Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00764 ATGGGCAATTGCTTGGAAGCTCGCTCAAAGGTGGATAACTCTCTCAGCTCTCTTCCTACTTCTGGTGCTGAAATGGGAGCTAATTTATTTTACAATGAACAAGATAACCAGATGAAAGGGTCTTCAAAGACTGCTTCATTTGTCATATTTATTTTTTGTAAGACTGTTAATGCTTCAACTTCATTACCAGTACCATCAGTCAACGAAACAGCTAATTCTAGGAGTCTCCCCTCTCCAAAGTCTGAATTTGACATACTGTCATCCCCCCATTTGAAAGCTTTCACCTTCAATGAGCTTAAAAACGCAACTAGAAACTTCCGGCCCGACAGCCTCATAGGCGAAGGAGGTTTTGGTTATGTTTATAAAGGGTGGATTGATGAGCAGACTCTCAGTGCTGTGAGGCCTGGATCCGGGATCGTAATTGCTGTAAAGAAGCTTAAACCTGAAGGTTTTCAGGGTCATAAAGAGTGGTTGTCTGAAGTTAATTATCTCGGTCAACTTCATCATCCAAATCTTGTCAAACTCATTGGCTACTGCCTGGATGGGGATAACAGGCTTTTGGTCTATGAGTATATGTCTAAAGGCAGCCTAGAAAATCATCTTTTTCGGCGGGGTGCCCAACCGCTTTCGTGGGCTATAAGGATCAAAGTTGCAATTGATGCTGCCAGGGGGCTCTCGTTTCTTCACGATTCCGAGCAAAAAATTATATATCGAGATTTCAAAGCTTCAAACATTTTACTGGATTCAGTAAGTTTGACAACCAAAACAAAGGCTGGTTTGGAGGGATTCAAGGGAAGAGAGAAAAGAAGGAAAGTAGGAGATTTTAGGCAAAGAACAAACAGTTTAGATTTCAACGCCAAACTTTCAGACTTCGGGTTGGCGAAAGAAGGGCCGACAGGGGATCGAACTCATGTGTCCACTCAAGTCATGGGCACTCATGGCTATGCTGCCCCCGAATATATTGCAACAGGTCGACTAACCGCTAAATGCGACGTCTATAGCTTTGGGGTTGTGCTTATCGAGCTTCTTTCAGGAAGACGTGCAGTCGACAAAACAAAAGTGGGTGTGGAGCAAAATCTAGTGGATTGGGCGAGTCCTTATTTGGGCGATAAGCGTAAGGTCTTTCGTATAATGGACACGAAATTAGAAGGTCAATACCCCCAAAAGGCAGCTTATATGGCCACGGTCCTTGCAAGACAGTGCATAACTGATGCCAAACTCCGGCCACAAATGTCAGAAGTCTTGGCCACTCTAGAGCGTCTTCCGTCGACCAGATTTGCAAGCAGTCCATCTAATTTAGAGCACAGAAGAGTCCGAAGTCCAGGGCCGAGGTGTTGCCCGCTGCCCTGCCCGAAGCTGCCCGCCAGAACCCCTTGCCCGCATCTCCATCTTCTCCAGCAAGCTGCTTTCGCAGCGTTCTTCTCCAGCAACAACGCCGAAAACAGAACCGAAGAGGAGACGCTCTTCAACAGAACTCGTCGGCCATCGGAGACTGAGAAGGAGAAGCCGCCGATCGACTCTGTCCAGCGATCGTCCTCCATCGTCCCGAAGCGAAGAACAGAAGCGACGATCAGCAGCGAACGCGTCCGATCCGTTGTCTGTCGTCGAGCCGTTGTCGTCAAGCCCTCCCCCGCCATCGACCGTCAACTGTCCCGAACCGAAGCACCGAAGCGCGCCGATCTGAACCTCCCGTCGCCGTCGATCGATTCTGAACAGAGGGGAGAGAAGTTGCACCGCCGTCCGTCGCCGACCACAGTCCCGATCCGTCCAGCAGTTTTGAAAAACAAAGGGAAATTTTTTGTTTTTGGTTGA 1812 48.23 MGNCLEARSKVDNSLSSLPTSGAEMGANLFYNEQDNQMKGSSKTASFVIFIFCKTVNASTSLPVPSVNETANSRSLPSPKSEFDILSSPHLKAFTFNELKNATRNFRPDSLIGEGGFGYVYKGWIDEQTLSAVRPGSGIVIAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGYCLDGDNRLLVYEYMSKGSLENHLFRRGAQPLSWAIRIKVAIDAARGLSFLHDSEQKIIYRDFKASNILLDSVSLTTKTKAGLEGFKGREKRRKVGDFRQRTNSLDFNAKLSDFGLAKEGPTGDRTHVSTQVMGTHGYAAPEYIATGRLTAKCDVYSFGVVLIELLSGRRAVDKTKVGVEQNLVDWASPYLGDKRKVFRIMDTKLEGQYPQKAAYMATVLARQCITDAKLRPQMSEVLATLERLPSTRFASSPSNLEHRRVRSPGPRCCPLPCPKLPARTPCPHLHLLQQAAFAAFFSSNNAENRTEEETLFNRTRRPSETEKEKPPIDSVQRSSSIVPKRRTEATISSERVRSVVCRRAVVVKPSPAIDRQLSRTEAPKRADLNLPSPSIDSEQRGEKLHRRPSPTTVPIRPAVLKNKGKFFVFG 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7290714 7295086 - BLOR13676 Blo04g00764 59792

