Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo04g00773 | AGGAAAATGGCGACGACTCAAGCTTCAGCTTCCGTGTTCCGGCCATGCGCCTCGAAATCGAGGTTTCTTAGTGGTTCTTCCGGTAAACTAAATCGATCTCTGTCTGTTAAACCACTGGTGTCTTCTTCGTCCACTTCTTTCAAAGTTGAAGCCAAGAAAGGAGAATGGCTGCCAGGCCTTCCTTCCCCACCTTACCTCAATGGAAGTCTCGCCGGCGACAACGGATTCGACCCACTGGGGCTAGCTGAAGACCCGGAAAACTTGAGGTGGTTTGTACAAGCAGAGCTGGTCAATGGACGGTGGGCGATGCTGGGGGTGGCCGGAATGCTGCTGCCGGAAGTGTTGACAAGCATCGGAATAATAAACGTTCCCAAGTGGTACGACGCCGGAAAGGCAGAGTATTTTGCATCGTCGTCGACGCTGTTCGTGATAGAGTTTATACTGTTTCACTACGTCGAGATCAGAAGGTGGCAAGACATAAAATATCCAGGAAGTGTGAATCAAGATCCGATTTTTAAGCAATACAGTTTGCCTCCTAACGAAGTCGGCTATCCCGGCGGCATATTCAACCCTCTTAATTTCCAACCCACTCTAGAGGCCAAGGAAAAAGAGATAGCTAATGGGAGATTAGCAATGCTGGCATTTTTAGGGTTCATAGTTCAACACAACGTGACAGGAAAAGGGCCATTCGACAATCTGTTGCAGCACCTGTCTGACCCTTGGCACAACACCATTGTTCAAACCTTCAGTGGCAAT | 756 | 48.94 | RKMATTQASASVFRPCASKSRFLSGSSGKLNRSLSVKPLVSSSSTSFKVEAKKGEWLPGLPSPPYLNGSLAGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVLTSIGIINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKYPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFQPTLEAKEKEIANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIVQTFSGN | 252 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 7617799 | 7618859 | - | BLOR13685 | Blo04g00773 | 59801 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo04g00773 | 252 | Gene3D | Chlorophyll a/b binding protein domain | 63 | 242 | - | - | |
| Blo04g00773 | 252 | SUPERFAMILY | Chlorophyll a-b binding protein | 53 | 249 | - | - | |
| Blo04g00773 | 252 | Pfam | Chlorophyll A-B binding protein | 63 | 222 | IPR022796 | - | |
| Blo04g00773 | 252 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 4 | 252 | IPR001344 | GO:0009765|GO:0016020 | |
| Blo04g00773 | 252 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC | 4 | 252 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Blo04g00773 | Blo13g00003 | CCT | |
| Blo04g00773 | Blo15g00312 | CCT | |
| Blo04g00773 | Blo13g00003 | ECH | |
| Blo04g00773 | Blo15g00312 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo04g00315 | Blo-Chr4:2472779 | Blo04g00773 | Blo-Chr4:7617799 | 2.24E-47 | dispersed | |
| Blo04g00773 | Blo-Chr4:7617799 | Blo09g00381 | Blo-Chr9:14647042 | 3.10E-73 | dispersed | |
| Blo13g00003 | Blo-Chr13:29525 | Blo04g00773 | Blo-Chr4:7617799 | 1.90E-156 | wgd | |
| Blo15g00312 | Blo-Chr15:3585189 | Blo04g00773 | Blo-Chr4:7617799 | 2.70E-89 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo04g00773 | K08910 | - | zju:107419233 | 463.381 |