Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00916 ATGGAGATAGGTTATAATTTACAAAATAGGGAGTCTTCGTCCAAGCTGACTTCTACACCCTTCGCTCAAACAGTTGAAGAAAAAACAAGCGATGAAACAATTGAACATGGAGAAACAGCTTCCAATCCTCCTCAAACCCTAGACCAGAATTACCTCACTTATCATCTTCATCACCACCATCATTTTCCTCACAGTCCACAATTGAATCCTCCTCCAGAGATTTCCGGCAACTACAGCAGAGATCCACACCCCAACCGGCCAGATCTGGGGCCAGCTCCAACTACTCCACCGGCCGGAAGATTGAACTCGGGAACCCCATCGCAACCTGGAGCTTCGACTAGTGTAACTATTTCCTCTCCAGTTCGATATCGAGAATGTTTAAAGAACCATGCGGCGAGTATAGGCGGATACGTTCTCGATGGGTGTGGAGAATTCATGCCGAACGGAGAAAGTATAGAAGGTTTGAAATGTGCAGCCTGCGATTGCCATCGTAACTTTCACCGGAAAGAGACCGACGGCGAGCCTCCAGTTCCGTCTTCGGCGAACTGTTACTACCCCTACAGCTCGAACAACACCACCACACGAAGAAGCGATCTAAGAATGGTTCCTCCACCTTCCCATCTCCACCATCAGGGACCACTCTCTCTCGGGCCACCGGCGCCGATGATGATGGCCTTTGGAAGTTCCGGTGGAGCTGCACCGGAGTCTTCCAGCGAAGAACTATCTATACCACAATCATCAAAAAAGCGGTTTCGGACAAAATTTACAAATGAACAGAAAGATAAGATGATGGAGTTCGCTGAAAAACTGGGATGGAAGATTCAGAAGCATGATGACGAAGAGGTGGAGCAATTCTGTACTGAAGCGGGCGTAAAGAGGCAGGTTTTGAAGGTATGGATGCATAACAATAAGCCAGCCATAAAAAAACATCAAATGTAA 939 47.5 MEIGYNLQNRESSSKLTSTPFAQTVEEKTSDETIEHGETASNPPQTLDQNYLTYHLHHHHHFPHSPQLNPPPEISGNYSRDPHPNRPDLGPAPTTPPAGRLNSGTPSQPGASTSVTISSPVRYRECLKNHAASIGGYVLDGCGEFMPNGESIEGLKCAACDCHRNFHRKETDGEPPVPSSANCYYPYSSNNTTTRRSDLRMVPPPSHLHHQGPLSLGPPAPMMMAFGSSGGAAPESSSEELSIPQSSKKRFRTKFTNEQKDKMMEFAEKLGWKIQKHDDEEVEQFCTEAGVKRQVLKVWMHNNKPAIKKHQM 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10741087 10742025 - BLOR13828 Blo04g00916 59944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00916 312 SUPERFAMILY Homeodomain-like 236 310 IPR009057 -
Blo04g00916 312 MobiDBLite consensus disorder prediction 36 52 - -
Blo04g00916 312 MobiDBLite consensus disorder prediction 1 116 - -
Blo04g00916 312 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 248 304 IPR006455 -
Blo04g00916 312 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 123 170 IPR006456 -
Blo04g00916 312 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 55 310 - -
Blo04g00916 312 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 55 310 - -
Blo04g00916 312 MobiDBLite consensus disorder prediction 98 116 - -
Blo04g00916 312 MobiDBLite consensus disorder prediction 194 249 - -
Blo04g00916 312 Pfam ZF-HD protein dimerisation region 121 171 IPR006456 -
Blo04g00916 312 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 122 170 IPR006456 -
Blo04g00916 312 MobiDBLite consensus disorder prediction 1 27 - -
Blo04g00916 312 Gene3D - 233 308 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00916 Blo16g00046 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00916 Blo-Chr4:10741087 Blo17g00796 Blo-Chr17:25617141 1.11E-61 dispersed
Blo12g00721 Blo-Chr12:25540007 Blo04g00916 Blo-Chr4:10741087 4.61E-34 dispersed
Blo17g00244 Blo-Chr17:2439156 Blo04g00916 Blo-Chr4:10741087 1.18E-40 dispersed
Blo16g00046 Blo-Chr16:1874806 Blo04g00916 Blo-Chr4:10741087 2.34E-170 wgd
Blo18g00811 Blo-Chr18:23935729 Blo04g00916 Blo-Chr4:10741087 1.89E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12319 PF04770 ZF-HD_dimer 5.00E-28 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00916 - - qsu:111998832 283.108