Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00893 ATGGCTGCCGTAACGGGGCTCTTTTGGTTTATCGCTCTGATCGCACCTGTCTTAGCGTCTGCCAAGCAAGGCGCTGAAATCCAATCTGAGATCGCCGCATTGACTTCTTTTAAGATGAATCTGCTAGACCCTTTAGGCGCATTGAGCAACTGGAACTCTTCTTCCCCGTTGGCTCCTTGCGACTGGCGGGGAGTCGTCTGCTCCGACGACCGGGTTACAGAGCTTCTTCTGCAGCGTCTTCAACTCACCGGCCCGATCACTGACCGCCTCTCTGAGGTGCACATGTTGCGCAAGCTGAACCTCCGGTCCAACGCCTTCAATGGCACCATTCCGGCCTCCCTCTCCAAATGTACGTCGCTCCAAGAAGTGTTATTACAGTACAACTCACTTTCCGGCGGCATCCCACTGGAGATCGCAAACCTCACAAATCTCCAAACTCTCAGCTTGGCGCAAAACATGCTTTCCGGCGCAATCCCCGGCGTCCTTCCGACTAATCTGAACTACTTAGATCTTTCGTCAAACTCATTATCCGGCGAGATACCCAAAAATATCTCTAGCTTGGCCTATCTCAAGCTCATTAACTTCTCGTACAACCAGTTGGGCGGAGAGATTCCTCCGAGTTTCGGTCAACTTCATAACCTTCAATACCTTGTCCTCGATTATAATATTTTGGGAGGGACTCTACCTTCTGCCATAGCCAATTGTTCATCCCTACTACATTTGAGCGTCGAAAGGAACTCGCTCAGAGGCGTAATTTCAGCATCCATTGGAGCTCTTCCAAACCTTCAAGTGGTTTCTCTATCACATAATAGTCTTTCCGGTTCAGTCCCTTCCTCATTTTTCTGCAACGCCACGCTTTCTCCGCCGTCCCTTCAAGTCGTTCAGTTAGGCTTTAATGCATTCACGGAACTCGGCGGGCCGCAGGAAGCGACTTGTTTTAGCGTTCTTCAGGTTTTGGATCTTCAGCGAAATCAAATAACCGGCTCGTTTCGCTCCTGGTTAACACAGATTTCCACTCTGACAACGCTGGACATATCAGGTAACTCCTTTTCCGGCGAGATTTCGACAGACATTGGAAAGCTCTTGATGTTGGAAGAATTGAAAATGGCAGATAATTTATTTACTGGAAAAATTCCTGATTCTTTTTCTCATATCAATGGATTAAAGGTTTTATCTTTAGGAGGAAACTCCTTCTCAGGCTCTGCTCCTCTTAGTATTGCCAATCTATTAAAGCTTGAAACTTTGAATTTAGGGGGAAATGATTTGAGTGGAAGCTTCTTAATCGAGTTAATCGGACTAACGAATTTGACTACATTGGATCTCAGCGGAAACAATTTCTCCGGCAAAATTCCGGCCGGTATTAACAATTTGAATCAGTTGGTTAGTCTCAACTTAAGTAATAGTGGGTTTTCTGGATATATACCGTCGGGCTTGGGAAACCTTCTCAAGCTGACCACTCTTGATTTAAGCAAACAGAGTCTCTCCGGTGAGTTGCCGTTTGAGCTTTTCGGTTTACCAAATTTGCAAGTGATTGAGTTGCAGGAAAACATGTTATCCGGCGATCTTCCCGAAGGCTTCAGTAGCTTAATGGGTTTAAGCCATTTGAACCTTAGTCTCAATCGTTTCACAGGAAGTATTTCGTCGAATTTCGGTTTTCTTAGCTCATTAGCTATTCTTTCTCTCTCTGGCAATCAAATTATTGGGGATTTACCACAGGAGATCGGAAACTGCTCTGATCTTCGAGTCCTGGAGCTCCGGTCAAATTTATTGGTAGGACACATTCCTAGTGAACTCTCCCGCTTAACTTATTTGAAAGATTTGGATTTGGGCGTGAACAATTTCAGTGGAGAAATACCAGAAGAAATCTCACGCTGCTTATCGCTTAACAAATTGCTTCTAAATGGAAATAATCTCTACGGCATAATACCCAGTTCGTTTTCCAAGCTATCGAACTTAACAGCTCTTGATTTTTCAGCCAACCATCTAAGTGGGGCAATTCCTGCTGGTCTGAATTTGATTCCCGGGTTGGTGAGTTTCAACGTCTCTAGCAATAATCTCGAAGGTGAGATTCCAGTGGCTCTAGGATCAAGATTCAATAACCCCTCCGTGTTTGCTTATAATCTGAAATTGTGCGGAGAGCCATTGAATAGAAGATGCGATGATAAGGCCGAGAAGGATAGGAAGAAGAAGCTGATTCTTTTGATTGCAGTGGCTGCCACTGGAGCTTGCCTTCTGTTTTTGTGCTGTTGCTTTTACATTTACAGTCTCTTGAAATGGCGGACCAAGCTCAAAGGAAAGCTATCTGGAGAGAAGCGGAAGAGTCCAGCAAGAGTGAGCTCAGCCGCAGCAAGCGGCGGACGGGGAAGCTCAGATATCGGAGGACCGAGACTGGCGTTGTTTAACGACATGATTACAGTAGCGGAGACAGTAGAGGCGACGAGGCAATTCGATGAAGAAAATGTTCTGAGTAGGACTAGATATGGGCTGGTTTTTAAAGCTTGTTATAACGATGGAATGGTGCTTTCGATCCGTCGCCTCGCAGATAATTCAATTGATGAAAACGTGTTCAGAAATGAAGCCGAAATACTGGGAAAATTAAAGCACCGAAATATCACCGTTCTCCGGGGCTATTACGCCGGACCACCGCCGGATTTGAGACTCCTCGCATATGACTACATGCCGAATGGAAACCTTGCGACCCTTTTGCAGGAAGCTTCTCACCAAGATGGGCAAGTGCTTAATTGGCCTATGCGCCACCTCATTGCCATCGGAATCGCTCGTGGTCTGGCTTATCTTCACAGCTCCGCCGTGGTTCACGGCGACGTTAAGCCACAGAACATCCTATTCGACGCCGATTTCGAAGCCCATTTGTCCGATTTTGGGTTAACTCGTTTTACAGCCGCCGTTTCCACTCCCGTTGGCACGGTGGGATACGTTTCACCGGAAGCGGCTATAACCGGGGAAGTGACGAAGGAATCTGATATCTACAGCTTTGGTATACTGATTCTAGAGCTTCTTTCTGGAAAACGGCCGGTGATGTTCTCAGAAGACGAAGATTTGGTGAAGTGGGTGAAGAAACAGTTGCAAATGGGTCAAATTACAGAATTATTGGAACCGGGTTTGCTCAAACTTGATCCAGAATCCTTGGAATGGGACGAGTTCTTGCTTGGAATCAAAGTGGGATTGCTTTGCACCGCTGCCGATCCTTTCGATCGACCCCCAATGTTGGAAGTGGTCTTCATGCTCGAAGGTTGCCGAATTCGACCAGAAGTTTCCTCCTCCGCCAATCCTGCATCTCAATCATCACCGGCGGAAGCTGACAACCGACTATAA 3333 46.5 MAAVTGLFWFIALIAPVLASAKQGAEIQSEIAALTSFKMNLLDPLGALSNWNSSSPLAPCDWRGVVCSDDRVTELLLQRLQLTGPITDRLSEVHMLRKLNLRSNAFNGTIPASLSKCTSLQEVLLQYNSLSGGIPLEIANLTNLQTLSLAQNMLSGAIPGVLPTNLNYLDLSSNSLSGEIPKNISSLAYLKLINFSYNQLGGEIPPSFGQLHNLQYLVLDYNILGGTLPSAIANCSSLLHLSVERNSLRGVISASIGALPNLQVVSLSHNSLSGSVPSSFFCNATLSPPSLQVVQLGFNAFTELGGPQEATCFSVLQVLDLQRNQITGSFRSWLTQISTLTTLDISGNSFSGEISTDIGKLLMLEELKMADNLFTGKIPDSFSHINGLKVLSLGGNSFSGSAPLSIANLLKLETLNLGGNDLSGSFLIELIGLTNLTTLDLSGNNFSGKIPAGINNLNQLVSLNLSNSGFSGYIPSGLGNLLKLTTLDLSKQSLSGELPFELFGLPNLQVIELQENMLSGDLPEGFSSLMGLSHLNLSLNRFTGSISSNFGFLSSLAILSLSGNQIIGDLPQEIGNCSDLRVLELRSNLLVGHIPSELSRLTYLKDLDLGVNNFSGEIPEEISRCLSLNKLLLNGNNLYGIIPSSFSKLSNLTALDFSANHLSGAIPAGLNLIPGLVSFNVSSNNLEGEIPVALGSRFNNPSVFAYNLKLCGEPLNRRCDDKAEKDRKKKLILLIAVAATGACLLFLCCCFYIYSLLKWRTKLKGKLSGEKRKSPARVSSAAASGGRGSSDIGGPRLALFNDMITVAETVEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLADNSIDENVFRNEAEILGKLKHRNITVLRGYYAGPPPDLRLLAYDYMPNGNLATLLQEASHQDGQVLNWPMRHLIAIGIARGLAYLHSSAVVHGDVKPQNILFDADFEAHLSDFGLTRFTAAVSTPVGTVGYVSPEAAITGEVTKESDIYSFGILILELLSGKRPVMFSEDEDLVKWVKKQLQMGQITELLEPGLLKLDPESLEWDEFLLGIKVGLLCTAADPFDRPPMLEVVFMLEGCRIRPEVSSSANPASQSSPAEADNRL 1110
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10285800 10289132 - BLOR13805 Blo04g00893 59921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00893 1110 Gene3D Ribonuclease Inhibitor 307 429 IPR032675 -
Blo04g00893 1110 Gene3D Transferase(Phosphotransferase) domain 1 893 1102 - -
Blo04g00893 1110 SMART LRR_sd22_2 313 342 - -
Blo04g00893 1110 SMART LRR_sd22_2 505 534 - -
Blo04g00893 1110 SMART LRR_sd22_2 433 459 - -
Blo04g00893 1110 SMART LRR_sd22_2 649 672 - -
Blo04g00893 1110 SMART LRR_sd22_2 163 186 - -
Blo04g00893 1110 SMART LRR_sd22_2 553 572 - -
Blo04g00893 1110 SMART LRR_sd22_2 141 156 - -
Blo04g00893 1110 Pfam Leucine rich repeat 164 222 IPR001611 GO:0005515
Blo04g00893 1110 Pfam Leucine rich repeat 627 686 IPR001611 GO:0005515
Blo04g00893 1110 Pfam Leucine rich repeat 364 422 IPR001611 GO:0005515
