Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g00929 | ATGAGTGCAACAGTCAATCTGACGAGCCCACCGTCTCCGGATAACATGTCCGATAGTGGTTCCAAAGAGCAGGACAAGTTTCTTCCCATTGCCAACGTTGGCCGTATCATGAAGAAATCTCTCCCCCCCAACGCTAAAATATCCAAGGAAGCCAAAGAAACCGTCCAGGAATGTGTTTCGGAGTTCATTAGCTTCATCACCGGAGAAGCTTCCGATAGGTGTCGTCGTGAGAAGAGGAAGACGATCAACGGAGATGATCTTTTGTGGGCCATGACCACCCTCGGTTTCGAAAATTACGTCGGACCCTTGAAAGTTTACCTCGGCAAGTTCAGAGAAACTGAAGAAGAAGAAGAAGACTCTCTCCCAAAGCCCTCCTCGGTCCCCACCCAACTCTCGTATCCTTCCGCTTTTACAGCGAACGCTGACCTTCAGAACTCTAATGGTAGAGTCATCAGCTATGGAGACAACCTCAACAATATAGCTTTCAAGGTCAATAATGGAGATGCGAATGGGAGTAGAGCCATGGCGACTCATCTACATCATGGATCAGACTGA | 555 | 48.29 | MSATVNLTSPPSPDNMSDSGSKEQDKFLPIANVGRIMKKSLPPNAKISKEAKETVQECVSEFISFITGEASDRCRREKRKTINGDDLLWAMTTLGFENYVGPLKVYLGKFRETEEEEEDSLPKPSSVPTQLSYPSAFTANADLQNSNGRVISYGDNLNNIAFKVNNGDANGSRAMATHLHHGSD | 184 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 10990813 | 10991367 | - | BLOR13841 | Blo04g00929 | 59957 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g00929 | 184 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Blo04g00929 | 184 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 58 | 74 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 | |
Blo04g00929 | 184 | PRINTS | CCAAT-binding transcription factor subunit A signature | 74 | 92 | - | - | |
Blo04g00929 | 184 | PRINTS | CCAAT-binding transcription factor subunit A signature | 55 | 73 | - | - | |
Blo04g00929 | 184 | PRINTS | CCAAT-binding transcription factor subunit A signature | 93 | 111 | - | - | |
Blo04g00929 | 184 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 11 | 176 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Blo04g00929 | 184 | Gene3D | Histone, subunit A | 14 | 131 | IPR009072 | GO:0046982 | |
Blo04g00929 | 184 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11 | 11 | 176 | - | - | |
Blo04g00929 | 184 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Blo04g00929 | 184 | SUPERFAMILY | Histone-fold | 24 | 130 | IPR009072 | GO:0046982 | |
Blo04g00929 | 184 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 27 | 91 | IPR003958 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g00929 | Blo-Chr4:10990813 | Blo10g00864 | Blo-Chr10:27339437 | 3.58E-55 | dispersed | |
Blo04g00929 | Blo-Chr4:10990813 | Blo02g00141 | Blo-Chr2:1233511 | 3.61E-58 | transposed | |
Blo04g00929 | Blo-Chr4:10990813 | Blo15g00440 | Blo-Chr15:6493752 | 4.79E-58 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12325 | PF00808 | CBFD_NFYB_HMF | 1.20E-26 | CL0012 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g00929 | K08065 | - | csv:101214273 | 213.001 |