Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00881 ATGGAATATGAAGAACGATCGTTGGGGGATACACCCACCTGGGCTGTCGCAACAGTCATCTCTATAATTGTTGCGTTTGGATTCTTCTTTCAGGTTTCTCTGAAACGGTTCGGAAAGTGGTTGGATGAGACTAAGAGGAAATCTCTACTTGCTGCACTTGAAAAGATTAAGCAAGCAGAGCTAATGCTTTTCGGACTTTTGTCCCTAATTATGGGTCACTGGATTGTGTTTGTGGCGAAGATTTGTATTAAATCCTCTGTCTTGAGCACTCGATTTTATCCTTGTGCTTCGAAGGATGATAGTCTATCATTAGAACGCCTTCGTTCTTTGATTGAGTACTCAAATAACTCATTTTCTAAGGGGATGATGGCAGCCCGAAGGCATGATTACTGCGCTGAGGGTCATGAATCTTTTGCATCCTACGCAAGCCTTGAGCAGCTACATAGATTCATATTTGTTCTTGGCATTACACATGTTTCTTACAGCTTTGTTGCCGTTGCCCTCACTATGATTAAGATTTACAGCTGGAGAAGATGGGAAAGTGAAGCCAATTCTCTGGCCATTCAAACCTTACCAGATGCTCCAGAGGCTGTTGGGGATGCCACAAAGTTGAGACGACTATCGACTTTCATTTTTCACCATGCATCTCATCCATGGAGTCGGCACAAAGTTTTTGTTTGGCTGGTTTATAGGAACATGCAGCTTTGCTTCAGCCGCCAGTTTTGGAGTTCTATAAATCGAGCTGATTACATGGCTTTGCGTTTAGGCTTTATTACGAATCATCAGCTTCCTTTACGGTATAACTTCCATAATTACATGCTTCGAAGTATGGAGGAAGAGTTTCGAGATATTATCGGAATAAGTGTGCCTCTTTGGATATACGCCATTGCTTGCATTTTCCTCAATTTTCACGGAAGCAATACATATTTTTGGCTTTCTTTTCTTCCAGTCATTTTGGTTTTGCTAATGGGAACAAAATTACACCGCGTGGTCGTAAAATTGGCCGTGGAAATCATGGATAATTGTCTGATAAATGAGTTTCATCACTTTAACCTGAGGGATGAGCTCTTTTGGTTTGGCAAGCCAAAGCTTCTTTTATGGCTGATTCAAGTTATATCCTTTCAGAATGCTTTTGAGATGGCTACCTTCCTTTGGTCACTGTGGGAGATTAACGATCCTTCCTGTTTCATGGATAACCGAACTTACCTTATAATCCGCTTGGTGTTTGGGACCATCTCTCAAATTTGGTGTAGCTTTGTTACTTTCCCACTTTACGTCATCATTACTCAGATGGGTTCGAGGTTTAAGAAATCGATACTGTCGGAAAATATTAGAAAATCACTTCATGGGTGGAAGAGACGAGTGGAGAAGGCGAGGCAAAGCTCTAAGTCCACCATTACTATGGGAACAACCTCACTTTCAGTTTCCAACTCTGATATGGACGACACACATCATCAAATCGACAATTTGCCTTCAAACGGCATTGAAGAAGATGACACCATAAATTCCCACATTTCATCTGTCACGAATTGGCAAACGTCCAGCTCGATATCTCACAGAGACAGTGAAGCATTTGAACCATCACTAAACGATGACCGGGACCATTCCAGCAGCGAAGAAGAGGAGCAGTCAAATCCGGAGAATACAGTTGGATTGCTGACAATGGCTGGAAAAGGGGTTTGCGTTTTGGTAACTCCAACTAGTGATCTTGGAAAGATTCTGGCATGTATGCATGGTTTAGAGACAGGAGGTGAGATGAACCTGGCTGCTGGAATCCAGGTTGCCCAGTTGGCTCTTAAGCATCGGCAGAATAAAAAGCAGCAGCAAAGGATTATCGTCTTTGCTGGAAGTCCTATTAAACATGAAAAAAAGTTGTTGGAGACGATAGGAAGGAAGCTAAAGAAGAACAGTGTGGCACTTGATATCATTGATTTCGGTGAAGAAGAAGATGAGAAGCCAGAGAAGCTTGAAGCACTTCTTGCCGCAGTCAACAATAATAACACCAGCCACATTGTGCATGTTCCAACTGGTCCAAATGCTCTTTGTGATGTACTTATTAGTACTCCTATCTTCCCTGGAGATGGGGAGGGAGGAAGTGGATTTGTAGCTGCAGCTGGTGGTATATCTGGTTTTGATTTTGGTGTAGATCCGAATTTAGATCCTGAACTTGCCCTTGCTCTTAGAGTTTCAATGGAAGAAGAAAGGGCAAGACAAGAAGCAGCTGCTAAAAAGGCTGCAGAGGATGCTGCCAAGCAGGACAACGGAGTTGAACAGTCATCTGTCTTGCAGGATGCATCCATGACTGAACGTTCTGGTGCTGCAACTTCTGAATTTGAGAATAAAACTGATTTAACGGATGATGAGAATGCTCTGCTACAGCAGGCCCTTGCAATGTCAATGGATGATCCCGCTTCTAGCCATGAAATTCAGGACGCAGATATGTCTGATGTTGTTGCAGATGATCCAGAGTTGGCTCTTGCTCTTCAGTTATCTGTGCAGGATGGTGCAAAAGATTCCGATAGCCAGACAGATATGAGTAAGTTGTTGGCTGACCAGTCTTTTGTGTCTTCTATCCTCGCCTCGCTTCCAGTGGTCGATCCAAACGACCCGTCAGTTAAAGATTTGCTTGCTTCCATGCAAAGCCAGTCAGAAGTAAGTTTCTCTAACTTGTTATGGGCTAGGTGA 2685 43.13 MEYEERSLGDTPTWAVATVISIIVAFGFFFQVSLKRFGKWLDETKRKSLLAALEKIKQAELMLFGLLSLIMGHWIVFVAKICIKSSVLSTRFYPCASKDDSLSLERLRSLIEYSNNSFSKGMMAARRHDYCAEGHESFASYASLEQLHRFIFVLGITHVSYSFVAVALTMIKIYSWRRWESEANSLAIQTLPDAPEAVGDATKLRRLSTFIFHHASHPWSRHKVFVWLVYRNMQLCFSRQFWSSINRADYMALRLGFITNHQLPLRYNFHNYMLRSMEEEFRDIIGISVPLWIYAIACIFLNFHGSNTYFWLSFLPVILVLLMGTKLHRVVVKLAVEIMDNCLINEFHHFNLRDELFWFGKPKLLLWLIQVISFQNAFEMATFLWSLWEINDPSCFMDNRTYLIIRLVFGTISQIWCSFVTFPLYVIITQMGSRFKKSILSENIRKSLHGWKRRVEKARQSSKSTITMGTTSLSVSNSDMDDTHHQIDNLPSNGIEEDDTINSHISSVTNWQTSSSISHRDSEAFEPSLNDDRDHSSSEEEEQSNPENTVGLLTMAGKGVCVLVTPTSDLGKILACMHGLETGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPIKHEKKLLETIGRKLKKNSVALDIIDFGEEEDEKPEKLEALLAAVNNNNTSHIVHVPTGPNALCDVLISTPIFPGDGEGGSGFVAAAGGISGFDFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEDAAKQDNGVEQSSVLQDASMTERSGAATSEFENKTDLTDDENALLQQALAMSMDDPASSHEIQDADMSDVVADDPELALALQLSVQDGAKDSDSQTDMSKLLADQSFVSSILASLPVVDPNDPSVKDLLASMQSQSEVSFSNLLWAR 894
