Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00952 ATGTTTGAGGCGTTACCAACCAGTACCCTCTTCGTTACTCCATCATTAAAATATTTGGGTAAGTTGCATGTTATTCCTAACTTATCAAGAGTTTTGCCAGAAATAACCTTTGCCAATCTCCGTATGACATTTCCTTCACAGATTCTCTCCTTCAAGCTTCTCACCACTTTTGTTCTTTCCATCATCAATCTCATTGGGGAAATTCCTCCGGTGGTTAGTAACTTTTCTATGTTGATTGCCTTGGACCTCAGTTTCAATTCTCTCACTAGGAAAATCCCGATTGAAATTTGTAGGCTGTTGAATCTGCAGTTCTTAGCGTTGAATTCTAATTCTTTCAATGGCAAAATTTTGGCTGATATCGGAAACTGTTCAACACTACAACAACTCAAACTGTATGATAACCTGCCCTTCGGCAAGATTCTTGTTGAACTTGGTCAGTTATGGAGCTTGGAAATATTCCGAGCAGGAGGGAGTGTAGGAATTAACAGCGAAATTCCAGTAGAGATATCGAACTGTGAATCACTTGCCTTATTGGGTTTTGCAAACACTGTGATTTCGCAGAATATTCCGGCTAGTTTGGGAGAGCTTCAAGAAGCTCAAAACTCTCTCAGTGTACACAGCCAATTTGTCAGAAAATCGTCCCCTCCTCCAACCTTTGCCAAAGTTCAGAAAATATTTGCAATGGGTCCTCCATCGAAGGAAGCAGTTCTAGGGCCTGCTTCACAGATAAAATTGCATCTGGTATGTCTTCAATTTGGTTTTGTGCAATGTGTCGAATTTACACTTAGTAATCTGAGGGTCGTGCTTAAACTGATCATTGCAGCCAGTGAACATGATGGAGGAGTTCATGAGATTGGCTTGTGGAAATATGAAGAAAAATGGCAGACATATGGTATTCTTGCCAGTACTAGGAATGACGATGTCTTCACAATAACAACCCTCATCATTCCAAAGCAAAAGGCAACATCAAACTTAGTACACGCACGAGAAAATGATGAGCATATCAAGGAGCAGTTGATGAAGGATTTGCACGGGCGAGACTTATGGCTGTTTGAGAATTCATGTGAAATTGGTGTATTTTCTAAGCTCACAAATGCTTATTGTTTGGTTGCTATTGGTGGCTCGGAGAACTTCTACAGTACTTTTGAAGCTGAATTAGCAGATGTGATTCCTGTTGTTAAGACCTCTATTGGAGGCACTCGTATTATCGGTCGTCTTTGTGCTGGTAATAAAAATGGGCTTCTTGTGCCCCATACAACCACCGATCAAGAGCTTCAGCATTTGAGGAACAGTTTACCTGATCAAGTAGTCGTTCAGCGTATAGATGAGAGGCTATCAGCTCTGGGAAATTGTATTGCATGCAATGACCATGTTGCTCTGACACACATTGACCTTGACAAGGAAACTGAAGAAATGATTGCTGATGTTCTTGGAGTGGAAGTGTTTAGGCAGAGCGTAGCTGGTAATATCCTTGTGGGAAGTTACTGTGTCTTCTCAAACAGAGGTGGCCTTGTTCATCCCCAAACCTCAATTGAAGATCTGGACGAACTCTCAACGCTTCTTCAGGTCCCCTTGGTGGCCGGCACCGTCAACCGTGGCAGTGATGTGATTGGTGCTGGCATGACCGTAAATGATTGGACTGCATTTTGTGGATCCGACACTACGGCAACAGAGCTGTCTGTCATCGAGAGCGTTTTCAAGTTGAGAGAAGCCCAACCAAATGCCATAGCCGATGAAATGAGAAAATCGCTCATAGACAGCTATGTTTAA 1770 42.43 MFEALPTSTLFVTPSLKYLGKLHVIPNLSRVLPEITFANLRMTFPSQILSFKLLTTFVLSIINLIGEIPPVVSNFSMLIALDLSFNSLTRKIPIEICRLLNLQFLALNSNSFNGKILADIGNCSTLQQLKLYDNLPFGKILVELGQLWSLEIFRAGGSVGINSEIPVEISNCESLALLGFANTVISQNIPASLGELQEAQNSLSVHSQFVRKSSPPPTFAKVQKIFAMGPPSKEAVLGPASQIKLHLVCLQFGFVQCVEFTLSNLRVVLKLIIAASEHDGGVHEIGLWKYEEKWQTYGILASTRNDDVFTITTLIIPKQKATSNLVHARENDEHIKEQLMKDLHGRDLWLFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFEAELADVIPVVKTSIGGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDHVALTHIDLDKETEEMIADVLGVEVFRQSVAGNILVGSYCVFSNRGGLVHPQTSIEDLDELSTLLQVPLVAGTVNRGSDVIGAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIADEMRKSLIDSYV 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11576432 11595934 + BLOR13864 Blo04g00952 59980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00952 589 SUPERFAMILY Pentein 351 568 - -
Blo04g00952 589 SUPERFAMILY L domain-like 35 206 - -
Blo04g00952 589 TIGRFAM eIF-6: putative translation initiation factor eIF-6 351 568 IPR002769 GO:0042256|GO:0043022
Blo04g00952 589 Gene3D Ribonuclease Inhibitor 2 237 IPR032675 -
Blo04g00952 589 CDD IF6 351 567 IPR002769 GO:0042256|GO:0043022
Blo04g00952 589 Hamap Translation initiation factor 6 [eif6]. 331 589 IPR002769 GO:0042256|GO:0043022
Blo04g00952 589 SMART eIF6neu2 347 548 IPR002769 GO:0042256|GO:0043022
Blo04g00952 589 Pfam eIF-6 family 351 547 IPR002769 GO:0042256|GO:0043022
Blo04g00952 589 Gene3D - 349 569 - -
Blo04g00952 589 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 351 589 - -
Blo04g00952 589 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 351 589 IPR002769 GO:0042256|GO:0043022
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00952 Blo16g00540 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00952 Blo-Chr4:11576432 Blo12g01106 Blo-Chr12:28748004 5.72E-07 dispersed
Blo10g00619 Blo-Chr10:19099353 Blo04g00952 Blo-Chr4:11576432 8.93E-10 transposed
Blo11g00924 Blo-Chr11:19448419 Blo04g00952 Blo-Chr4:11576432 3.27E-07 transposed
Blo16g00583 Blo-Chr16:24057661 Blo04g00952 Blo-Chr4:11576432 2.00E-06 transposed
Blo16g00540 Blo-Chr16:22268824 Blo04g00952 Blo-Chr4:11576432 1.67E-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00952 K03264 - ming:122066887 454.907