Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00914 ATGGCAAGCGGGTGCAAACTCATCTCTGCTTTAGCCTTTTTCTTCTTCGGGTTCATTGGCTTAGCCTCATTTCCTGCAGAAGCTGCATTAAAGAGTTATCAGTTTGATATTCAAGTGAAGAGCGTAAGCAGACTATGCCATGCAAAACCAATCGTAACAGTAAACGGCAGGTTTCCAGGTCCAACAATCTATGCCAGAGAAGGAGACAGAGTTGTCGTCAATGTCACAAACCATGCACAATATAACATGTCAATTCACTGGCATGGACTGAAGCAATATAGAAATGGGTGGGCAGACGGGCCAGCTTACATTACACAATGCCCGATTCAAACGGGCCATAGCTATGCATACAACTTCAATGTGACAGGACAGAGAGGAACCTTCTGGTGGCATGCTCATATTCTATGGCTGAGGGCTACTGTTTATGGTGCAATTGTAATCATGCCGAAACTAGGAACTCCATTTCCTTTCTCGCAACCAAATAGAGAGTTCGAGCTTCTGTTAGGAGAATGGTGGAATAATGATGTGGAAGAAGTTGAGAAGCAAGGGAGTATGATGGGGTTGCCACCAAACATGTCAGATGCACATACAATCAACGGGAAGCCAGGGCCATTGTTTCCATGCTCTTTGAAAAATAAAGTCTTCAAAAGTTACTTCTTTCATGTTTTAGATACTTATGCTATGGAGGTGGAAGAAGGAAAGACATACCTTCTGAGAATCATCAACGCTGCCCTCAATGATGAGCTTTTCTTCGCCATAGCTGGTCATAACATGACAGTGGTGGAGGTTGATGCAGTTTATACAAAGCCATTCACTACGCAAGCTATACTAACTGCACCAGGCCAGACCACAAACGTCCTAGTTCAAGCCAACCAAGCTCCGAACAGATATTTCATGGCCACAAGGCCTTTCCTCGACGTTCCAATTGCAATCGACAACAAAACAGCCACTGCAATTCTTCAATACAAAGGCGTTCCAAATACTGTTCTTCCAAGCCTTCCTCAGTTACCTGCGCCTAATGACACTGAGTTTGCTTTAGGCTATGACAACAAGCTCAAGAGCTTAAACTCACCGCAGTTTCCTGCTAATGTTCCCCTGAAGGTAGATCGAAAGCTCTTTTACACCATCGGTTTGGGCATGAATGCCTGCCCCACATGCTTGAATGGGACCAGATTTCTTGCTTCTTTGAACAACATCTCGTTCGTGATGCCCAGTGTTGGTCTTCTTCAAGCTCACTATTTCAACATCAAAGGGGTATTCAGAACTGACTTCCCTGACAAGCCTCCAACTAGTTTCAACTACACTGGTGCACCCCTCACTGCTAATCTTGGCACTACAGTGGGCACAAGGCTGAGCAAGCTTGCATTTAATTCAACTGTTGAGCTGGTGCTTCAAGATACCAATCTTTTGACAGTAGAATCACACCCATTTCATCTCCATGGCTACAACTTCTTCGTCGTAGGGACGGGGATTGGGAATTTTGATCCTGTCAAAGACCCACCTAAATATAACTTAGTCGATCCTGTTGAGAGAAATACTGTTGGGGTTCCCACTGGAGGCTGGACAGCCATTCGATTCCAAGCTGATAATCCAGGGGTTTGGTTCATGCATTGTCATCTGGAGCTTCATACAGGTTGGGGTTTGAAGACTGCATTTGTGGTGGAAAATGGTCCGGGGAAGGATCATACAATTCGTCCCCCACCCAAGGATCTTCCACAATGCTAA 1725 45.1 MASGCKLISALAFFFFGFIGLASFPAEAALKSYQFDIQVKSVSRLCHAKPIVTVNGRFPGPTIYAREGDRVVVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIQTGHSYAYNFNVTGQRGTFWWHAHILWLRATVYGAIVIMPKLGTPFPFSQPNREFELLLGEWWNNDVEEVEKQGSMMGLPPNMSDAHTINGKPGPLFPCSLKNKVFKSYFFHVLDTYAMEVEEGKTYLLRIINAALNDELFFAIAGHNMTVVEVDAVYTKPFTTQAILTAPGQTTNVLVQANQAPNRYFMATRPFLDVPIAIDNKTATAILQYKGVPNTVLPSLPQLPAPNDTEFALGYDNKLKSLNSPQFPANVPLKVDRKLFYTIGLGMNACPTCLNGTRFLASLNNISFVMPSVGLLQAHYFNIKGVFRTDFPDKPPTSFNYTGAPLTANLGTTVGTRLSKLAFNSTVELVLQDTNLLTVESHPFHLHGYNFFVVGTGIGNFDPVKDPPKYNLVDPVERNTVGVPTGGWTAIRFQADNPGVWFMHCHLELHTGWGLKTAFVVENGPGKDHTIRPPPKDLPQC 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10706325 10708452 - BLOR13826 Blo04g00914 59942