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10026084 10039987 - BLOR13793 Blo04g00881 59909

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00881 894 MobiDBLite consensus disorder prediction 738 785 - -
Blo04g00881 894 Gene3D von Willebrand factor, type A domain 535 687 IPR036465 -
Blo04g00881 894 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 787 806 IPR003903 -
Blo04g00881 894 MobiDBLite consensus disorder prediction 512 547 - -
Blo04g00881 894 PANTHER MLO-LIKE PROTEIN 3 522 - -
Blo04g00881 894 Coils Coil 728 748 - -
Blo04g00881 894 Pfam von Willebrand factor type A domain 543 616 IPR002035 -
Blo04g00881 894 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 718 737 IPR003903 -
Blo04g00881 894 MobiDBLite consensus disorder prediction 524 542 - -
Blo04g00881 894 MobiDBLite consensus disorder prediction 461 480 - -
Blo04g00881 894 Pfam Mlo family 5 472 IPR004326 GO:0006952|GO:0016021
Blo04g00881 894 SMART uim 819 838 IPR003903 -
Blo04g00881 894 SMART uim 787 806 IPR003903 -
Blo04g00881 894 SMART uim 718 737 IPR003903 -
Blo04g00881 894 SUPERFAMILY vWA-like 543 678 IPR036465 -
Blo04g00881 894 MobiDBLite consensus disorder prediction 459 499 - -
Blo04g00881 894 Gene3D - 716 805 - -
Blo04g00881 894 MobiDBLite consensus disorder prediction 753 779 - -
Blo04g00881 894 PANTHER MLO-LIKE PROTEIN 1 3 522 IPR004326 GO:0006952|GO:0016021
Blo04g00881 894 Pfam Ubiquitin interaction motif 787 802 IPR003903 -
Blo04g00881 894 Pfam Ubiquitin interaction motif 820 834 IPR003903 -
Blo04g00881 894 Pfam Ubiquitin interaction motif 720 733 IPR003903 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00881 K08472 MLO; mlo protein - jre:108997698 685.641
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo04g00881 Blo16g00083 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01541 Blo-Chr3:42884633 Blo04g00881 Blo-Chr4:10026084 2.93E-92 dispersed
Blo03g01542 Blo-Chr3:42937782 Blo04g00881 Blo-Chr4:10026084 5.11E-94 dispersed
Blo04g00881 Blo-Chr4:10026084 Blo03g01272 Blo-Chr3:39033336 2.36E-95 dispersed
Blo02g01183 Blo-Chr2:43526333 Blo04g00881 Blo-Chr4:10026084 2.28E-146 transposed
Blo16g00083 Blo-Chr16:2219208 Blo04g00881 Blo-Chr4:10026084 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1131 Blo04g00881 Blo16g00083 . . Bpe15g00475 Bpe13g00411 . Bma15g00911 . . . . . . . . . . . . . . . . . . . . . . . . Cone12ag0818 . . . . . . . . Bda11g01831 . . . Bma03g00957 . . . . Cma16g01241 . . . . . . . . . . . . . . . . . . . Lsi07g01097 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006348 3 0 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 2 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo04g00881 Blo_Chr04 FPKM 2.535607 2.861371 4.839351 3.945983 6.040505 5.016891 5.791747 9.668279 8.713882 7.272521