Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g00912 | ATGACAAAATCGTTATTAAGTTATGTGGAATTGAAGAAACAAGCAATGAAAGACATGGAAGCCGATTCCGACATAGAAACAGGCCAACTCAATCCTGCCGCTGAACATTATCTCTCCAAGTTCTTTGAAGAAGCGGGCCAAGTCAAAACTGAAATGGAAGAGATCACCAATCTCTTGATCGAACTTCAAACACTCAATGAGGAGGCGAAGTCCATTTTCAGCGCCAAGATTCTTGGTGGGCTAAGAGATCGAATGGATTCAAACATGGTTTCAATCCTTCGCAAAGCAAAGAGGGTGAAGTCTAGGCTGGAAGCGCTCGATCGATCCAACGTAAAAAATGGAAGAAATTCAGAAGCCTTTAAAGAAAGCAGTCATGTTGACAGAATCAGGATTTCTGTCACTAACGGTTTAAGAGTCAAGCTGAGAGAATTGATGAATGATTTTCAGTTCTTGAGAGAGAAAATTCTACGCGATCATAAGGAAGATCTAAGGAGGACGTACTACACTGCAACAGGCGAGCAACTGAGTGAGGAAGTGATTGAGAAAATAGTCATGGGGGGCGAGAGAATTGACTTATTTCAGGGTAATAAAGCCAAACACCAGGCTGTTTTAGAGGTTCAGAGGAGCTTGAATAAGCTTCATCAGGTTTTTCTCGACATGGCTATGCTTGTTGAGACGCAGGAAGAAAAAATGAATGACATTGAGGAGAATGTAGCCAATGCAAGTTGCTCCATCAATGGCGGAACTAACAGTCTCTACTATGCCAATCAGACTAAGAAAAACAAGAAATGGGCGTATTGGGTCGCAGCTGTTGTACTGATCATAGTGCTGGTTTGCTTCATTGCTACACTAGTTTCTTGA | 861 | 42.04 | MTKSLLSYVELKKQAMKDMEADSDIETGQLNPAAEHYLSKFFEEAGQVKTEMEEITNLLIELQTLNEEAKSIFSAKILGGLRDRMDSNMVSILRKAKRVKSRLEALDRSNVKNGRNSEAFKESSHVDRIRISVTNGLRVKLRELMNDFQFLREKILRDHKEDLRRTYYTATGEQLSEEVIEKIVMGGERIDLFQGNKAKHQAVLEVQRSLNKLHQVFLDMAMLVETQEEKMNDIEENVANASCSINGGTNSLYYANQTKKNKKWAYWVAAVVLIIVLVCFIATLVS | 286 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 10701857 | 10702717 | + | BLOR13824 | Blo04g00912 | 59940 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g00912 | 286 | CDD | SynN | 38 | 190 | IPR006011 | GO:0016020 | |
Blo04g00912 | 286 | PANTHER | SYNTAXIN-112 | 7 | 282 | - | - | |
Blo04g00912 | 286 | PANTHER | SYNTAXIN | 7 | 282 | IPR045242 | - | |
Blo04g00912 | 286 | Pfam | Syntaxin | 40 | 227 | IPR006011 | GO:0016020 | |
Blo04g00912 | 286 | Gene3D | - | 34 | 163 | - | - | |
Blo04g00912 | 286 | CDD | SNARE_syntaxin1-like | 197 | 252 | - | - | |
Blo04g00912 | 286 | Gene3D | - | 190 | 286 | - | - | |
Blo04g00912 | 286 | SUPERFAMILY | t-snare proteins | 36 | 248 | IPR010989 | GO:0016020|GO:0016192 | |
Blo04g00912 | 286 | Coils | Coil | 224 | 244 | - | - | |
Blo04g00912 | 286 | SMART | SynN_4 | 33 | 160 | IPR006011 | GO:0016020 | |
Blo04g00912 | 286 | SMART | tSNARE_6 | 188 | 255 | IPR000727 | - | |
Blo04g00912 | 286 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 193 | 255 | IPR000727 | - | |
Blo04g00912 | 286 | Coils | Coil | 48 | 72 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo04g00912 | Blo16g00051 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g00912 | Blo-Chr4:10701857 | Blo08g00183 | Blo-Chr8:2085505 | 3.16E-51 | dispersed | |
Blo01g00722 | Blo-Chr1:9192879 | Blo04g00912 | Blo-Chr4:10701857 | 1.12E-116 | transposed | |
Blo15g00703 | Blo-Chr15:22339372 | Blo04g00912 | Blo-Chr4:10701857 | 4.69E-113 | transposed | |
Blo16g00051 | Blo-Chr16:1903083 | Blo04g00912 | Blo-Chr4:10701857 | 5.74E-132 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g00912 | K08486 | - | jre:108997509 | 369.392 |