Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00970 ATGCTGGAAATTCCAAGTATACCGGGAAATCTAGACGTGTCAACGGAGAATGGGGAAGACGGTGCGTTTGGCGAGGATGAGAAAATCGGAATCGGAAACCGGTGGCCTCGCCAAGAGACTTTGGTTTTATTGAAGATAAGGTCGGAAATGGATTCGGCTTTTCGAGACGCCAATCTTAAATTTCCGCTATGGGAAGAAGTTTCCAGGAAACTATTGGAACTAGGATTTCATAGGAGTGCTAAGAAATGCAAGGAGAAGTTTGAAAACATCTACAAGTACCACAGAAGAACCAAGGAAGGTCGATCAGGCCGGCAGAATGGAAAGACCTATCGGTTTTTTGAGCAATTAGAAGCTCTAGACACCCCTTCGATGCATCCATACCCTCCTCCGGCAGAAAAAATTCAAACTCCAGTTTCAGAAATCCCACGGATAAGCAACACTAATGTCGTCCACAACGCAATTCCGTGTTCTATGATAAACCCAAATTCAAATTTCATCTACTCGTCGAGTTCAACTCCGACGACATCAAGTTCAAGCAAGGAGTCGGAAGGAAGGCAAAAGAAGAAGAGAAAGTTTGGGGAGTACTTTGAGAAGCTGATGAAGGAAGTGATCGAAAAGCAAGAGAATTTGCAGAGGAAGTTCTTAGAAGTTTTGGACAAATGTGAACAAGAAAGGATAGCTAGAGAAGAAGCATGGAAAGTGCAAGAACTGGCTCGGATAAAGAGAGAGAGGGAGCTTCTTGTCCAAGAGCGATCAATTGCGGCTGCAAAGGATGCAGCCGTGCTTGCTTTCCTACAAAAATACGCGGGCCAGTTGGGGCCGATTCAGTTGCCGGAAAACATAACTCCGGGGGAGAATGTCTCGGAGAAGCAAAATGATAGCAATGGCATAAAAGTTGTGGATAGTCAAGAAAATAGCAACGGCGGGAATTCAAACCATGTGAGCTCCTCTCGTTGGCCAAAAGACGAAGTGGAGGCCTTAATCCAGATTAGGAGTAACCTCGATATGCAGTGTGTTGAAAATGGACAGAAAGGCTCGCTCTGGGAAGAAATCTCATTGGCGATGAAGAAACTCGGGTACAGTAGGAATGCAAAGAGGTGTAAAGAGAAATGGGAGAATATAAACAAGTACTTCAAGAGGGTGAAAGAGAGCAATAAGAGGAGGCCCGAAGATTCGAAGACTTGTCCATATTTTCATCAGCTCGATGTGTTGTACAAAGAGAAGACAAAGAAGCTCGATAGCTCGGGAAACTCACGATATGAGTTGAAACCCGAGGAGCTCTTAATGCACATGGTGGACAGGGAAGAACCGCCCCACCAAATTGAATCTGCCGTGGACGACGGCGAAGGCAAAAAAGTCGATCAAAATCAACGAGATCAGGAAAATAACGACGATGAAGATGATGATGAAGGCGACGACTATCAGCTAGTAGCTCATGATAATCCGATGGAAGTAATGAGCTAA 1464 44.95 MLEIPSIPGNLDVSTENGEDGAFGEDEKIGIGNRWPRQETLVLLKIRSEMDSAFRDANLKFPLWEEVSRKLLELGFHRSAKKCKEKFENIYKYHRRTKEGRSGRQNGKTYRFFEQLEALDTPSMHPYPPPAEKIQTPVSEIPRISNTNVVHNAIPCSMINPNSNFIYSSSSTPTTSSSSKESEGRQKKKRKFGEYFEKLMKEVIEKQENLQRKFLEVLDKCEQERIAREEAWKVQELARIKRERELLVQERSIAAAKDAAVLAFLQKYAGQLGPIQLPENITPGENVSEKQNDSNGIKVVDSQENSNGGNSNHVSSSRWPKDEVEALIQIRSNLDMQCVENGQKGSLWEEISLAMKKLGYSRNAKRCKEKWENINKYFKRVKESNKRRPEDSKTCPYFHQLDVLYKEKTKKLDSSGNSRYELKPEELLMHMVDREEPPHQIESAVDDGEGKKVDQNQRDQENNDDEDDDEGDDYQLVAHDNPMEVMS 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12136378 12138176 + BLOR13882 Blo04g00970 59998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00970 487 MobiDBLite consensus disorder prediction 169 188 - -
Blo04g00970 487 PANTHER - 16 482 - -
Blo04g00970 487 CDD GT1 317 382 - -
Blo04g00970 487 ProSiteProfiles Myb-like domain profile. 311 375 IPR001005 -
Blo04g00970 487 MobiDBLite consensus disorder prediction 280 320 - -
Blo04g00970 487 ProSiteProfiles Myb-like domain profile. 33 91 IPR001005 -
Blo04g00970 487 MobiDBLite consensus disorder prediction 433 459 - -
Blo04g00970 487 CDD GT1 33 98 - -
Blo04g00970 487 Coils Coil 204 224 - -
Blo04g00970 487 Gene3D - 319 380 - -
Blo04g00970 487 Gene3D - 35 96 - -
Blo04g00970 487 Pfam Myb/SANT-like DNA-binding domain 33 119 IPR044822 -
Blo04g00970 487 Pfam Myb/SANT-like DNA-binding domain 317 403 IPR044822 -
Blo04g00970 487 MobiDBLite consensus disorder prediction 460 474 - -
Blo04g00970 487 MobiDBLite consensus disorder prediction 281 317 - -
Blo04g00970 487 SMART sant 31 93 IPR001005 -
Blo04g00970 487 SMART sant 315 377 IPR001005 -
Blo04g00970 487 MobiDBLite consensus disorder prediction 433 487 - -
Blo04g00970 487 MobiDBLite consensus disorder prediction 1 29 - -
Blo04g00970 487 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2-LIKE 16 482 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00970 Blo-Chr4:12136378 Blo12g00788 Blo-Chr12:26285447 1.69E-140 dispersed
Blo04g00970 Blo-Chr4:12136378 Blo12g00787 Blo-Chr12:26264497 5.73E-126 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12330 PF13837 Myb_DNA-bind_4 4.00E-21 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00970 - - csv:101215942 576.63