Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00904 ATGTTGGCACACGTTGGTATTATGCCCCAGAGGTACTATTGGGTTGTGATAGCTATGGAACTTGCGATTGACATATGGTCTGTTGGTTGTATATTCGTTGAAATTCTTGGGAGAACCCCCATCTTTCCGGGCACTGACATTATGAATCAGTTGAAACTATTCATTGTCATTCTCGGTAGTCAACAAGAAGAAGATTTGGAGTTTATCAAGAGTCCAAAGTTGAAAAAGTACATAAAATGTCTTCCTTTTTCCATGGGAGTGGACTTTTCGCATGCATATCCTTGTGGGGATCCTCTAGCCTTAGATTCGTTGGAAAAAATGTTTATTTTCAATCCAACTAAAAGAATTTATGCATTAGAAGCACTTCAACATCCCTATTTGGCCGAATTCTATGACCCCAAATATGATCCACCAGCTCGACTTGTTATCCATCTCGATGTAGACAACACCGTCAACAAAGATATGATCAGCGAGATGATTTTGAAGGAGATGTTTTATTATCATCCAAAAGCTGTTAGATATTTCTTGAAGAAATTATAA 540 37.96 MLAHVGIMPQRYYWVVIAMELAIDIWSVGCIFVEILGRTPIFPGTDIMNQLKLFIVILGSQQEEDLEFIKSPKLKKYIKCLPFSMGVDFSHAYPCGDPLALDSLEKMFIFNPTKRIYALEALQHPYLAEFYDPKYDPPARLVIHLDVDNTVNKDMISEMILKEMFYYHPKAVRYFLKKL 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10618787 10619326 - BLOR13816 Blo04g00904 59932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00904 179 Pfam Protein kinase domain 22 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00904 179 SUPERFAMILY Protein kinase-like (PK-like) 20 134 IPR011009 -
Blo04g00904 179 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 20 175 - -
Blo04g00904 179 Gene3D Transferase(Phosphotransferase) domain 1 21 148 - -
Blo04g00904 179 Gene3D Phosphorylase Kinase; domain 1 149 169 - -
Blo04g00904 179 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 20 175 - -
Blo04g00904 179 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00904 Blo-Chr4:10618787 Blo10g00866 Blo-Chr10:27391602 3.01E-70 dispersed
Blo16g00057 Blo-Chr16:1939798 Blo04g00904 Blo-Chr4:10618787 4.09E-63 wgd
Blo18g00803 Blo-Chr18:23452152 Blo04g00904 Blo-Chr4:10618787 1.94E-59 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84252 PF00069 Pkinase 5.20E-10 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00904 K20535 K20537 zju:107424681 201.445