Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00833 ATGACGGTGAGAACTCCTGGAACGCCAGCTTCAAAGATTGAGAAGACACCGGCATCAACCCCAGGTGGACCAAGGGCTAAGGAAGAGAAAATTGTGGTTACAGTAAGGTTAAGGCCTCTAAGCAAAAAAGAGCAATTAGCAAAGGACCAAGTAGCATGGGACTGTATAGATGATTATACAATTGTGTATAAACCACTTCCTCAAGACCGTTCAACTCAACCTGCCTCATTCGCATTTGATAAAGTCTTCGGCCCAGTTTCTTCGACAGAGACAGTGTATGAAGGAATAAAGCATGTCGCATTGTCTGCTTTGATGGGCATCAATGCAACTATATTTGCCTACGGGCAAACCAGCAGTGGGAAAACTTACACTATGAGGGGAATTACTGAAAAAGCAGTTAATGATATCTACGAGCATATAATGAATACACCAGACAGAGATTTCACTATTAGAATTTCCGGACTGGAAATATATAATGAGAATGTCAGGGATCTTTTAAATTCAGAATCGGGTCGCAATCTAAAGCTTCTTGATGATCCAGAGAAAGGTACGGTGGTCGAGAAGTTGGTAGAGGAAACAGCTAGCAATGATCAGCACTTAAGACAGATGATTAGCATATGCGAGGCTCAAAGGCAAGTTGGTGAAACTGCTTTAAATGACAACAGTTCACGGTCACACCAGATAATAAGGCTGACGGTTCAAAGTACTCTGCGTGAAAATTCAGATTGTGTGAGATCTTTCGTGGCAAGCTTGAATTTTGTTGATCTAGCTGGAAGTGAAAGAGCTTCTCAAACTCATGCAGATGGTACTAGGCTAAGAGAAGGCTGCCATATCAACCTTAGCTTGATGACGCTGACGACTGTAATCAGAAAGCTCAGCGTTGGAAAAAGAAGTGGTCACGTACCTTACAGAGACTCGAAGCTTACTCGCATCCTACAGCACTCCCTTGGTGGAAACGCACGTACTGCCATCATATGTACTTTAAGTCCAGCACAAAGCCATGTCGAACAATCACGTAATACTCTCTTGTTTGCTACACGTGCAAAGGAAGTAACTAACAATGCTCAAGTGAACATGGTTGTCTCAGACAAGCAACTAGTTAAACATTTACAGAAGCAAGTGGCCAGGCTAGAAGCTGAGCTACGAACCCCTGATCCAACAAAGGACAAAGATTGGAAAATTCAACAGATGGAGATGGAAATTGAAGAACTTAGACGCCAGAGAGACCAAGCACAATCTCAAGTGGATGAGTTGCGCCAACAACTTCACAAGGACCAGCGGGTTTCAAATCTAGTTGAATCACCTCATCCTTCAGTGAAGAAGTGTCTCTCCTATACTGATGAACTATCCCAAAAACTCAACAGCAAGGACCTTAGTCGTGGCCTGGTCAGGCAATCTATGAGGCAATCATCAACTGCTCCTTTCACCCTCATGCATGAAATTCGAAAACTTGAACACCTCCAGGAGCAGCTGGGAGAAGAAGCTAATAGAGCCCTGGAAGTTTTACAGAAGGAGGTAGCTTGTCATAGATTGGGAAACCAAGATGCTGCTGAGACAATTGCCAAGTTGCAAGCGGAAATAAGAGAAATGCGCTCTGTTCACCCGACACCTAAAGAAGTTGAAGTCGGAAGTATGGTTGATACAAACAAGAGTGTGAGTGCTAATCTGAAGGAGGAGATAACTAGACTTCATTCACAGGGAAGCACTATTGCAAATCTGGAAGAGCAACTTGAAAATGTTCAAAAGTCCATTGACAGATTGGTGATGTCTCTTCCGAGTATTTATACAAATTCAAATGGCGAAGCAACTCCCAATACAAAGAATCATTCAAAAAAGAAGAAGCTACTTCCTTTGGCTTCAAGTAATGTCATTAACCAGCAGAATTTGATAGGGGTTCCCTGCTCACCTTCTTCAACTTCTCAGCAAATCATTGAATCCGAGATTGAAAATAAAGCTCCAGAAGCATATGATGTCGTCTCATCTGACACTCTGCAAGAGTCAGAAAAAGAGACTCCAACAAAGAATGAAGGTGGAGATGTCTCATCAAAGGAAAGCACTCCTGTTTATCAGAGATCAAGTTCTGTCAACATGAAGAAAATGCAGAAGATGTTCCAAAATGCTGCAGAAGAAAATGTAAAAAGCATTAGAGCTTATGTAACAGAACTCAAAGAGCGTGTGGCAAAACTGCAATACCAAAAACAGCTACTTGTATGCCAGGTGCTAGAATTGGAAGCAAATGAAGCAGCCGGGAACAATTTTGAGACTGAAGATAGTACATTTATGACTGAGGAACCGCAGATTCCTTGGCATGTAACATTTCAAGACCAAAGACAGCAAATTATTGAGTTGTGGGATTTCTGCTATGTCTCCATCATTCACCGGACTCAATTTTACTTGTTATTCAAGGGCGATCCAGCTGATCAGATTTACATGGAAGTGGAGCTTAGGCGCTTAACATGGTTACAGCAGCACCTAGCGGAACTTGGCAATGCAAGCCCTGCTCATGTGGGAGATGAACCAACCATCTCTCTATCATCAAGCGTTAAACATTTGAAACGGGAAAGAGAATTTCTCGCGAAACGATTGACTTCCCGATTAACAGTGGAGGAGAGAGATGCATTGTACATGAAATGGGACATACCACTAGAGGGAAAGCAGAGAAGGATACAATTTGTAAACAAGCTCTGGATGGATCCACATAATCCAAAACATATTCAAGAGAGTGCAGAAATAGTGGCATTGCTTGTAGGCTTCTGTGAAGGTGGAAACATGTCAAGAGAGATGTTTGAGCTCAACTTTGCTATCCCCTCTGATAAGAGGTCCTGGCTAATGGGATGGAATCCAATCTCAAACCTTCTTCATTTGTATCCACAGAAACATGGCTTCTGTTCCTTGATTTTGGAGCAGCAGAGCTTAGAAGGTGGAGATGAAGATACAATGGCGTCCATGCATGAGCTTAGCTCCGTTGGATTGCATGTTACTGCTGATGATACTTCTCCCATCAGAACAAACATTAAGGTGATGGAGTTATGGAGCTATCGAGAGACAATGGGTGGTTGTCCAGCTGGGGAGATGAGGAATAAAGGAAGGCAGAAGAGTGGGGATGTACTGGAGCTGAAGAAAGAGTGA 3129 42.79 MTVRTPGTPASKIEKTPASTPGGPRAKEEKIVVTVRLRPLSKKEQLAKDQVAWDCIDDYTIVYKPLPQDRSTQPASFAFDKVFGPVSSTETVYEGIKHVALSALMGINATIFAYGQTSSGKTYTMRGITEKAVNDIYEHIMNTPDRDFTIRISGLEIYNENVRDLLNSESGRNLKLLDDPEKGTVVEKLVEETASNDQHLRQMISICEAQRQVGETALNDNSSRSHQIIRLTVQSTLRENSDCVRSFVASLNFVDLAGSERASQTHADGTRLREGCHINLSLMTLTTVIRKLSVGKRSGHVPYRDSKLTRILQHSLGGNARTAIICTLSPAQSHVEQSRNTLLFATRAKEVTNNAQVNMVVSDKQLVKHLQKQVARLEAELRTPDPTKDKDWKIQQMEMEIEELRRQRDQAQSQVDELRQQLHKDQRVSNLVESPHPSVKKCLSYTDELSQKLNSKDLSRGLVRQSMRQSSTAPFTLMHEIRKLEHLQEQLGEEANRALEVLQKEVACHRLGNQDAAETIAKLQAEIREMRSVHPTPKEVEVGSMVDTNKSVSANLKEEITRLHSQGSTIANLEEQLENVQKSIDRLVMSLPSIYTNSNGEATPNTKNHSKKKKLLPLASSNVINQQNLIGVPCSPSSTSQQIIESEIENKAPEAYDVVSSDTLQESEKETPTKNEGGDVSSKESTPVYQRSSSVNMKKMQKMFQNAAEENVKSIRAYVTELKERVAKLQYQKQLLVCQVLELEANEAAGNNFETEDSTFMTEEPQIPWHVTFQDQRQQIIELWDFCYVSIIHRTQFYLLFKGDPADQIYMEVELRRLTWLQQHLAELGNASPAHVGDEPTISLSSSVKHLKREREFLAKRLTSRLTVEERDALYMKWDIPLEGKQRRIQFVNKLWMDPHNPKHIQESAEIVALLVGFCEGGNMSREMFELNFAIPSDKRSWLMGWNPISNLLHLYPQKHGFCSLILEQQSLEGGDEDTMASMHELSSVGLHVTADDTSPIRTNIKVMELWSYRETMGGCPAGEMRNKGRQKSGDVLELKKE 1042
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8863056 8870247 + BLOR13745 Blo04g00833 59861

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00833 1042 PANTHER KINESIN-LIKE PROTEIN KIN-7A 14 954 - -
Blo04g00833 1042 MobiDBLite consensus disorder prediction 656 692 - -
Blo04g00833 1042 MobiDBLite consensus disorder prediction 1 15 - -
Blo04g00833 1042 Coils Coil 484 504 - -
Blo04g00833 1042 Pfam Domain of unknown function (DUF3490) 773 935 IPR021881 -
Blo04g00833 1042 Coils Coil 563 590 - -
Blo04g00833 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 385 IPR027417 -
Blo04g00833 1042 Coils Coil 513 533 - -
