Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00730 ATGTCCTTTCCCTCTGCCGCTCTCTCTAACCCTGGATTCTCTGAAGCCGGTGTTTACTGCGGGTCGAAAAAGGAACGTACTGCCAGCAATTTCATTCCTAATCTCATATATTTAATGGAGAAGATCACTGATAGCGTCAATGAAAATCGCTGGGCCGCATACGGCGTGGAAGCTCCGCCGTCGGACGTTTTCGCCATCGGAGAGTGCTTCCGCGATCTCTCACCTTCGGATTGCTCCGATTGTTTTTCACAAACAAGGGTTAGGCTTCCTCGGTGTCTTCCTTCCAATTCAGGTCGAATTTATTTAGATGGTTGCTTTCTCCGCTACGATAATTACGATTTCTTTCAAGAAAGTGTTGACACTGAGCACGATGTGATCATATGCGGGCCTCGAACTGACATCGCCAGCGATATATTTATGGAGGAAGAGTTCGCGGAGAAAGTAGATGCAGTGATTATGAATGTGACGGAGAATGCATTGAAGAATAGCGGTTTTGCAGTTACGGAGGAGAGAGGAGGAGTCGAAGGTGTATATGCTTTAGCGCAATGCTGGAAAACAATGGATGCAGAAGGTTGCAGAAAGTGTGTGGAAAATGCTGGTTCTGAACTGAAGACATGTGTGCCGTCGAAAGAGGGAAGAGCTCTGTATACTGGATGCTACTTGAGGTATTCTACGGAGAGATTTTACAGATTGAGCTCTGAAGTAGAAGCTGAACATGGTAGCTACAAGAAAGTATCAAAGATGCACAATAATCTTGGCGGGTCTACGAATAATAAGCTGAATTTCAAGTATGAGATGCTTGAGGAAGCTACAGACCACTTTGATTTGTCGAGAAAACTCGGGCAAGGTGGAGCTGGTTCCGTGTTTAAGGGAATTCTACCTGATGGGAGGATTGTTGCAGTTAAAAGATTGTTCTTCAATAGTCGGCATTGGGTTGATGAATTCTTCAATGAAGTGAACTTGATTGGTGGAATTAAACACAAGAATCTCGTGCGGCTCTTGGGTTGCAGCCTCGAAGGACCCGAAAGTCTTCTTGTTTATGAATACGTTCCTAACAGAAGCCTAGATCAAATCCTTTTCGTGACGGATGAAAGCAATATTCTAAGTTGGAAGCAACGATTCAATATCATCTGCGGAATAGCCGAGGGCCTGGCTTATCTCCATGGAGGTTCTGGGGTTAAGATTATCCACAGAGACATAAAAACCAGCAATATTCTGCTTGATGAGCAGCTTATTCCAAAAATTGCAGATTTTGGGCTTGCTAGATGTCTTTCGCCTGATAATTCACATATTAACACAGGAATTGCAGGAACTTTGGGATACATGGCTCCTGAATATCTTGTTCAAGGACAATTGTCAGAGAAAGCAGATGTTTATGCATTTGGAGTACTTGTCCTCGAGATTGGATGTGGTCGGAAGAACAGCGTTTTCACGCAAGGATCAAGTTCTGTGTTGCACTCTGTATGGAAGCATTACAAAGCCAATCAAATAACACTGTCGGTGGATTTTATGTTGAATGGTAAATTCTCGTTGAGAGAGGCGTCAAACGTGCTTCAGATCGGGCTTTTGTGCACACAAGCGAGCAGCAGCCTAAGACCGTCAATGTTCGAGGTAGTTGAGATGCTGACGGGCGAAGAACGTGTGATTCCGATTCCAACACAGCCGCCATTCCTGAATGCCAGTGTTCTGAGTGCAGGAGAAACAAGCAGAAGCTCCACCATGAATACAACACTGACAGGTACACCTTCAAATGTCTCCTTCAGCGAAGCTGCTCCATTGTGTCTGGTCAAATAA 1794 44.7 MSFPSAALSNPGFSEAGVYCGSKKERTASNFIPNLIYLMEKITDSVNENRWAAYGVEAPPSDVFAIGECFRDLSPSDCSDCFSQTRVRLPRCLPSNSGRIYLDGCFLRYDNYDFFQESVDTEHDVIICGPRTDIASDIFMEEEFAEKVDAVIMNVTENALKNSGFAVTEERGGVEGVYALAQCWKTMDAEGCRKCVENAGSELKTCVPSKEGRALYTGCYLRYSTERFYRLSSEVEAEHGSYKKVSKMHNNLGGSTNNKLNFKYEMLEEATDHFDLSRKLGQGGAGSVFKGILPDGRIVAVKRLFFNSRHWVDEFFNEVNLIGGIKHKNLVRLLGCSLEGPESLLVYEYVPNRSLDQILFVTDESNILSWKQRFNIICGIAEGLAYLHGGSGVKIIHRDIKTSNILLDEQLIPKIADFGLARCLSPDNSHINTGIAGTLGYMAPEYLVQGQLSEKADVYAFGVLVLEIGCGRKNSVFTQGSSSVLHSVWKHYKANQITLSVDFMLNGKFSLREASNVLQIGLLCTQASSSLRPSMFEVVEMLTGEERVIPIPTQPPFLNASVLSAGETSRSSTMNTTLTGTPSNVSFSEAAPLCLVK 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6782624 6785496 - BLOR13642 Blo04g00730 59758

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00730 597 ProSiteProfiles Gnk2-homologous domain profile. 13 114 IPR002902 -
Blo04g00730 597 Gene3D Phosphorylase Kinase; domain 1 234 349 - -
Blo04g00730 597 ProSiteProfiles Gnk2-homologous domain profile. 121 228 IPR002902 -
Blo04g00730 597 ProSiteProfiles Protein kinase domain profile. 274 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00730 597 Pfam Protein kinase domain 276 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00730 597 Pfam Salt stress response/antifungal 20 112 IPR002902 -
Blo04g00730 597 Pfam Salt stress response/antifungal 141 225 IPR002902 -
Blo04g00730 597 SMART serkin_6 274 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00730 597 Gene3D Transferase(Phosphotransferase) domain 1 350 549 - -
Blo04g00730 597 Gene3D - 135 228 IPR038408 -
Blo04g00730 597 Gene3D - 16 114 IPR038408 -
Blo04g00730 597 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 1 3 586 - -
Blo04g00730 597 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 3 586 - -
Blo04g00730 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Blo04g00730 597 CDD STKc_IRAK 280 544 - -
Blo04g00730 597 SUPERFAMILY Protein kinase-like (PK-like) 258 561 IPR011009 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00730 - - - zju:107418385 740.339
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00730 Blo-Chr4:6782624 Blo17g00305 Blo-Chr17:3203238 2.00E-132 dispersed
Blo04g00730 Blo-Chr4:6782624 Blo18g00328 Blo-Chr18:3401706 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g778 Blo04g00730 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone13ag0150 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005816 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 0 1 5 34
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84241 PF00069 Pkinase 8.80E-45 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo04g00730 Blo_Chr04 FPKM 2.564228 2.13942 1.850394 2.018946 3.528176 2.927095 2.805482 7.689649 7.103735 6.801437