Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00927 ATGAAGGATCAAGCTGAAGATCAGAGGGAACTTATTTCGCAGTTTTGCAACCGGAGATACACTCAAATGGCACCGCAACAAGGAGTACCGGAGGTAATGAAGCCGAAACGGCGACGTAGGAAGGTGAGGACAGGAGGAGGAGAAAGAAAGAAGAGGAAGCTTAGCGATGAGCAGGTGAATTTTCTGGAGATGAACTTCGGAAATGAACATAAATTGGAGTCGGAAAGGAAAGATCGGCTGGCTTCCGAACTGGGTCTTGACCCTCGACAAGTGGCTATCTGGTTTCAGAACCGGAGAGCGCGTTGGAAGAACAAGAAGCTCGAGGAAGAATACTCCATTTTGAAGAGCTCTCATCAGTCTGCTCTCCTTGACAAATGCCGTCTTGAATCTGAGATGATGCAGCTGAAAGAGCAGCTGGAAGAAGCGAAGAAGGAGATTCAAAGGCTGTCTAACATGGGTGCTGATAATGGAGCTTCAAGCAACAGTCCAAGCTCATCCCTCTCAGTGGAAGAAGCTCCATTTTTGGGGGAATTGGGGCTTGAATATGTTTTTGACATGCCTGCACAGTCGCAGAATACTTACTATCATGGCATGGAATGGATTCACCATCTCTGCATATGA 621 47.18 MKDQAEDQRELISQFCNRRYTQMAPQQGVPEVMKPKRRRRKVRTGGGERKKRKLSDEQVNFLEMNFGNEHKLESERKDRLASELGLDPRQVAIWFQNRRARWKNKKLEEEYSILKSSHQSALLDKCRLESEMMQLKEQLEEAKKEIQRLSNMGADNGASSNSPSSSLSVEEAPFLGELGLEYVFDMPAQSQNTYYHGMEWIHHLCI 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10974191 10975139 - BLOR13839 Blo04g00927 59955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00927 206 Coils Coil 125 152 - -
Blo04g00927 206 CDD homeodomain 49 106 IPR001356 GO:0003677
Blo04g00927 206 MobiDBLite consensus disorder prediction 16 54 - -
Blo04g00927 206 ProSiteProfiles 'Homeobox' domain profile. 45 105 IPR001356 GO:0003677
Blo04g00927 206 ProSitePatterns 'Homeobox' domain signature. 80 103 IPR017970 GO:0000981|GO:0006355
Blo04g00927 206 Gene3D - 42 113 - -
Blo04g00927 206 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-40-LIKE 5 202 - -
Blo04g00927 206 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 5 202 IPR045224 GO:0003700
Blo04g00927 206 SUPERFAMILY Homeodomain-like 47 116 IPR009057 -
Blo04g00927 206 Pfam Homeodomain 49 104 IPR001356 GO:0003677
Blo04g00927 206 PRINTS Lambda-repressor HTH signature 76 85 IPR000047 GO:0003677
Blo04g00927 206 PRINTS Lambda-repressor HTH signature 85 101 IPR000047 GO:0003677
Blo04g00927 206 MobiDBLite consensus disorder prediction 34 48 - -
Blo04g00927 206 SMART HOX_1 47 109 IPR001356 GO:0003677
Blo04g00927 206 Coils Coil 97 117 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00927 Blo06g00125 CCT
Blo04g00927 Blo16g00037 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00927 Blo-Chr4:10974191 Blo06g00125 Blo-Chr6:5047383 1.62E-44 dispersed
Blo16g00037 Blo-Chr16:1764352 Blo04g00927 Blo-Chr4:10974191 5.30E-81 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12324 PF00046 Homeodomain 4.60E-17 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00927 K09338 - csin:114281220 218.009