Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00929 ATGAGTGCAACAGTCAATCTGACGAGCCCACCGTCTCCGGATAACATGTCCGATAGTGGTTCCAAAGAGCAGGACAAGTTTCTTCCCATTGCCAACGTTGGCCGTATCATGAAGAAATCTCTCCCCCCCAACGCTAAAATATCCAAGGAAGCCAAAGAAACCGTCCAGGAATGTGTTTCGGAGTTCATTAGCTTCATCACCGGAGAAGCTTCCGATAGGTGTCGTCGTGAGAAGAGGAAGACGATCAACGGAGATGATCTTTTGTGGGCCATGACCACCCTCGGTTTCGAAAATTACGTCGGACCCTTGAAAGTTTACCTCGGCAAGTTCAGAGAAACTGAAGAAGAAGAAGAAGACTCTCTCCCAAAGCCCTCCTCGGTCCCCACCCAACTCTCGTATCCTTCCGCTTTTACAGCGAACGCTGACCTTCAGAACTCTAATGGTAGAGTCATCAGCTATGGAGACAACCTCAACAATATAGCTTTCAAGGTCAATAATGGAGATGCGAATGGGAGTAGAGCCATGGCGACTCATCTACATCATGGATCAGACTGA 555 48.29 MSATVNLTSPPSPDNMSDSGSKEQDKFLPIANVGRIMKKSLPPNAKISKEAKETVQECVSEFISFITGEASDRCRREKRKTINGDDLLWAMTTLGFENYVGPLKVYLGKFRETEEEEEDSLPKPSSVPTQLSYPSAFTANADLQNSNGRVISYGDNLNNIAFKVNNGDANGSRAMATHLHHGSD 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10990813 10991367 - BLOR13841 Blo04g00929 59957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00929 184 MobiDBLite consensus disorder prediction 1 25 - -
Blo04g00929 184 ProSitePatterns NF-YB/HAP3 subunit signature. 58 74 IPR003956 GO:0005634|GO:0006355|GO:0043565
Blo04g00929 184 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Blo04g00929 184 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Blo04g00929 184 PRINTS CCAAT-binding transcription factor subunit A signature 93 111 - -
Blo04g00929 184 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 11 176 IPR027113 GO:0001228|GO:0006355|GO:0016602
Blo04g00929 184 Gene3D Histone, subunit A 14 131 IPR009072 GO:0046982
Blo04g00929 184 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11 11 176 - -
Blo04g00929 184 MobiDBLite consensus disorder prediction 1 18 - -
Blo04g00929 184 SUPERFAMILY Histone-fold 24 130 IPR009072 GO:0046982
Blo04g00929 184 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 27 91 IPR003958 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00929 Blo-Chr4:10990813 Blo10g00864 Blo-Chr10:27339437 3.58E-55 dispersed
Blo04g00929 Blo-Chr4:10990813 Blo02g00141 Blo-Chr2:1233511 3.61E-58 transposed
Blo04g00929 Blo-Chr4:10990813 Blo15g00440 Blo-Chr15:6493752 4.79E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12325 PF00808 CBFD_NFYB_HMF 1.20E-26 CL0012 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00929 K08065 - csv:101214273 213.001