Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00897 ATGTCGAAGACGTCTTTGATGACGCCAACAGAGCGGTACGCGGCGGGAGCATTGTTCGCACTCGCTCTTCACCAGGCTCAGATCCACCAAACTCGTCCTCTTGGCTTCTGCGCCGATGAAGATCTCTCCGATGATAGAACTAGTTGTAGCAGCAGCAGCAGTGACTCGGTTTCGGGAGACCCCGATCTTTGGGTTAACGAAAGTTCTGGCCTTCTCCGTCCAGTTTTCAGGTTCTTTGAAATAAGCTCGGTGGCGTGGTCTGGACTTGAAGAAACGGCAGGGTCTCCTTCAGCTAAACATCATGTCGGAGCATTTTTGAGGATGCTTTCTGAAGAAAATGGTGATAATTCTTCTCAAAGGTTAGATCAGGAGCTTGCTCTTTCAAAAGCAGTGGATGGCATGGTGTTAAGTATGGAAAATGACCCTGAAGTATTCTTCTCAAAGAAGGAAAAACATCGTGAATATGAAAATGAACGCCGTGAAAAATGCCTCACTGCTGAGCAGCTCGCAAACACTGAATCAGTTGATGGGCATTCAGAAAATCAACCACTGTTGGATGATAGGAATTTTAACATTAGCAGAGCTGTTGATGGGCCTATGGTTGAAAACAATGAACAACCTGTCGAAGAGGAAAGAATGCTCAGTTATCAGAGAAAAGTGACAATTTTGTATGAGCTACTTTCAGCTTGTTTGGCAGATGCTCGTGAAGATGACAAAAAATGTACCCGGAGAAGAATGGGGTATGATGCACGACATCGCGTTGCTTTACGGTTGCTCTCAACTTGGCTTGATATTAAGTGGAAAAATATGGAAGCCATTGAGACGATCGTTGCTTGCTCTGCAATGGCTCTAGCAAAAAATGAAGAAGGAAAGCAAGCAGAAACTAGTGTGCAGGCAAACAAATGGGAGAGATGGAAGAGAGGTGGTATAATTGGTGCAGCTGCATTAACTGGAGGAGCTTTGATGGCAATCACTGGCGGTTTAGCTGCCCCTGCAATTGCTGCTGGGTTTAGTGCCCTAGCTCCAACATTGGGCACCCTCATTCCTGTCATTGGAGCTAGTGGATTTGCAGCAGCTGCAAGTGCTGCAGGAACAGTTGCTGGTTCTGTTGCTGTTGCAGCATCTTTTGGGGCCGCTGGAGCGGGTCTCACAGGTACCAAAATGGCTCGAAGAACAGGAAGTGTTGATGAATTTGAATTCAGATCCATTGGAGAGAACCATAATCAAGGGAGATTGGCGGTTGGGATTTTGGTCTCAGGTTTTGTGTTTGATGAGGAAGACTTTATAAGACCATGGGAAGGTCTGAATGACAACTTGGAAAGGTATGCACTACAATGGGAGTCTCAGAATCTAATTGCAGTGAGCACTGCTATTCAGGATTGGCTAACTTCAAGAATCGCAATGGAGCTGATGAAGCAAGGAGCAATGTTGACTGTATTAAGCACTCTCTTGGCAGCACTTGCATGGCCTGCTGCCTTACTTGCAATTACTGATTTTATAGATAGCAAATGGACAATTGCAGTGGACAGATCAGACAAGGCAGGAAAACTGCTTGCTGAGGTTCTGATGAAAGGCTTGCAGGGGAACAGGCCTGTAACACTTGTTGGCTTCTCACTTGGTGCACGTGTGCTTTTCAAGTGTCTTCAATACTTGGCTAAGAGCAAAAAGAATGCTGGGCTTGTGGAAAGAGTTGTCCTCCTTGGAGCACCAATTTCAATTAAAGATCAGAACTGGGAAGCTGCAAGAAAGATGGTGGCGGGAAGATTTGTGAATGCTTACTCAACAAACGATTGGATGCTTGGCGTTACCTTCCGTGCCAGTCTACTTACACAAGGATTAGCTGGAATCCAACCAATTGATATCTGTGGCATTGAAAATATTGATGTAACTGATCTAATAGAAGGCCACTCTTCATATCTTTGGGCAACGCAACAAATCCTTGATCGGCTTGAACTCGATACCTATTATCCCGTTTTCAGGACCTTTCCAATTGTTATTGCAAATTAA 2007 45.14 MSKTSLMTPTERYAAGALFALALHQAQIHQTRPLGFCADEDLSDDRTSCSSSSSDSVSGDPDLWVNESSGLLRPVFRFFEISSVAWSGLEETAGSPSAKHHVGAFLRMLSEENGDNSSQRLDQELALSKAVDGMVLSMENDPEVFFSKKEKHREYENERREKCLTAEQLANTESVDGHSENQPLLDDRNFNISRAVDGPMVENNEQPVEEERMLSYQRKVTILYELLSACLADAREDDKKCTRRRMGYDARHRVALRLLSTWLDIKWKNMEAIETIVACSAMALAKNEEGKQAETSVQANKWERWKRGGIIGAAALTGGALMAITGGLAAPAIAAGFSALAPTLGTLIPVIGASGFAAAASAAGTVAGSVAVAASFGAAGAGLTGTKMARRTGSVDEFEFRSIGENHNQGRLAVGILVSGFVFDEEDFIRPWEGLNDNLERYALQWESQNLIAVSTAIQDWLTSRIAMELMKQGAMLTVLSTLLAALAWPAALLAITDFIDSKWTIAVDRSDKAGKLLAEVLMKGLQGNRPVTLVGFSLGARVLFKCLQYLAKSKKNAGLVERVVLLGAPISIKDQNWEAARKMVAGRFVNAYSTNDWMLGVTFRASLLTQGLAGIQPIDICGIENIDVTDLIEGHSSYLWATQQILDRLELDTYYPVFRTFPIVIAN 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10417997 10423109 + BLOR13809 Blo04g00897 59925

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00897 668 Pfam Protein of unknown function (DUF726) 304 652 IPR007941 -
Blo04g00897 668 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 3 661 - -
Blo04g00897 668 SUPERFAMILY alpha/beta-Hydrolases 520 580 IPR029058 -
Blo04g00897 668 Gene3D alpha/beta hydrolase 459 652 IPR029058 -
Blo04g00897 668 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 3 661 IPR007941 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00897 - - - mnt:21409370 894.034
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g1076 Blo04g00897 . . . Bpe15g00416 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone8ag0836 Cone12ag0730 . . . . Chy07g01269 . . . . . . . Bma03g00972 . . . . . . . . . . . . . . . . . . . . . . . . . Csa04g00532 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008264 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 3 1 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo04g00897 Blo_Chr04 FPKM 13.002692 16.538139 11.669544 11.46378 16.090979 16.807859 19.286081 10.46869 10.008261 10.839861