Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00831 ATGACAAAAAACCTCCTTATCGTCGTGAATCTGAGTTCTTTCTCCCGTGACCTGGCCGTTGATGACGTCATCAAAGGTGGTAGAATTCCACCACGTGTTTTTTGCTATATAAACATCCTCCGGAGTCGCAGCTCTACATCGGATTCTGTGAATTGTAGCTTGTCACTAGAGCTGAGAGAGAGAGAGACGGAGAGACAGAGAGACAGAGCGACGCTTGCGACGGGAGTTCCGCAAATGGATGGAGCCGGCGGTAATGGAGTTGGAGTGCTGTGCAATTCGATTAATAACGAAGATTCTACTCCGTCTACCTCATCGTCTAACTACTGTTTGACTAGCTCAGAGTCAATGTCTCCCATTCTTATTTTCTTGTTCTTCCACAAAGCGATTCGCAATGAGCTGGACGAGCTGCACCGATTGGCCATGGCTTTTACCACCGCCCGTAGAGGTGATATTGGGCCGCTTCGGGAGCGGTACCAGTTTATAAGATCGATTTATAAGCACCACTCCAATGCTGAAGACGAGGTAATCTTTCCAGCACTTGATATGCGCGTGAAAAATGTAACGCAAACGTATTCCCTTGAACACAAGGGTGAAAGTCATCTTTTTCATCACCTTTTTGAGCTGTTCAATTCATTTAAGCGTGATGATGAAAGTTTTCAAAGGGAATTAGCATCCTGTACATTGGCCCTTCAAACATCAGTTAGCCAGCACATGGCCAAGGAAGAAGAACATGTATTTCCAATACTTATTGAAAATTTCTCTCATGAAGAACAAGCATCTCTGATCTGGCAGGTTTTATGCAGCATTCCAGTGGATATGATGGCTGAATTCCTTCCTTGGCTTTCTTCATCAATTTCATCTGATGAACGACAAGATTTGTACAAGTGTCTAAGAAAAATAGTTCCTCAGGAAAAACTTCTTCAAAAGATCATTTTCACATGGATGGAAAGCAAAGATATTGCTTATGTCGTTGGAAGTTGTGTACATGATTCTCGTGTCTGCGGGGATGTTGTGGCCAAGAAATCAACTCTTCGATCAGATAAAGTTAACTGGACACCTGCATCAACCACAACTGGGAAAAGGAAATTTTTTTACTCTAATCTAGATGCCTTTGATAGCATTGATAGACATCCAATTAATGATATATTACTTTGGCACAATGCTATAAAAAATGAGTGGAAGAAGATATCTCAGGAGGTTGAAAAGATAAAGCTTTCTGGAGATTTCATGGATATATCAGCATTCAATAAGAGGTTGCAATTCATTATCGAAGTTTGCATTTTTCACAGTGTTTCTAAGGACAGGGTCATATTTCCTGCAGTAGATGGAGAATTTTCTTTTCTCCGTGAACATGCCGAAGAAAAAAATCAATTTAATAAGTTCAGATATTTGATGGAAAGAATTAAGAATGTAGGTGAAAGTTCTTCTGCAACTGAACTTTACAGGGATTTGAGTTCTCATGCTATGCTAGTACTGGATTCCATGGAGAGGAACTTCGATAATGAGGACATTCAGGTCATTCCACTTGCTCGAAAGCTATTTAGCTTTAAAAAACAAAGAGAACTTTTGTATCAAAGCTTGTGTACGATGCCCTTGAAATGGATTGAACGTGTCTTACCATGGTTTGTTGGATCAATAACTGATGGTGAAGCCAGAAATTTTCTTAAAAACTTAAAATTGGCAGCTCCACTAACAGACACTGCTCTAGTGAAACTCTTTTCTGGTTGGGCTTTCAAGACTAGTAATAAACGTTCATGCTTGTCTTCAAAAGGAATTGATAGCTATTATACTGGAAATGAACTTATGCAATCATTATATTCATGTGCTTCTTCACTTGTTGGGAGAGAAAAAGCCAAAACTTCTACCATCATCACAGGGTCAAATAAACAATGTTTGTCGATTTTGTGTGCAAGATGTAGAGGCCTTAACGCTTCTGATGGTGTTTGTGTCTCACAACTATTTTGTGATGATAAATCTTGCCGTGTCTCAGGTTTTGGGGTAAACACCAATAACCTGGGTTTAAGTTCTCTTTTTACAGTTAAGTCTTTCCGATCCTTGTCTTCCAGCTTTTGTGCCCCATCTCTCAATTCCAGCCTTTTCTTATGGGAAACATATGATGGCCCTTCTGATGGTGGATCTATTGGACGGCCAATTGATACTATCTTCCAGTTCCATAAGGCCATAAGTAAAGATTTAGAATACTTAGATGTTGAATCTGGAAAACTAAGTAATTGTGATGAAACATTTCTTAGGCAATTCATTGGAAGATTGCTCCTGTTGTGGGGGTTGTACAGGGCACACAGTAATGCAGAAGACGAAATAGTGTTCCCTGCATTAGAATCCAAAGAGGCTCTACATAATGTGAGCCACTCCTACACGGTGGACCATAAGCAGGAGGAAAATTTATTTGAAGATATCGCATGTGTTCTCTCTGAGCTTTCGCTACTTCATCAAAATTTGCAGGGGTACCTTTTGGGCGAGGATTTAGACGGAAGAGGGTCGAGTAAAAGTATTGAAAAGTATAAAGAAATGGCTACAAAACTTCAAGGAATGTGCAAATTGGTCAGAGTGACTCTGGATCAGCATATTTTTAGGGAAGAACTTGAGTTGTGGCCATTGTTTGACATACATTTCTCTGTGGAAGAGCAAGACAAACTTGTTGGCCATATAATTGGGACAACAGGAGCTGAAGTTCTCCAATCTATGCTACCATGGGTAAACTCTGCACTGACACAGGAGGAACAGAATAAAATGATGAAAACGTGGAAGCAAGCCACCAAAAACACGATGTTCAATGAGTGGCTAAAGGATTGTTGGAATGGAAGCCTGGTTTCAAAATCACAAACTGAAACATTTGAAGCTAAAATTTCTCATAAAGTCCCTGAGATTCAAAGTTTGGACCAGAATGATCAGATGTTCAAACCTGGTTGGAAGGATATTTTTCGTATGAATCAAAATGAGCTTGAATCAGAGATCCACAAAGCTGATCAGGATTTGACTCTTGACCCAAGGAGAAAGGCATATCTTGTCGAGAATCTTATGACTAGTCACTGGATTGCTGCTCAGCAGAAGTTGCCTCAAGCAGAGGGAGAAACTTCCAACAGTGAAGATGTTCCTGGTTGCTCACCTTCATTTCGGGATCCAGAGAGAAATGTCTTCGGATGTGAACATTACAAAAGAAACTGCAAACTTCTAGCTGCTTGCTGTGGCAAGTTGTTTACTTGTCGGTTTTGTCATGATAATGTCAGCGACCACTCCATGGACAGGAAAGCAACATCAGAAATGATGTGTATGCTCTGTCTCAATGTCCAGCCAGTTGGACCAATATGCATTATGCCTTCTTGCAATGGCTTTTCAATGGGAAAATACTATTGCAATATTTGTAAATTTTTTGATGATGAAAGGAGCGTATATCATTGTCCATTTTGCAACTTATGCCGTGTTGGAGCTGGTCTTGGGATCGATATTTTTCATTGTATGACATGCAATTGTTGCCTTGGTACAAATTCAGTGAACCACAAATGCCTAGAGAAAGGTTTAGAGATAAATTGCCCCATTTGCTGTGACTTTTTGTTCACCTCCAGTGCACCAGTCAAACCTTTACCTTGTGGGCATTACATGCATTCAGCTTGCTTTCAGGCATACTCATGCAGCCATTACACCTGTCCAATTTGCAGCAAATCATTAGGAGATATGGCAGTTTATTTTGGCATGCTTGATGCATTGTTGGCTGCTGAGGAGCTTCCCGAGGAGTACAAGAATCTGTATCAGGTGACGATGTGGATGCATGTGCCGATGATTGATCAATTGCAATTTGACTCACTGCCAGTGAGGGGGCTCGCCACAGGGAGGGAGCTCACCTCCAGACTCCAGTGCGCTCCAGGCAACGGTCTAGAGACCGTTGCCAATGCCATCGCCCCTCGCCTGCTCGCCAACGGTCTTCAGACCGTTGCAAGAAACGGTCTGAAGACCGTTGCTTCTCTGTGA 3987 41.38 MTKNLLIVVNLSSFSRDLAVDDVIKGGRIPPRVFCYINILRSRSSTSDSVNCSLSLELRERETERQRDRATLATGVPQMDGAGGNGVGVLCNSINNEDSTPSTSSSNYCLTSSESMSPILIFLFFHKAIRNELDELHRLAMAFTTARRGDIGPLRERYQFIRSIYKHHSNAEDEVIFPALDMRVKNVTQTYSLEHKGESHLFHHLFELFNSFKRDDESFQRELASCTLALQTSVSQHMAKEEEHVFPILIENFSHEEQASLIWQVLCSIPVDMMAEFLPWLSSSISSDERQDLYKCLRKIVPQEKLLQKIIFTWMESKDIAYVVGSCVHDSRVCGDVVAKKSTLRSDKVNWTPASTTTGKRKFFYSNLDAFDSIDRHPINDILLWHNAIKNEWKKISQEVEKIKLSGDFMDISAFNKRLQFIIEVCIFHSVSKDRVIFPAVDGEFSFLREHAEEKNQFNKFRYLMERIKNVGESSSATELYRDLSSHAMLVLDSMERNFDNEDIQVIPLARKLFSFKKQRELLYQSLCTMPLKWIERVLPWFVGSITDGEARNFLKNLKLAAPLTDTALVKLFSGWAFKTSNKRSCLSSKGIDSYYTGNELMQSLYSCASSLVGREKAKTSTIITGSNKQCLSILCARCRGLNASDGVCVSQLFCDDKSCRVSGFGVNTNNLGLSSLFTVKSFRSLSSSFCAPSLNSSLFLWETYDGPSDGGSIGRPIDTIFQFHKAISKDLEYLDVESGKLSNCDETFLRQFIGRLLLLWGLYRAHSNAEDEIVFPALESKEALHNVSHSYTVDHKQEENLFEDIACVLSELSLLHQNLQGYLLGEDLDGRGSSKSIEKYKEMATKLQGMCKLVRVTLDQHIFREELELWPLFDIHFSVEEQDKLVGHIIGTTGAEVLQSMLPWVNSALTQEEQNKMMKTWKQATKNTMFNEWLKDCWNGSLVSKSQTETFEAKISHKVPEIQSLDQNDQMFKPGWKDIFRMNQNELESEIHKADQDLTLDPRRKAYLVENLMTSHWIAAQQKLPQAEGETSNSEDVPGCSPSFRDPERNVFGCEHYKRNCKLLAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMLCLNVQPVGPICIMPSCNGFSMGKYYCNICKFFDDERSVYHCPFCNLCRVGAGLGIDIFHCMTCNCCLGTNSVNHKCLEKGLEINCPICCDFLFTSSAPVKPLPCGHYMHSACFQAYSCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYKNLYQVTMWMHVPMIDQLQFDSLPVRGLATGRELTSRLQCAPGNGLETVANAIAPRLLANGLQTVARNGLKTVASL 1328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8806497 8821707 - BLOR13743 Blo04g00831 59859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00831 1328 Pfam Hemerythrin HHE cation binding domain 123 249 IPR012312 -
Blo04g00831 1328 Pfam Hemerythrin HHE cation binding domain 717 873 IPR012312 -
Blo04g00831 1328 ProSiteProfiles Zinc finger CTCHY-type profile. 1120 1183 IPR017921 -
Blo04g00831 1328 Gene3D nmb1532 protein domain like 713 937 - -
Blo04g00831 1328 SUPERFAMILY Zinc hairpin stack 1121 1177 IPR037275 -
Blo04g00831 1328 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 101 1258 - -
Blo04g00831 1328 SUPERFAMILY CHY zinc finger-like 1048 1111 IPR037274 GO:0008270
Blo04g00831 1328 PANTHER CHY ZINC FINGER PROTEIN 101 1258 - -
Blo04g00831 1328 CDD Hr-like 719 872 - -
Blo04g00831 1328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1178 1269 IPR013083 -
Blo04g00831 1328 CDD Hr-like 121 247 - -
Blo04g00831 1328 Gene3D nmb1532 protein domain like 383 526 - -
Blo04g00831 1328 Gene3D nmb1532 protein domain like 117 267 - -
Blo04g00831 1328 SUPERFAMILY RING/U-box 1182 1229 - -
Blo04g00831 1328 ProSiteProfiles Zinc finger CHY-type profile. 1048 1117 IPR008913 GO:0008270
Blo04g00831 1328 ProSiteProfiles Zinc finger RING-type profile. 1184 1226 IPR001841 -
Blo04g00831 1328 CDD Hr-like 381 508 - -
Blo04g00831 1328 CDD RING-H2_Pirh2 1183 1226 - -
Blo04g00831 1328 SMART ring_2 1184 1225 IPR001841 -
Blo04g00831 1328 Pfam CHY zinc finger 1055 1130 IPR008913 GO:0008270
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00831 Blo15g00066 CCT
Blo04g00831 Blo13g00170 CCT
Blo04g00831 Blo15g00066 ECH
Blo04g00831 Blo13g00170 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00831 Blo-Chr4:8806497 Blo13g00170 Blo-Chr13:6011704 0 dispersed
Blo15g00066 Blo-Chr15:557250 Blo04g00831 Blo-Chr4:8806497 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00831 K16276 - csv:101215023 1637.08