Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00784 ATGATTTCCAAGAAAATTCATCGGAAAACCGTTTGCGTTATCGGAGCCGGACCAGCCGGCCTAGTTGCAGCAAGAGAGTTGAGAAAAGAAGGTCATGAGGCAGTTGTTTTAGAACAAAACCATGAAGTGGGAGGACAATGGCTGTACAATCCAAATGTGGAGAGTGAGGATCCCTTAGGAAGGGAAGCTTTTCTAAAAGTTCATAGCAGTATTTACTCATCTTTAAGGCTCACAACTCCAAGAGAAATCATGGGTTTTACAGATTTTCCATTCTTGGTGAAGAAAGATAGGGATATGAGAAGGTTTCCTAACCACAAGGAACTTCTTTTGTACCTTGTAGATTTCTGTGACTGGTTTGGATTGAGAGAGATGATAAGGTTTAATTGTAGAGTAGAATATGTTGGGGTTTTGGATTTTGCTGCTGTTGGAAAGGATTTGAAATGGGTTGTGAGAAGTAAAGTAAAAGGGAATGATAGCAAGGTAATGGAAGAAGTTTTTGATGCTGTTGTTGTAGCTACTGGGCATTATTCTCATCCTAGATTACCTCCCATTGAAGGAATTAATACATGGAGAAGGAAGCAAATGCATAGTCATGTTTACAGAGTTCCTGAGCCATTTCACAATGAGGTTGTGGTGGTGGTTGGAAGCTCTCTGAGCGGGCGAGATATATCCTTGGAGCTTGTGAGCGTGGCTAAGGATGTTCACATCAGCGCTAAATCCCTTAATATTTCTCCAGGCTTGTCTGAACTCATTGCCAAACATCACAATTTGCAGCTCCATCCGGAGATTGAATCATTTAAAGAAGATGGTCGTGTTGAATTTGTGGACGGGTCTTGGATTATTGCAGATACTGTCATATATTGTACTGGGTATTCATATAAGTTCCCATTTCTTGACACCAAAGGAGTAGTTGATGTGGATGACGATAGAGTGGGGCCATTGTATGAGCATACTTTCCCTCCTTCTCTTGCTCCCTCCCTCTCCTTTATGGGCATTCCAAGAAAGTTGATAGGGTTTCCCTTTTTTGAAGCACAAGCAAAATGGATAGCTGAATTGCTGTCTGAGAAAAGAGCATTACCATCATGGGAGGAGATGATGTCCTCCATTCATGACTTTTACCTCTCTAGGGATCTTGCTTCCATCCCCAAGCATAATACCCATGATATTGCTAATTTTGAGTATTGTGATAAATATGGAGATAATGTTGGATTCCCACACTTGGAAGAATGGAGGAAACAGCTCTGCTTATCAGCCTTGATAAATGCTGATTCAAATCTGGAGACATACAGAGATTCTTGGAATGATGATGAACTGCTTCAACAGGCCTATCAGAGTCCCCATTTCACTCAATATCACCTTTGA 1362 41.26 MISKKIHRKTVCVIGAGPAGLVAARELRKEGHEAVVLEQNHEVGGQWLYNPNVESEDPLGREAFLKVHSSIYSSLRLTTPREIMGFTDFPFLVKKDRDMRRFPNHKELLLYLVDFCDWFGLREMIRFNCRVEYVGVLDFAAVGKDLKWVVRSKVKGNDSKVMEEVFDAVVVATGHYSHPRLPPIEGINTWRRKQMHSHVYRVPEPFHNEVVVVVGSSLSGRDISLELVSVAKDVHISAKSLNISPGLSELIAKHHNLQLHPEIESFKEDGRVEFVDGSWIIADTVIYCTGYSYKFPFLDTKGVVDVDDDRVGPLYEHTFPPSLAPSLSFMGIPRKLIGFPFFEAQAKWIAELLSEKRALPSWEEMMSSIHDFYLSRDLASIPKHNTHDIANFEYCDKYGDNVGFPHLEEWRKQLCLSALINADSNLETYRDSWNDDELLQQAYQSPHFTQYHL 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7795788 7798522 - BLOR13696 Blo04g00784 59812

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00784 453 Gene3D - 183 288 IPR036188 -
Blo04g00784 453 SUPERFAMILY FAD/NAD(P)-binding domain 258 414 IPR036188 -
Blo04g00784 453 Gene3D - 11 432 IPR036188 -
Blo04g00784 453 SUPERFAMILY FAD/NAD(P)-binding domain 8 236 IPR036188 -
Blo04g00784 453 Pfam Flavin-binding monooxygenase-like 257 371 IPR020946 GO:0004499|GO:0050660|GO:0050661
Blo04g00784 453 Pfam Flavin-binding monooxygenase-like 9 240 IPR020946 GO:0004499|GO:0050660|GO:0050661
Blo04g00784 453 PIRSF FMO 7 244 IPR000960 GO:0050660|GO:0050661
Blo04g00784 453 PIRSF FMO 246 404 IPR000960 GO:0050660|GO:0050661
Blo04g00784 453 PANTHER DIMETHYLANILINE MONOOXYGENASE 6 452 - -
Blo04g00784 453 PANTHER FLAVIN-CONTAINING MONOOXYGENASE FMO GS-OX-LIKE 8 6 452 - -
Blo04g00784 453 PRINTS Flavin-containing monooxygenase (FMO) signature 222 237 IPR000960 GO:0050660|GO:0050661
Blo04g00784 453 PRINTS Flavin-containing monooxygenase (FMO) signature 33 57 IPR000960 GO:0050660|GO:0050661
Blo04g00784 453 PRINTS Flavin-containing monooxygenase (FMO) signature 275 302 IPR000960 GO:0050660|GO:0050661
Blo04g00784 453 PRINTS Flavin-containing monooxygenase (FMO) signature 9 25 IPR000960 GO:0050660|GO:0050661
Blo04g00784 453 PRINTS Flavin-containing monooxygenase (FMO) signature 340 353 IPR000960 GO:0050660|GO:0050661
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00784 - - - pvy:116107807 729.939
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00581 Blo-Chr1:6362140 Blo04g00784 Blo-Chr4:7795788 1.30E-10 dispersed
Blo03g00171 Blo-Chr3:4328207 Blo04g00784 Blo-Chr4:7795788 2.34E-131 dispersed
Blo04g00784 Blo-Chr4:7795788 Blo15g00431 Blo-Chr15:6194219 2.10E-15 dispersed
Blo04g00784 Blo-Chr4:7795788 Blo06g00349 Blo-Chr6:21056009 1.78E-14 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g609 Blo04g00784 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi02g00096 . Chy12g01520 Cme12g01966 . . . Bda14g00865 . . Bma03g00842 . Sed08g2095 . . . . . . . . Bhi08g01127 Tan05g2408 Cmetu06g2174 . Hepe07g1737 . . Cla04g01176 Cam04g1233 Cec01g1744 Cco01g1790 Clacu04g1261 Cmu04g1240 Cre01g1534 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009615 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 1 1 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo04g00784 Blo_Chr04 FPKM 3.867769 4.150546 8.307734 8.921877 13.573971 9.837088 10.974729 9.2553 8.449199 8.645795