Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00746 ATGGCGGCGCATTCTTCCTCTTCTACGTTGCCTGAATCTTCTTCCTCCAGGCACCACGCCTATAGCAGGAAGCAAAAGTCACTCGGTCTTCTATGCTCAAATTTCCTGAGCTTGTATAATCGCGATGGCATCCACTCAGTCGGTCTCGATGATGCTGCATCGCGATTAGGTGTTGAGAGAAGGCGGATCTATGATATTGTAAACGTCCTCGAAAGTGTAGGGGTTTTAGCGAGAAGGGCAAAGAATCAATACAGCTGGAAAGGATTTGAAGCTATTCCTGTCGCCTTACAGCAACTCAAGGAAGAGGGATTGAAGGAGAATTTCAATGCATCTGATGGTAACGACTATGCAAAAGCATCAGATGATGAAGATGAAACATTATCGAATCCTGCAACTGGAAGCCAGAACTCAATTTCTTCGCTGCCCAAATATTCTTCGTCTAAATCAGACAACAGAAGGGAGAAGTCATTGGCCCTTCTTACTCGAAATTTTGTCAAGCTTTTTATCTGCTCTAAAGTGGATCTCATCTCTCTTGATGAAGCTGCAAGGTTGTTGCTAGGGGATGGTCACAATTCATCAATTATGAGAACAAAAGTAAGACGGCTATACGATATTGCAAACGTGCTATCCTCCATGAATCTAATTGAGAAGACCCACGCATCAGTCACCAGAAAACCTGCATTTAGATGGTTGGGATGGAAGGATGGAGCTGGAAAGGAAGCCACATGTAGCGAGCCCCCACCAGAACCTAGGAAAAGAGCATTTGGAATCGATGTAACAAACATCAATTTTAAGAGGAACAAAATTGAAACTTTAGCTAATGAGAATCCGAAGCAGGATATCAATATCACAAAGTCAGCGAAACAAAAAGATTTGATATATGAGGTTGATAGACAAGGTTTGGATAAAGAAAGCAAACAGGGTTCAAAGAGCTACCACTTTGGACCCTTTGCACCGATAACGGTTGCCGTAGCTGGTCCTCAGAGTAGCAGCAACGTGAAGGAACACCCAGATTGGGAGAGCCTTGCCTCTACTTATCGCCCCCAGTATCAGAACCAAGGTACAAATTCCCTTCTGTAG 1080 43.89 MAAHSSSSTLPESSSSRHHAYSRKQKSLGLLCSNFLSLYNRDGIHSVGLDDAASRLGVERRRIYDIVNVLESVGVLARRAKNQYSWKGFEAIPVALQQLKEEGLKENFNASDGNDYAKASDDEDETLSNPATGSQNSISSLPKYSSSKSDNRREKSLALLTRNFVKLFICSKVDLISLDEAARLLLGDGHNSSIMRTKVRRLYDIANVLSSMNLIEKTHASVTRKPAFRWLGWKDGAGKEATCSEPPPEPRKRAFGIDVTNINFKRNKIETLANENPKQDINITKSAKQKDLIYEVDRQGLDKESKQGSKSYHFGPFAPITVAVAGPQSSSNVKEHPDWESLASTYRPQYQNQGTNSLL 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7053527 7055607 - BLOR13658 Blo04g00746 59774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00746 359 PANTHER E2F TRANSCRIPTION FACTOR-LIKE E2FF 6 358 - -
Blo04g00746 359 SMART E2F_TDP_2 152 232 IPR003316 GO:0005667|GO:0006355
Blo04g00746 359 SMART E2F_TDP_2 23 88 IPR003316 GO:0005667|GO:0006355
Blo04g00746 359 Gene3D - 146 234 IPR036388 -
Blo04g00746 359 Gene3D - 18 90 IPR036388 -
Blo04g00746 359 SUPERFAMILY Winged helix DNA-binding domain 154 233 IPR036390 -
Blo04g00746 359 Pfam E2F/DP family winged-helix DNA-binding domain 24 88 IPR003316 GO:0005667|GO:0006355
Blo04g00746 359 Pfam E2F/DP family winged-helix DNA-binding domain 154 232 IPR003316 GO:0005667|GO:0006355
Blo04g00746 359 MobiDBLite consensus disorder prediction 126 146 - -
Blo04g00746 359 MobiDBLite consensus disorder prediction 107 149 - -
Blo04g00746 359 PANTHER TRANSCRIPTION FACTOR E2F 6 358 IPR015633 GO:0000978|GO:0006357
Blo04g00746 359 SUPERFAMILY Winged helix DNA-binding domain 22 86 IPR036390 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00746 Blo16g00207 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00746 Blo-Chr4:7053527 Blo14g00243 Blo-Chr14:2153627 1.27E-11 dispersed
Blo16g00208 Blo-Chr16:4669150 Blo04g00746 Blo-Chr4:7053527 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12295 PF02319 E2F_TDP 9.70E-20 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00746 K09391 - zju:107415708 465.692