Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00782 ATGTCGGACAGTGAAGATCATCAGTTTGAATCGAAGGCCGATGCCGGAGCTTCCAAAACCTACCCTCAGCAAGCTGGTACTGTTCGCAAAAATGGCTACATCGTCATCAAAGCCCGCCCTTGCAAGGTGGTTGAAGTTTCCACCTCCAAGACTGGAAAGCATGGCCATGCTAAGTGCCACTTTGTTGGAATTGACATTTTCACTGGCAAGAAGTTTGATGATATAGTTCCCTCATCCCATAACTGTGATGTTCCTCATGTTAATCGTACTGATTATCAGCTCATCGATATTTCTGAGGATGGATTTGTGAGCTTGCTGACTGAGAATGGAAATACTAAGGATGATCTTAGGCTCCCATCCGATGATAGTCTGCTTACCCAGATAAAGGAGGGTTTTGCTGAGGGAAAGGATCTTGTTGTTACTGTGATGTCTGCCATGGGAGAAGAGCAGATTTGTGCTCTGAAGGACATTGGCCCCAAGTAG 483 45.76 MSDSEDHQFESKADAGASKTYPQQAGTVRKNGYIVIKARPCKVVEVSTSKTGKHGHAKCHFVGIDIFTGKKFDDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPSDDSLLTQIKEGFAEGKDLVVTVMSAMGEEQICALKDIGPK 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7763372 7765502 - BLOR13694 Blo04g00782 59810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00782 160 Gene3D - 1 86 IPR014722 -
Blo04g00782 160 Gene3D - 87 159 IPR012340 -
Blo04g00782 160 SUPERFAMILY Nucleic acid-binding proteins 87 157 IPR012340 -
Blo04g00782 160 SUPERFAMILY Translation proteins SH3-like domain 16 94 IPR008991 -
Blo04g00782 160 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 86 155 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Blo04g00782 160 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 1 157 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Blo04g00782 160 CDD S1_eIF5A 87 157 - -
Blo04g00782 160 SMART eIF_5a_2 86 155 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Blo04g00782 160 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 51 58 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Blo04g00782 160 TIGRFAM eIF_5A: translation elongation factor IF5A 18 154 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Blo04g00782 160 MobiDBLite consensus disorder prediction 1 22 - -
Blo04g00782 160 PIRSF Transl_init_eIF5A 1 158 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Blo04g00782 160 PANTHER BNAA07G09420D PROTEIN 1 157 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00782 Blo16g00178 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00782 Blo-Chr4:7763372 Blo18g00009 Blo-Chr18:103981 2.10E-91 dispersed
Blo11g00789 Blo-Chr11:11920878 Blo04g00782 Blo-Chr4:7763372 7.85E-106 wgd
Blo16g00178 Blo-Chr16:3985046 Blo04g00782 Blo-Chr4:7763372 1.74E-117 wgd
Blo04g00782 Blo-Chr4:7763372 Blo06g00921 Blo-Chr6:32453612 3.32E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00782 K03263 - mnt:21398335 310.842