Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g00812 | ATGAACCGGGCCGTTAAGTTAAAGACACGCAATCCCACAATTGGAGACGCGCAGTTTGCAGCGCGTGCTGCCAACGAATCGACGTGCGTTCGGAAGGAAGACTTTCTTTGCCCTAATCGCCTGCGAGCGGGAGCCGTCTCTCTTATCCAGAAAAAAACCTCTTCGATCCCATTCCCTGATATATCTTCAACTATCAGCCATGTCCCTCAATTTCCTCTTCCTTCTCCTCATCTTCCTCCAGCTGGGATCCTCCATCGGAGTTATTTTACTGTAGTTGTTCTAATGGTTTGTTTACCCGATCTACTTAAATCAGCAACAATGACCAAAATTATCAAGGAAATGCTCCCAGCTGATGTGCGTGTTGCAAGGGATGCTCAAGATCTTCTGATCGAGTGTTGTGTAGAGTTCATAAATCTTGTATCGTCGGAGTCAAATGAAGTTTGTAACAGAGAAGAGAGACGAACCATCGCACCTGAGCATGTGCTCAAGGCTTTGGAGGTGCTTGGGTTTGGCGATTACATTGAAGAAGTCTTTGCAGCTTATGAACAACACAAGCTTGAAACAATGCAAGACTCCTCCAAAAGTAGTGGGAAGTGGAGCAATGGAGCCAAAATGTCAGAGGAAGAAGCATTGGCCGAGCAGCAGAGAATGTTTGCCGAGGCACGTGCAAGAATGAATGGCGGTGTTGCATCTGAAAAGCCTGAGTCAAACCAAAGTTTAGAGAGCTAA | 729 | 46.36 | MNRAVKLKTRNPTIGDAQFAARAANESTCVRKEDFLCPNRLRAGAVSLIQKKTSSIPFPDISSTISHVPQFPLPSPHLPPAGILHRSYFTVVVLMVCLPDLLKSATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLVSSESNEVCNREERRTIAPEHVLKALEVLGFGDYIEEVFAAYEQHKLETMQDSSKSSGKWSNGAKMSEEEALAEQQRMFAEARARMNGGVASEKPESNQSLES | 242 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 8423345 | 8426382 | + | BLOR13724 | Blo04g00812 | 59840 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g00812 | 242 | SUPERFAMILY | Histone-fold | 103 | 229 | IPR009072 | GO:0046982 | |
Blo04g00812 | 242 | Coils | Coil | 204 | 224 | - | - | |
Blo04g00812 | 242 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 104 | 165 | IPR003958 | - | |
Blo04g00812 | 242 | Gene3D | Histone, subunit A | 100 | 230 | IPR009072 | GO:0046982 | |
Blo04g00812 | 242 | PANTHER | PROTEIN DR1 HOMOLOG | 102 | 239 | IPR044255 | - | |
Blo04g00812 | 242 | MobiDBLite | consensus disorder prediction | 190 | 242 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g00812 | Blo-Chr4:8423345 | Blo10g00864 | Blo-Chr10:27339437 | 6.28E-17 | dispersed | |
Blo16g00147 | Blo-Chr16:3246930 | Blo04g00812 | Blo-Chr4:8423345 | 4.01E-78 | wgd | |
Blo04g00812 | Blo-Chr4:8423345 | Blo06g01194 | Blo-Chr6:35462669 | 5.62E-73 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12304 | PF00808 | CBFD_NFYB_HMF | 1.70E-19 | CL0012 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g00812 | K21751 | - | gmx:100807912 | 241.121 |