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00914 574 PANTHER MULTI-COPPER OXIDASE 10 574 IPR045087 -
Blo04g00914 574 TIGRFAM laccase: laccase 29 574 IPR017761 GO:0046274|GO:0048046|GO:0052716
Blo04g00914 574 PANTHER LACCASE 10 574 - -
Blo04g00914 574 Pfam Multicopper oxidase 166 324 IPR001117 -
Blo04g00914 574 Gene3D - 21 149 IPR008972 -
Blo04g00914 574 SUPERFAMILY Cupredoxins 365 574 IPR008972 -
Blo04g00914 574 SUPERFAMILY Cupredoxins 158 341 IPR008972 -
Blo04g00914 574 Gene3D - 383 574 IPR008972 -
Blo04g00914 574 Gene3D - 161 357 IPR008972 -
Blo04g00914 574 CDD CuRO_3_LCC_plant 419 557 IPR034289 GO:0005507
Blo04g00914 574 SUPERFAMILY Cupredoxins 30 174 IPR008972 -
Blo04g00914 574 ProSitePatterns Multicopper oxidases signature 1. 532 552 IPR033138 -
Blo04g00914 574 CDD CuRO_1_LCC_plant 33 149 IPR034288 GO:0005507
Blo04g00914 574 Pfam Multicopper oxidase 424 556 IPR011706 GO:0005507|GO:0016491
Blo04g00914 574 ProSitePatterns Multicopper oxidases signature 2. 537 548 IPR002355 GO:0005507
Blo04g00914 574 CDD CuRO_2_LCC_plant 166 322 IPR034285 -
Blo04g00914 574 Pfam Multicopper oxidase 37 150 IPR011707 GO:0005507
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00914 K05909 E1.10.3.2; laccase [EC:1.10.3.2] - fve:101314321 1002.28
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo04g00914 Blo16g00049 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01165 Blo-Chr3:38005705 Blo04g00914 Blo-Chr4:10706325 0 dispersed
Blo03g01200 Blo-Chr3:38300902 Blo04g00914 Blo-Chr4:10706325 0 dispersed
Blo04g00914 Blo-Chr4:10706325 Blo09g00260 Blo-Chr9:11507880 0 dispersed
Blo06g00108 Blo-Chr6:4421824 Blo04g00914 Blo-Chr4:10706325 3.07E-83 dispersed
Blo06g00109 Blo-Chr6:4433084 Blo04g00914 Blo-Chr4:10706325 2.00E-23 dispersed
Blo16g00479 Blo-Chr16:18917996 Blo04g00914 Blo-Chr4:10706325 6.45E-170 dispersed
Blo03g01520 Blo-Chr3:42082762 Blo04g00914 Blo-Chr4:10706325 3.48E-36 transposed
Blo03g01521 Blo-Chr3:42086905 Blo04g00914 Blo-Chr4:10706325 2.78E-28 transposed
Blo16g00049 Blo-Chr16:1896281 Blo04g00914 Blo-Chr4:10706325 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g988 Blo04g00914 Blo16g00049 . . Bpe15g00426 Bpe13g00441 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag1630 Cone9ag1555 . . . . . . Bda11g01862 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000013 13 15 12 14 11 15 17 15 13 14 14 15 22 14 16 19 15 33 6 15 14 14 15 20 18 14 13 15 19 34 484
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo04g00914 Blo_Chr04 FPKM 0.917505 1.349943 0.756326 1.269948 1.799164 1.434387 2.529355 0.696745 0.850574 0.954925