Blo04g00833 1042 PRINTS Kinesin heavy chain signature 106 127 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo04g00833 1042 PRINTS Kinesin heavy chain signature 250 268 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo04g00833 1042 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo04g00833 1042 PRINTS Kinesin heavy chain signature 301 322 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo04g00833 1042 CDD KISc_CENP_E 30 351 - -
Blo04g00833 1042 SMART kinesin_4 28 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo04g00833 1042 MobiDBLite consensus disorder prediction 678 692 - -
Blo04g00833 1042 Coils Coil 387 428 - -
Blo04g00833 1042 MobiDBLite consensus disorder prediction 1028 1042 - -
Blo04g00833 1042 MobiDBLite consensus disorder prediction 1022 1042 - -
Blo04g00833 1042 ProSiteProfiles Kinesin motor domain profile. 30 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo04g00833 1042 Pfam Kinesin motor domain 36 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Blo04g00833 1042 MobiDBLite consensus disorder prediction 663 677 - -
Blo04g00833 1042 MobiDBLite consensus disorder prediction 1 27 - -
Blo04g00833 1042 ProSitePatterns Kinesin motor domain signature. 249 260 IPR019821 GO:0003777|GO:0005524|GO:0007018
Blo04g00833 1042 PANTHER CENTROMERE PROTEIN E 14 954 - -
Blo04g00833 1042 Coils Coil 360 380 - -
Blo04g00833 1042 Gene3D Kinesin motor domain 23 382 IPR036961 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00833 K11498 CENPE; centromeric protein E - qsu:112006687 1569.29
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo04g00833 Blo16g00131 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00833 Blo-Chr4:8863056 Blo18g00788 Blo-Chr18:22760359 0 dispersed
Blo08g00487 Blo-Chr8:11503995 Blo04g00833 Blo-Chr4:8863056 8.94E-12 transposed
Blo16g00862 Blo-Chr16:36156137 Blo04g00833 Blo-Chr4:8863056 0 transposed
Blo16g00131 Blo-Chr16:2970456 Blo04g00833 Blo-Chr4:8863056 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g285 Blo04g00833 Blo16g00131 . . . Bpe13g00360 Bma06g00050 . Cmo13g01049 Cmo18g00040 . . . . . Cpe20g00132 . . . . . . . . . . . . . . . . . . . Lsi02g00207 Csa01g00689 Chy12g01421 Cme12g01857 . . Bda11g01773 . . Bpe15g00531 Bma03g00900 . . . . Cma13g01010 Cma18g00049 Car13g00845 Car18g00043 Cpe09g01132 . Bhi08g01257 . . . . . . Cla04g01075 Cam04g1119 Cec01g1632 Cco01g1678 Clacu04g1145 Cmu04g1126 Cre01g1427 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001397 1 1 3 3 2 2 3 2 2 1 2 2 3 2 2 3 2 2 3 2 2 2 2 3 4 2 1 10 2 2 73
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo04g00833 Blo_Chr04 FPKM 22.352409 25.384838 19.501774 17.920425 11.550932 10.311301 10.560006 14.55883 14.266474 14.23212