Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00894 ATGCGGGCCCTTTGTGACTCCTGCGAAACTGCACCAGCAATTGTGTTTTGCGCCGCCGACGAAGCTGCCCTTTGCGGCACCTGTGACGAGAAGAATGAAAGATATCCAATTCATATGATGAATATCTATGCAACTACATTATCTGTGGTTGAACTCCATTTCTGTAAATCAAGATTGCAAAAATTTAAACATATTGTTTTGGTCCATTTGTGTAATAAGCTTGCTAAGCGACATATAAGGGTAGGACTAGCGAATCCAAGTGATGTTCCTCATTGTGATATATGCGAAAATTCACCCGCATTCTTCTACTGCGAGGTAGATGGCAGTTCCCTTTGTTTGCAGTGCGATACACTTGTTCACGTCGGGGGTAAAAGAACTCATAAAAGATACCTTCTGCTAAGGCAGAGAGTCGAGTTTCCGGGCGACAAACTTGGTGTTCTTGATGATCCAGCTCCACCAACCACCGATGGTGCTGAGACGAGACGATTACTAAATCAACCACAGAAAGTTACTGAGGGAGAGAGGCGGCCAAGTGATTCCCAATTGTCTGATCCGTATGATGTTGATGATGGGCTTGTTGAGACGGATACTGCAATGATTGATCTGAACATGAAGCCTCATCGGAATCCTGGACAAGCTTCAAATGATCAGGTGCGAGGGGATTTTGAGAAATGGAAATCGCGGGCAGATTGA 693 44.88 MRALCDSCETAPAIVFCAADEAALCGTCDEKNERYPIHMMNIYATTLSVVELHFCKSRLQKFKHIVLVHLCNKLAKRHIRVGLANPSDVPHCDICENSPAFFYCEVDGSSLCLQCDTLVHVGGKRTHKRYLLLRQRVEFPGDKLGVLDDPAPPTTDGAETRRLLNQPQKVTEGERRPSDSQLSDPYDVDDGLVETDTAMIDLNMKPHRNPGQASNDQVRGDFEKWKSRAD 230
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10317171 10318333 + BLOR13806 Blo04g00894 59922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00894 230 MobiDBLite consensus disorder prediction 203 230 - -
Blo04g00894 230 CDD Bbox1_BBX-like 92 132 - -
Blo04g00894 230 CDD Bbox1_BBX-like 4 83 - -
Blo04g00894 230 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 219 - -
Blo04g00894 230 MobiDBLite consensus disorder prediction 168 183 - -
Blo04g00894 230 SMART bboxneu5 87 132 IPR000315 GO:0008270
Blo04g00894 230 SMART bboxneu5 1 52 IPR000315 GO:0008270
Blo04g00894 230 ProSiteProfiles Zinc finger B-box type profile. 87 132 IPR000315 GO:0008270
Blo04g00894 230 MobiDBLite consensus disorder prediction 143 190 - -
Blo04g00894 230 Pfam B-box zinc finger 89 128 IPR000315 GO:0008270
Blo04g00894 230 ProSiteProfiles Zinc finger B-box type profile. 1 33 IPR000315 GO:0008270
Blo04g00894 230 PANTHER B-BOX ZINC FINGER PROTEIN 19 1 219 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00894 Blo06g00321 CCT
Blo04g00894 Blo06g00321 ECH
Blo04g00894 Blo16g00074 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00894 Blo-Chr4:10317171 Blo06g00321 Blo-Chr6:18407264 7.47E-77 dispersed
Blo01g01583 Blo-Chr1:55642228 Blo04g00894 Blo-Chr4:10317171 8.33E-12 wgd
Blo16g00074 Blo-Chr16:2107024 Blo04g00894 Blo-Chr4:10317171 1.14E-95 wgd
Blo18g00789 Blo-Chr18:22814417 Blo04g00894 Blo-Chr4:10317171 7.60E-15 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12315 PF00643 zf-B_box 2.00E-07 No_clan Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00894 - - tcc:18610806 248.054