Blo04g00893 1110 PRINTS Leucine-rich repeat signature 166 179 - -
Blo04g00893 1110 PRINTS Leucine-rich repeat signature 259 272 - -
Blo04g00893 1110 SMART serkin_6 816 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00893 1110 SUPERFAMILY L domain-like 58 425 - -
Blo04g00893 1110 ProSitePatterns Serine/Threonine protein kinases active-site signature. 937 949 IPR008271 GO:0004672|GO:0006468
Blo04g00893 1110 Pfam Protein kinase domain 826 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00893 1110 SMART LRR_typ_2 433 457 IPR003591 -
Blo04g00893 1110 SMART LRR_typ_2 211 235 IPR003591 -
Blo04g00893 1110 SMART LRR_typ_2 313 332 IPR003591 -
Blo04g00893 1110 SMART LRR_typ_2 505 528 IPR003591 -
Blo04g00893 1110 SMART LRR_typ_2 553 577 IPR003591 -
Blo04g00893 1110 SMART LRR_typ_2 259 282 IPR003591 -
Blo04g00893 1110 SMART LRR_typ_2 601 625 IPR003591 -
Blo04g00893 1110 SMART LRR_typ_2 93 117 IPR003591 -
Blo04g00893 1110 SMART LRR_typ_2 649 673 IPR003591 -
Blo04g00893 1110 SMART LRR_typ_2 141 165 IPR003591 -
Blo04g00893 1110 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 306 1100 - -
Blo04g00893 1110 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 382 - -
Blo04g00893 1110 MobiDBLite consensus disorder prediction 1092 1110 - -
Blo04g00893 1110 Gene3D Phosphorylase Kinase; domain 1 796 892 - -
Blo04g00893 1110 Gene3D Ribonuclease Inhibitor 163 304 IPR032675 -
Blo04g00893 1110 MobiDBLite consensus disorder prediction 1091 1110 - -
Blo04g00893 1110 ProSiteProfiles Protein kinase domain profile. 816 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00893 1110 PANTHER LRR RECEPTOR-LIKE KINASE 306 1100 - -
Blo04g00893 1110 PANTHER LRR RECEPTOR-LIKE KINASE 12 382 - -
Blo04g00893 1110 SUPERFAMILY RNI-like 354 717 - -
Blo04g00893 1110 SUPERFAMILY Protein kinase-like (PK-like) 803 1090 IPR011009 -
Blo04g00893 1110 Gene3D Ribonuclease Inhibitor 27 162 IPR032675 -
Blo04g00893 1110 Pfam Leucine Rich repeat 434 448 IPR001611 GO:0005515
Blo04g00893 1110 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Blo04g00893 1110 Gene3D Ribonuclease Inhibitor 430 728 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00893 Blo-Chr4:10285800 Blo06g00322 Blo-Chr6:18467782 0 dispersed
Blo04g01270 Blo-Chr4:26308534 Blo04g00893 Blo-Chr4:10285800 3.02E-13 dispersed
Blo08g00252 Blo-Chr8:3200394 Blo04g00893 Blo-Chr4:10285800 5.00E-93 dispersed
Blo18g00787 Blo-Chr18:22736496 Blo04g00893 Blo-Chr4:10285800 0 wgd
Blo04g00893 Blo-Chr4:10285800 Blo05g00823 Blo-Chr5:29975002 1.83E-55 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84251 PF00069 Pkinase 2.40E-35 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00893 - - cmax:111478744 1418.68