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00764 603 Gene3D Transferase(Phosphotransferase) domain 1 192 436 - -
Blo04g00764 603 PANTHER BNAA06G34000D PROTEIN 283 430 - -
Blo04g00764 603 PANTHER BNAA06G34000D PROTEIN 59 249 - -
Blo04g00764 603 PANTHER OS01G0588500 PROTEIN-RELATED 59 249 - -
Blo04g00764 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Blo04g00764 603 MobiDBLite consensus disorder prediction 484 506 - -
Blo04g00764 603 CDD STKc_IRAK 112 421 - -
Blo04g00764 603 ProSiteProfiles Protein kinase domain profile. 106 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00764 603 SUPERFAMILY Protein kinase-like (PK-like) 81 422 IPR011009 -
Blo04g00764 603 MobiDBLite consensus disorder prediction 481 526 - -
Blo04g00764 603 PANTHER OS01G0588500 PROTEIN-RELATED 283 430 - -
Blo04g00764 603 Gene3D Phosphorylase Kinase; domain 1 78 191 - -
Blo04g00764 603 MobiDBLite consensus disorder prediction 549 588 - -
Blo04g00764 603 Pfam Protein tyrosine and serine/threonine kinase 110 416 IPR001245 GO:0004672|GO:0006468
Blo04g00764 603 ProSitePatterns Protein kinases ATP-binding region signature. 112 145 IPR017441 GO:0005524
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00764 - - - jre:108995487 577.785
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00764 Blo-Chr4:7290714 Blo10g00487 Blo-Chr10:10366503 8.25E-138 dispersed
Blo16g01128 Blo-Chr16:39810742 Blo04g00764 Blo-Chr4:7290714 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g526 Blo04g00764 . . . . . . . Cmo13g00966 Cmo18g00094 . . . . . . . . . . . . . . . . . . . . . Cone2ag0855 . . . Lsi02g00304 Csa01g00783 Chy12g01332 Cme12g01761 . . . . . Bpe15g00609 . . . . . Cma13g00936 Cma18g00122 Car13g00776 Car18g00112 Cpe09g01070 . Bhi08g01398 . . . . . . Cla01g01432 . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001456 1 3 2 0 2 0 4 0 0 2 1 0 4 3 0 4 0 0 4 0 3 0 0 0 0 3 0 0 0 1 37
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84244 PF07714 PK_Tyr_Ser-Thr 8.20E-41 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo04g00764 Blo_Chr04 FPKM 9.77709 10.462905 2498.395508 2489.088623 2.130903 0.971978 1.372729 6.178189 5.54157 3.576849