Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00828 ATGGGGTTTTTCTCCGTTCTATGTCCCTGCTTAGAAAAGAGATTTTCCGGAGCTGGAAATTCAGCCGATACTGCTAAAGCCGACGACGGCGTTGAATCATATGACTTGTTCTTCGACCTGCGTACTCTGCAAATCGCAACGAATTTCTTCTCCGATTTGAATAAGCTCGGCCATGGAGGTTTCGGTCCGGTATACAAGGGCCTGATGCCAAATGGTCAAGAAGTTGCTGTTAAAAAGCTCTCGCTAGAGTCAAGACAGGGAGTGAAAGAGTTTACTAATGAAGTGAAACTGTTACTGAGAATTCAACACAAAAACTTGGTGACCCTATTTGGGTGTTGTGTCGAAGGACCTGAGAAGATGCTTATTTATGAGTATCTATCAAACAGAAGTCTTGATTATTTTCTTTTTGATAAAGAGAAGTCACCATCCTTGGATTGGAGAACACGATTCCAAATAGTTACAGGTATTGTAAGAGGTCTTCTATACTTGCACGAAGAGGCCCCAGTGAGAATCATTCATAGAGACATTAAAGCCAGTAATATATTACTTGATGAGAAACTGAATCCAAAAATCTCGGATTTTGGTTTGGCAAGACTCTTTCCGGGCGATGATACCCATGTTAATACATTTAGAATTGCGGGTACTCATGGTTACATGGCCCCTGAATATGCCATGCAAGGATATCTGTCTGTCAAAACAGATGTTTTCAGTTTTGGTATCTTGGTTCTGGAAATTGTCAGCGGGAGAGAGAACTATGGTAAGAAGCTTGATGCAGCAAAAGCAGACCTCTTAAGCTATGCATGGTTTCTTTATGAAGGTGGCAAACCCTTGGATTTGGTGGATCCAACCCTCGTGAAGTGCAATCTCGACGAGGCAGCCATGTGCATTCAACTGGGATTGCTATGTTGCCAAGCGAATGTCTCAGATCGGCCGGACATGAATGGAGTTCATCTCATGCTTTCGAGTGACTCTTTTACTTTACCAAGGCCAGGAAAACCCGGACTAAGAGGTCGCCAAGGGCTGTGGACTTCCGGCTCAACTACTGCCTTCTCCAACACAAATGCTCAGTCAAGTACATCTGGTGCTACCAAGCCATCTTCTGCTAATATTTCCGTGGAGGATTATTCTAGAAACTCTATCTCCGTTTCTTCCATTGATGAAGGTAGATGA 1170 43.42 MGFFSVLCPCLEKRFSGAGNSADTAKADDGVESYDLFFDLRTLQIATNFFSDLNKLGHGGFGPVYKGLMPNGQEVAVKKLSLESRQGVKEFTNEVKLLLRIQHKNLVTLFGCCVEGPEKMLIYEYLSNRSLDYFLFDKEKSPSLDWRTRFQIVTGIVRGLLYLHEEAPVRIIHRDIKASNILLDEKLNPKISDFGLARLFPGDDTHVNTFRIAGTHGYMAPEYAMQGYLSVKTDVFSFGILVLEIVSGRENYGKKLDAAKADLLSYAWFLYEGGKPLDLVDPTLVKCNLDEAAMCIQLGLLCCQANVSDRPDMNGVHLMLSSDSFTLPRPGKPGLRGRQGLWTSGSTTAFSNTNAQSSTSGATKPSSANISVEDYSRNSISVSSIDEGR 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8736525 8740624 - BLOR13740 Blo04g00828 59856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00828 389 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 387 - -
Blo04g00828 389 SMART serkin_6 50 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00828 389 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 387 - -
Blo04g00828 389 MobiDBLite consensus disorder prediction 351 370 - -
Blo04g00828 389 ProSiteProfiles Protein kinase domain profile. 50 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00828 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Blo04g00828 389 Gene3D Transferase(Phosphotransferase) domain 1 126 326 - -
Blo04g00828 389 CDD STKc_IRAK 56 320 - -
Blo04g00828 389 SUPERFAMILY Protein kinase-like (PK-like) 35 320 IPR011009 -
Blo04g00828 389 Gene3D Phosphorylase Kinase; domain 1 18 125 - -
Blo04g00828 389 Pfam Protein kinase domain 51 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00828 Blo-Chr4:8736525 Blo14g00348 Blo-Chr14:3779111 4.38E-113 dispersed
Blo04g00828 Blo-Chr4:8736525 Blo08g00161 Blo-Chr8:1664977 1.29E-114 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84247 PF00069 Pkinase 5.20E-46 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00828 - - vvi:100254237 618.616