTGATTTGAGGGCGTTAAAGAAATGGTCTAGGCAGATTCTCGAGGGTCTTTTGTATCTCCACAGTCACGATCCTCCCGTTATCCACCGAGATTTGAAGTGTGATAACATTTTTGTCAATGGAAACCAAGGCGAGGTGAAAATCGGTGACTTAGGACTTGCTGCCATTCTTCAGCAAGCTCGTTTAGCTCACAGTGTCATTGGTACCCCAGAGTTCATGGCACCAGAGCTTTATGAAGAGGAATATGACGAGCTTGTAGACATTTATGCCTTTGGAATGTGTTTGTTAGAGTTAGTAACTTTTGAATATCCTTATGTTGAATGTGCAAATGCTGCTCAAATATTCAAGAAAGTGACATCAGGAATAAAGCCAGCATCATTGGCTAAAGTAACTGATCCTGGTGTCAGAGAATTTATAGAAAAATGTATTGCAAATGTATCTGAGAGGTTGTCAGCTAAGGAACTGCTAAGAGATCCCTTCCTCCAGTCAGATGATGATAATGGAAGTGTATCTCGATCTTTACAATCCAAAGTTCAGTCTGCAGGTGATAGCTCGAGAAATAATGATGCACCTGTTGAGACAAGTAGAGACTTTACTGTGCAGGGTCAGAGGAAAGACATTCACACAATATTTCTCAAACTGCGTATAGCGGACTCTTCAGGTAGTTTCCGCAACATCCATTTCCCGTTTGATATCCAAGCAGATACAGCCATAGCTGTTGCCAGCGAAATGGTGGATGAATTAGACCTAACAGATCAAGATGTTTCTACTATTGCTCAAATGATTCAATCTGAAGTTCAGTCCCACATTCCAGATTGGACACCCGGACTATCTCTTAACAATTCAGTAGGAGAAGCTGCAATTTTAGATTGTCATGCCTCTGAAATAAAAAATGATGCTTCTCCTTCAGTTCACGAGCCCCTTCCTTCTGGAAATCTTGCTTTGGAAAGAACTCCTTCTGGTCGGAAGTATTGGTCTGACTCTCCCAAAGGACTTGGTGAAATCTCTCCCAAGCCAGGCCCTTCAACCCTGTCTTTTCATTTGGATTTAGTCGAAGAAGATAATCAAAATGATGCGATGTCAAATGCTGGTTCTACATCAGAGATTCTGAATGAAGAGGACATTCAAGAGAACTATGAAATGTCGGAAGACATTGAATCAGTGGAAGAAAAGATAATCGCTGAGAGGCTTGAAAATCTGTTACAGCAGCAGCAGCAGGAGTTGGACGATTTAAAAAGGAAGCATGAAGAGGCCATATCAGAGATTTTGAAAGAAATAAATCCGGAAATCTGCAAAAGAATCACAAACAAGTTAAAGCTGGAAACCCCTGAAAATTACTGGTAA 1719 40.37 MPQDFPSEQEPDDSDSEFVEIDPTGRYGRYKEVLGKGAFKKVYRAFDEWEGIEVAWNQVKVADLLRNSDDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKHENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQARLAHSVIGTPEFMAPELYEEEYDELVDIYAFGMCLLELVTFEYPYVECANAAQIFKKVTSGIKPASLAKVTDPGVREFIEKCIANVSERLSAKELLRDPFLQSDDDNGSVSRSLQSKVQSAGDSSRNNDAPVETSRDFTVQGQRKDIHTIFLKLRIADSSGSFRNIHFPFDIQADTAIAVASEMVDELDLTDQDVSTIAQMIQSEVQSHIPDWTPGLSLNNSVGEAAILDCHASEIKNDASPSVHEPLPSGNLALERTPSGRKYWSDSPKGLGEISPKPGPSTLSFHLDLVEEDNQNDAMSNAGSTSEILNEEDIQENYEMSEDIESVEEKIIAERLENLLQQQQQELDDLKRKHEEAISEILKEINPEICKRITNKLKLETPENYW 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6599069 6601765 + BLOR13628 Blo04g00716 59744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00716 572 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Blo04g00716 572 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 7 569 - -
Blo04g00716 572 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 337 391 IPR024678 GO:0004674|GO:0005524
Blo04g00716 572 MobiDBLite consensus disorder prediction 288 325 - -
Blo04g00716 572 Coils Coil 512 546 - -
Blo04g00716 572 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 569 - -
Blo04g00716 572 SUPERFAMILY Protein kinase-like (PK-like) 30 319 IPR011009 -
Blo04g00716 572 Gene3D Transferase(Phosphotransferase) domain 1 111 293 - -
Blo04g00716 572 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00716 572 MobiDBLite consensus disorder prediction 289 323 - -
Blo04g00716 572 Pfam Protein kinase domain 31 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00716 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Blo04g00716 572 CDD STKc_WNK 26 286 - -
Blo04g00716 572 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00716 572 Gene3D - 333 417 - -
Blo04g00716 572 MobiDBLite consensus disorder prediction 425 469 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01468 Blo-Chr3:41309034 Blo04g00716 Blo-Chr4:6599069 1.24E-126 dispersed
Blo04g00716 Blo-Chr4:6599069 Blo16g00483 Blo-Chr16:19050196 3.19E-162 dispersed
Blo10g00860 Blo-Chr10:27149716 Blo04g00716 Blo-Chr4:6599069 5.07E-120 dispersed
Blo04g00716 Blo-Chr4:6599069 Blo12g00329 Blo-Chr12:18887379 8.67E-161 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84240 PF00069 Pkinase 9.50E-52 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00716 K08867 - csv:101206177 773.467