Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00930 ATGTGGGTCAGTGGGTGTTGGTGTGTGAACATTACAGAAGCTGCTTTGGGTTTCGGAGGGAGTAGTGGCAGAGATGAAAGCAGTGACCGGAGCTTTCGTTCTCTTCTGGTTGATCCTGCTGGTGCACCAAGTGCCTACTCAATCTTCCAGTTTAGACGAAAGCTAGGAGTTCCGAATAGTAAAATCCTTAAGTTGCTAGAAATTTCACAATGCCGTGCAGTTACTTTCATTTATTGTAGTTGTGGTATTCTGCAAATGGGTGATGCTTTGAGAAGCTTCAGGGCCAGCTTAGAGGATCCTGACAATGTCTTGCAGAGTTGGGATCCCACACTAGTAAACCCCTGTACGTGGTTTCACGTTTCATGCAATACTGAAAACAATGTTATAAGAGTTGATCTTGGAAATGCAGGATTATCTGGTAAATTGGTTCCTCAACTTGGACTGCTTAAAAGCTTGCAATACCTAGAACTCTATGGCAACAACATTAATGGAGAAATTCCAAATGAGCTTGGAAATCTTACAGACTTGGTGAGCTTGGATCTTTACATGAACAGTTTAACTGGTCCCATTCCAGGCACCTTGGGCAATCTCAAAAAATTGCGTTTCCTAGATTTATCAAACAACCGTTTATCAGGAGCAGTTCCAGATAATGGATCATTTTTGCTATTTACTCCGATCAGCTTTGCAAATAATTTGAATCTATGTGGCCAAGTAACTGGCAATCCTTGCCCTGGATCTCCACCATTTTCCCCACCGCCTCCGTTTGTTCCACTTTCAGTGCCTTCTTCTCCTGTTGTAAATACCCCCACTGGAGCAATTGCTGGAGGAGTGGCCGCAGGTGCTGCCCTACTATTTACTGCTCCGGCTGTTTGTTTTGCATATTGGTGGCGAAGGAAGTCAAAAGAACAATTCTTTGACATTCCTGCTGAAGAAGATTCAGAAGTTCAACTGGGACAGCTGAAAAGGTTTTCACTGCGGGACTTACAAGTTGCCACCGACAACTTTAGTAACAAAAACATTCTAGGAAGAGGTGGATTTGGCAAAGTATACAAGGGTCGGTTGGCTAATGGCTCATTGGTGGCCGTAAAACGGCTTAAAGAAGAACGCACACCAGGTGGAGAATTGCAGTTTCAAACTGAAGTAGAGATGATTAGCATGGCTGTTCATCGGAATCTCCTTCGACTACATGGGTTTTGTATGACCTCAAATGAAAGGCTACTTGTTTATCCATTCATGGCCAATGGAAGTGTAGCATCTTGCTTAAGAGAGCGACCGCAATCAGAGGCGCCGCTCGATTGGCCAAGAAGAAAGAAAGTCGCCCTAGGCTCTGCAAGGGGCCTATCTTATTTGCATGATCACTGTGATCCAAAGATCATTCATCGGGATGTTAAAGCTGCAAATATTTTGCTGGATGAGGAGTTTGAGGCGGTGGTTGGTGATTTTGGGTTGGCTAAGCTAATGGACTATAAAGATACTCATGTAACCACTGCCGTTCATGGGACGATTGGCCATATAGCCCCTGAATATCTTTCCACCGGAAAATCATCGGAAAAGACCGATGTTTTTGGGTATGGAATTATGCTTCTGGAATTAATAACTGGGCAGAGAGCTTTCGATCTTGCTCGGCTTGCAAACGATGAAGATGTTATGCTGCTCGATTGGGTGAAAGGACTTCTAAAAGAGAAAAAATTGGAGATGCTTGTGGATCCTGATCTACAGAATCAATATGATGAAATTGAAGTGGAGCAACTAATCCAAGTGGCCCTTCTCTGCACTCAAGGCTCACCGACGGAGCGGCCGAAGATGTTGGAGGTGGTTAGAATGCTCGAAGGTGATGGATTGAACGAAAGATGGGAAGAGTGGCAGAAAGTCGAGGTCGTTTACCATAACATTGAGATGGCATCCTCCGAAAATTCCGAGTGGATTGTCGATTCCTACGACAACCTCCATACTTTCGAACTGTCGGGACCCAGATAA 1977 44.46 MWVSGCWCVNITEAALGFGGSSGRDESSDRSFRSLLVDPAGAPSAYSIFQFRRKLGVPNSKILKLLEISQCRAVTFIYCSCGILQMGDALRSFRASLEDPDNVLQSWDPTLVNPCTWFHVSCNTENNVIRVDLGNAGLSGKLVPQLGLLKSLQYLELYGNNINGEIPNELGNLTDLVSLDLYMNSLTGPIPGTLGNLKKLRFLDLSNNRLSGAVPDNGSFLLFTPISFANNLNLCGQVTGNPCPGSPPFSPPPPFVPLSVPSSPVVNTPTGAIAGGVAAGAALLFTAPAVCFAYWWRRKSKEQFFDIPAEEDSEVQLGQLKRFSLRDLQVATDNFSNKNILGRGGFGKVYKGRLANGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLHGFCMTSNERLLVYPFMANGSVASCLRERPQSEAPLDWPRRKKVALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVHGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDEDVMLLDWVKGLLKEKKLEMLVDPDLQNQYDEIEVEQLIQVALLCTQGSPTERPKMLEVVRMLEGDGLNERWEEWQKVEVVYHNIEMASSENSEWIVDSYDNLHTFELSGPR 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10992539 10997032 + BLOR13842 Blo04g00930 59958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00930 658 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Blo04g00930 658 SUPERFAMILY L domain-like 86 221 - -
Blo04g00930 658 Gene3D Ribonuclease Inhibitor 85 245 IPR032675 -
Blo04g00930 658 Pfam Leucine rich repeat N-terminal domain 87 123 IPR013210 -
Blo04g00930 658 SUPERFAMILY Protein kinase-like (PK-like) 315 610 IPR011009 -
Blo04g00930 658 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 203 658 - -
Blo04g00930 658 Gene3D Phosphorylase Kinase; domain 1 304 411 - -
Blo04g00930 658 Pfam Protein tyrosine and serine/threonine kinase 338 609 IPR001245 GO:0004672|GO:0006468
Blo04g00930 658 Gene3D Transferase(Phosphotransferase) domain 1 412 629 - -
Blo04g00930 658 ProSiteProfiles Protein kinase domain profile. 335 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00930 658 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 86 205 - -
Blo04g00930 658 SMART serkin_6 335 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g00930 658 PANTHER - 203 658 - -
Blo04g00930 658 PANTHER - 86 205 - -
Blo04g00930 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00930 Blo-Chr4:10992539 Blo15g00781 Blo-Chr15:26671223 0 dispersed
Blo04g00930 Blo-Chr4:10992539 Blo01g00391 Blo-Chr1:4427087 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84254 PF00069 Pkinase 1.80E-43 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00930 K13418 - csin:114301400 894.804