Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00933 ATGGATATATATGAACCAATGCACCACATTGACATGTGGGGAGAAAACTTCAAGTATAATGTCAATCTAAGTACCCCTCCAACAATGATCATGGAAGCCGACACAAAATTAGATAATCAGTCGGATGATGCTTCGCTTGGATCACTTGGACATCCTAACCATTATGAGAACCATGCAACAACTAAGCCTGTTGACAAGGTAAAAAGACGCCTTGCACAAAATCGTGAGGCAGCTCGTAAAAGCCGTTTGCGGAAAAAGGCTTATATTCAGCAGTTAGAAACAAGTCGATCGAAGCTGATTCAATTGGAGCAGGAGATTGATAAAGCGAGACAACAAGGTCTCTATGTTGGTTGCAGACTTGATGCCAATCAGTTGAGTTTCTCTGGACCTGTAAATTCAGGTGTCTCGACATTTGAGCTGGAGTACGGACATTGGGTGGAAGAGCAAAATAGGCAGATATGCGAATTTAGGAATGCCCTTCATACAGATATAACTGATTTAGAGCTACGAATTATGGTGGAAAACGGGATGAGACATTATTTTTATCTATCTCGGATGAAAGCAAGAGCGGCAAAGGCTGATGTCTTTTATGTAATGCATGGGATGTGGAAAACTTCGACTGAACGGCTTTTCTTGTGGATTGGAGGCTCTCGCCCTTCGGAGCTACTCGAGGTACTTGCGCCTCAGCTCGATACTTTGACCAAACAGCAACTTGTTGATGTTAACAATCTTCAGAGGTCTTGCAAGCAGGCAGAAGAAGCTCTTCTGCAAGGCATGGAAAAACTCCGTCTGGCTCTTATCGATGTAGTGGCTTGCCAAGTGGCTAAGATGGAAACTGCAATGGAGAGGCTAGAAGATCTAGTCAGCTTTGTTAACCAGGCCGATCATCTTCGGCAAGAAACACTACAGCAAATGTACAAAATCCTGACGACCCGCCAATCTGTTCACGGGCTGCTTGTGTTGGGAGAATATTTCCAACGGCTTCGAGAATTGAGTTCACTTTGGTCCAATCGTCCGCATTATGAATCCGCCTAG 1035 44.25 MDIYEPMHHIDMWGENFKYNVNLSTPPTMIMEADTKLDNQSDDASLGSLGHPNHYENHATTKPVDKVKRRLAQNREAARKSRLRKKAYIQQLETSRSKLIQLEQEIDKARQQGLYVGCRLDANQLSFSGPVNSGVSTFELEYGHWVEEQNRQICEFRNALHTDITDLELRIMVENGMRHYFYLSRMKARAAKADVFYVMHGMWKTSTERLFLWIGGSRPSELLEVLAPQLDTLTKQQLVDVNNLQRSCKQAEEALLQGMEKLRLALIDVVACQVAKMETAMERLEDLVSFVNQADHLRQETLQQMYKILTTRQSVHGLLVLGEYFQRLRELSSLWSNRPHYESA 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11047633 11049580 - BLOR13845 Blo04g00933 59961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00933 344 Pfam Seed dormancy control 152 227 IPR025422 GO:0006351|GO:0043565
Blo04g00933 344 ProSiteProfiles DOG1 domain profile. 135 338 IPR025422 GO:0006351|GO:0043565
Blo04g00933 344 PANTHER TRANSCRIPTION FACTOR TGA9 1 340 - -
Blo04g00933 344 Gene3D - 65 114 - -
Blo04g00933 344 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 64 108 IPR004827 GO:0003700|GO:0006355
Blo04g00933 344 SUPERFAMILY Leucine zipper domain 66 104 IPR046347 GO:0003700|GO:0006355
Blo04g00933 344 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 69 84 IPR004827 GO:0003700|GO:0006355
Blo04g00933 344 Coils Coil 267 294 - -
Blo04g00933 344 Coils Coil 241 261 - -
Blo04g00933 344 PANTHER TRANSCRIPTION FACTOR TGA1 1 340 - -
Blo04g00933 344 SMART brlzneu 62 122 IPR004827 GO:0003700|GO:0006355
Blo04g00933 344 Coils Coil 85 112 - -
Blo04g00933 344 Pfam bZIP transcription factor 65 99 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00933 Blo-Chr4:11047633 Blo18g00208 Blo-Chr18:2044278 6.91E-96 dispersed
Blo16g00033 Blo-Chr16:1730888 Blo04g00933 Blo-Chr4:11047633 6.33E-117 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12326 PF14144 DOG1 3.20E-24 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00933 K14431 - csv:101208419 470.7