Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00825 ATGGCTGAATTTTTTTCGGAGTTGCAGAGTTTGAAGCTCTCTTTTCCTTTGATGGAAGCTGATCCCAACGTGGAGCTAATGAACCAAGTAGAAGCTCTCAACCCTAGTCTTTTTCATGACTTTCAAAACATGATCAATTTCCACCCATTCCTTCCTTTCTCAAATGATGTTTCATTTTGCCATCCTACTCCTGAATTCTCCAAAAATTTGTCGGAAATCTTTCCGAGTTCGATCCGACAATCGACCGAGTTCATGGTACCGGCTTCGGAATGGACTGTCGTCGAAGAAAACGAAAGAAAAAAGAGAAAATCCATAAAAGTAGCAGAAAATAGCTCTACAAACTCATGTGTTCAAGTTTGTGACAGTGGAATTCACAGAAAAAATGGTTCGGGAAGAGGAAAGAAGGTGAAGAGAATTGAGAAGGAAGAAGAAGAAGAAGAAAAGCCCAAAGAAGTCGTTCATGTTAGAGCTAAGAGAGGTCAAGCTACTGACAGTCACAGTATTGCAGAAAGAGTTAGAAGAGGAAAAATCAACGAGAGATTAAGACACTTGCAAGATATTGTTCCTGGTTGCTATAAGACGATGGGGATGGCAGTGATGTTGGATGAGATAATTAATTATGTTCAGTCTTTGCAGAATCAGGTTGAGTTTCTTTCAATGAAGCTCACTGCAGCAAGCTCTTTTTATGACTTCAACTCAGAAACAGATGCCTTAGAAACATTGCAGCTGGAATGGAAGCCTGGAAGGGACAGTTCAGGACTAGGGTTCAGGACTCTAGGGTCGACACCGAAGGGGAGACGAGAGTCGGGACTGGCTTCGTCTCTCAGTACCGGACTACGGAGGGGAGTCGGAGCTCGGACATCGTCGGTCGTCGAGGGTGAGACGGTGACTGGTGAGACTGAGAGGCTGACGAGTGACGACCAGGGGAGGAGGGATTCACCGATTCAGGGAGCTGGAGAAGTCGAGATTGAGATTTGA 978 44.68 MAEFFSELQSLKLSFPLMEADPNVELMNQVEALNPSLFHDFQNMINFHPFLPFSNDVSFCHPTPEFSKNLSEIFPSSIRQSTEFMVPASEWTVVEENERKKRKSIKVAENSSTNSCVQVCDSGIHRKNGSGRGKKVKRIEKEEEEEEKPKEVVHVRAKRGQATDSHSIAERVRRGKINERLRHLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASSFYDFNSETDALETLQLEWKPGRDSSGLGFRTLGSTPKGRRESGLASSLSTGLRRGVGARTSSVVEGETVTGETERLTSDDQGRRDSPIQGAGEVEIEI 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8695695 8701354 - BLOR13737 Blo04g00825 59853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00825 325 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 244 IPR024097 GO:0006355
Blo04g00825 325 MobiDBLite consensus disorder prediction 127 150 - -
Blo04g00825 325 Coils Coil 318 325 - -
Blo04g00825 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 161 211 IPR011598 GO:0046983
Blo04g00825 325 Gene3D - 158 229 IPR036638 GO:0046983
Blo04g00825 325 MobiDBLite consensus disorder prediction 267 283 - -
Blo04g00825 325 CDD bHLH_AtBPE_like 154 236 - -
Blo04g00825 325 Pfam Helix-loop-helix DNA-binding domain 165 212 IPR011598 GO:0046983
Blo04g00825 325 PANTHER TRANSCRIPTION FACTOR BEE 1 2 244 - -
Blo04g00825 325 MobiDBLite consensus disorder prediction 252 325 - -
Blo04g00825 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 229 IPR036638 GO:0046983
Blo04g00825 325 MobiDBLite consensus disorder prediction 135 150 - -
Blo04g00825 325 SMART finulus 167 217 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00825 Blo15g00068 CCT
Blo04g00825 Blo13g00169 CCT
Blo04g00825 Blo15g00068 ECH
Blo04g00825 Blo13g00169 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00825 Blo-Chr4:8695695 Blo13g00169 Blo-Chr13:5996705 3.02E-68 dispersed
Blo14g00790 Blo-Chr14:25542692 Blo04g00825 Blo-Chr4:8695695 2.27E-22 transposed
Blo15g00068 Blo-Chr15:571507 Blo04g00825 Blo-Chr4:8695695 1.54E-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12307 PF00010 HLH 1.10E-05 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00825 - - zju:107418798 268.47