Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00812 ATGAACCGGGCCGTTAAGTTAAAGACACGCAATCCCACAATTGGAGACGCGCAGTTTGCAGCGCGTGCTGCCAACGAATCGACGTGCGTTCGGAAGGAAGACTTTCTTTGCCCTAATCGCCTGCGAGCGGGAGCCGTCTCTCTTATCCAGAAAAAAACCTCTTCGATCCCATTCCCTGATATATCTTCAACTATCAGCCATGTCCCTCAATTTCCTCTTCCTTCTCCTCATCTTCCTCCAGCTGGGATCCTCCATCGGAGTTATTTTACTGTAGTTGTTCTAATGGTTTGTTTACCCGATCTACTTAAATCAGCAACAATGACCAAAATTATCAAGGAAATGCTCCCAGCTGATGTGCGTGTTGCAAGGGATGCTCAAGATCTTCTGATCGAGTGTTGTGTAGAGTTCATAAATCTTGTATCGTCGGAGTCAAATGAAGTTTGTAACAGAGAAGAGAGACGAACCATCGCACCTGAGCATGTGCTCAAGGCTTTGGAGGTGCTTGGGTTTGGCGATTACATTGAAGAAGTCTTTGCAGCTTATGAACAACACAAGCTTGAAACAATGCAAGACTCCTCCAAAAGTAGTGGGAAGTGGAGCAATGGAGCCAAAATGTCAGAGGAAGAAGCATTGGCCGAGCAGCAGAGAATGTTTGCCGAGGCACGTGCAAGAATGAATGGCGGTGTTGCATCTGAAAAGCCTGAGTCAAACCAAAGTTTAGAGAGCTAA 729 46.36 MNRAVKLKTRNPTIGDAQFAARAANESTCVRKEDFLCPNRLRAGAVSLIQKKTSSIPFPDISSTISHVPQFPLPSPHLPPAGILHRSYFTVVVLMVCLPDLLKSATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCNREERRTIAPEHVLKALEVLGFGDYIEEVFAAYEQHKLETMQDSSKSSGKWSNGAKMSEEEALAEQQRMFAEARARMNGGVASEKPESNQSLES 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8423345 8426382 + BLOR13724 Blo04g00812 59840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00812 242 SUPERFAMILY Histone-fold 103 229 IPR009072 GO:0046982
Blo04g00812 242 Coils Coil 204 224 - -
Blo04g00812 242 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 104 165 IPR003958 -
Blo04g00812 242 Gene3D Histone, subunit A 100 230 IPR009072 GO:0046982
Blo04g00812 242 PANTHER PROTEIN DR1 HOMOLOG 102 239 IPR044255 -
Blo04g00812 242 MobiDBLite consensus disorder prediction 190 242 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00812 Blo-Chr4:8423345 Blo10g00864 Blo-Chr10:27339437 6.28E-17 dispersed
Blo16g00147 Blo-Chr16:3246930 Blo04g00812 Blo-Chr4:8423345 4.01E-78 wgd
Blo04g00812 Blo-Chr4:8423345 Blo06g01194 Blo-Chr6:35462669 5.62E-73 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12304 PF00808 CBFD_NFYB_HMF 1.70E-19 CL0012 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00812 K21751 - gmx:100807912 241.121