Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00926 ATGTCTTCCACATATATGCAGTTCCATGCAGCCCACGCAAACATAAAGGCCCTTCCATCATTACTTCCAAAAGCCCCCCCGCCCTCCGACTACGAAGCTCCTGTTCTAACAGAGACGACGCCCTTTTCTTGGAACATGAGAGTCCCTGCCGATTCATCTACCCACCCCAAACTTAATCTTTCCCGGAATATCGGATTTCCGACTCATTCTGGTATAATTACAAACTTGTGCCACGAACCCACCTCCGTTTTGGACCTGCATCGAAGCCCTAGCCCGGTTACCGATAAACCGCCCTCTAATCCTGATACGTCAGCCGCCGCAAACGCCTTGTCTCTGGGAGAAGAACCTCATCTGGAGTGGGATGAGCATGTGCTGCATAATCTGGACTGGGACTCTATTATGAAGGATTTAGGCTTGCATGATGATTCTGTTCCTGCTTTGAAGAATAATTCTGCTTCTGATCCTGATCAAAATCCACAGGAATTGCTTCAGTCGCAGCCCTTTGATCCTCCTCAGGCTTTTAACCACGATTTGAATCTCCATGATCTTTACGTTACTCATAACTTTACTTCGTCTGATAATGTTCATCATGGCGGTGGAAATTGCAACATTGGGTTTGAATTTATAGAAGATATTATACGAGCAGCTGGGTGTTTCGACTCGAACGAGTTGCAACTCGCCCACTCAATATTGGATCAACTGAACCAACGCCTTCAGTTTTCTGCCGGAAAGCCAATCCAAAGAGCGGCTTTCTACTTCAAGGTAGCTCTGCAATCGCTTCTCTCCGGTTCGAACCGGCCTGCTCGTCTTTCTTGCTGGTCGGACATAGTTAACACCATCAAAGCTTATAAAGCTTTCTCTGCTATCTCTCCGATCCCTATGTTTTCTCACTTTACTGCCAATCAAGCTCTTCTCGAAGCACTTAATGGGTCATTTTTCATTCATATCATCGACTTTGATATCGGCCTCGGCGGTCAATACGCATCGTTCATGAAGGAAATATCGGAAAAGGCCGAGTCTCGTAAAATAAGCCCCCCGGTTCTACGAATTACGGCTGTTGTGCCAGAAGAATATGCCGTCGAAAGCAGATTGATCAGAGAAAATCTCCACCAGTTCGCTCAGGATCTCAAAATTAGATTCATCATAGATTTCGTGCTTCTTCGCACCTTCGAAACGTTGTCGTTCAAGGCGATTAAATTCTTGGACGGAGAGAAGGCTGCTATTATGTTAACTCCGACTATCTTTCGCCGCCTCAGCTCCACAAACGGCATCGCTGCCTTTCTTAGTGATGTGAGAAAGCTATCCCCATGCGTCGTCGTTTTCGTCGACAGCGAAGGCTGGACAGATAGCGGTACGGCGTCGTTTAAGAGGGATATCGTTGACGGACTTGAGTTTTACTCGATGATGCTGGAATCACTGGACGCATCGGAGATCCGCGGAGATTGGATTCGGAAGATTGAGACGCATGTTCTCCGACCGAAGATTTTGTCGGCGGTAGAAGGCGCGGGGACAAGGTCCTCTCCCGTGGCGAGGGAGGTGTTTCACAGGGCAGGAATGCGGCCAGTGCTGCTGAGTCAGTTCGCAGACTTCCAAGCGGAGTGTTTACTGAGGGAGGTTCAGGTCCGAGGGTTCCACGTGGCAAAAAGACAGGCTGAGCTGGTGCTGTGCTGGCAGGAGACGGCCCTAGTAGCCACATCAGCTTGGAGGTGTTGA 1713 48.8 MSSTYMQFHAAHANIKALPSLLPKAPPPSDYEAPVLTETTPFSWNMRVPADSSTHPKLNLSRNIGFPTHSGIITNLCHEPTSVLDLHRSPSPVTDKPPSNPDTSAAANALSLGEEPHLEWDEHVLHNLDWDSIMKDLGLHDDSVPALKNNSASDPDQNPQELLQSQPFDPPQAFNHDLNLHDLYVTHNFTSSDNVHHGGGNCNIGFEFIEDIIRAAGCFDSNELQLAHSILDQLNQRLQFSAGKPIQRAAFYFKVALQSLLSGSNRPARLSCWSDIVNTIKAYKAFSAISPIPMFSHFTANQALLEALNGSFFIHIIDFDIGLGGQYASFMKEISEKAESRKISPPVLRITAVVPEEYAVESRLIRENLHQFAQDLKIRFIIDFVLLRTFETLSFKAIKFLDGEKAAIMLTPTIFRRLSSTNGIAAFLSDVRKLSPCVVVFVDSEGWTDSGTASFKRDIVDGLEFYSMMLESLDASEIRGDWIRKIETHVLRPKILSAVEGAGTRSSPVAREVFHRAGMRPVLLSQFADFQAECLLREVQVRGFHVAKRQAELVLCWQETALVATSAWRC 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10972110 10973822 + BLOR13838 Blo04g00926 59954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00926 570 Pfam GRAS domain family 210 569 IPR005202 -
Blo04g00926 570 MobiDBLite consensus disorder prediction 144 171 - -
Blo04g00926 570 MobiDBLite consensus disorder prediction 83 106 - -
Blo04g00926 570 ProSiteProfiles GRAS family profile. 199 569 IPR005202 -
Blo04g00926 570 MobiDBLite consensus disorder prediction 146 171 - -
Blo04g00926 570 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 65 569 IPR005202 -
Blo04g00926 570 PANTHER SCARECROW-LIKE PROTEIN 15 65 569 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00395 Blo-Chr2:4825121 Blo04g00926 Blo-Chr4:10972110 7.01E-62 dispersed
Blo04g00926 Blo-Chr4:10972110 Blo07g00058 Blo-Chr7:849320 2.28E-65 dispersed
Blo04g00926 Blo-Chr4:10972110 Blo12g00171 Blo-Chr12:11174103 6.12E-66 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12323 PF03514 GRAS 9.60E-86 CL0063 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00926 - - cpep:111811752 648.277