Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00973 ATGGAGAAATCCCCAGAAGAAGAACACCCACAGAAGGCTTTTGGTTGGGCTGCTAGAGACACTTCTGGTCTTCTCTCTCCCTTCCATTTTTCCAGAAGGGACAATGGAGATGATGACGTAACTGTGAAGGTTCTGTACTGTGGGGTTTGCCATTCTGACCTACACTGTGTTACGAATGAGTGGGGCTACACAAATTATCCTATTGTTCCTGGGCACGAAATCACGGGTATCGTGACAAAGCTCGGAAGCAACGTAAAGAAATTCAGCGTGGGTGACCGAGTTGGAGTCGGTGTGATAATAGGGTCGTGTAGGAGCTGCGACAAATGCAAAGACGACTTAGAAAACTACTGTCCTAAAGTGATATTCACATATAACTCGGTCTTCCATGATGGAACAAAAAACTATGGAGGCTATTCTGATATGATTGTGGTAGATCAGCATTTTGTTCTTCGATTTCCAGAAAATTTACCTCTTGATTCGGGAGCTCCTCTCCTGTGTGCTGGAGTTTCGATCTACAGCCCAATGAAATATTATGGAATGACAGAGGCAGGCAAGCATTTGGGTGTGGTCGGGCTGGGTGGTCTTGGCCATGTTGCTGTCAAAATTGGGAAGGCATTTGGCTTGAAAGTTACTGTCATTAGCACCTCCCCTTCCAAGGAAGATGAGGCCATTAGCAAGCTTGGAGCTGATTCTTTCCTTGTCTCCACTGATCCACTCAAAATAAAGGCAAGTTCATCTTTTCTGCAGAAAATTAGACTCTCAAACATGGATTTCATAATTGACACAGTGGCTGCTGTCCATCCCCTTGCTCCACTGCTTGGTTTGTTGAAGATTAATGGAAAGCTGATTACAGTGGGTCTGCCTATTCAGCCCCTTGAGCTCCCAGTCTTTCCCCTTGTGTTTGGAAGGAAGATGGTGGGGGGAAGTGACATTGGAGGAGTAAAAGAGACACAAGAGATGCTGGACTTCTGCGCTAAACACAACATTTTGTCAGACATCGAACTGATTCAGATCGACGAAATCAACACGGCATTTGAAAGGCTGGCCAAATCGGACGTCCGGTATCGATTTGTGATCGACGTGGCGAATTCCCTGACGAAGTAA 1104 45.83 MEKSPEEEHPQKAFGWAARDTSGLLSPFHFSRRDNGDDDVTVKVLYCGVCHSDLHCVTNEWGYTNYPIVPGHEITGIVTKLGSNVKKFSVGDRVGVGVIIGSCRSCDKCKDDLENYCPKVIFTYNSVFHDGTKNYGGYSDMIVVDQHFVLRFPENLPLDSGAPLLCAGVSIYSPMKYYGMTEAGKHLGVVGLGGLGHVAVKIGKAFGLKVTVISTSPSKEDEAISKLGADSFLVSTDPLKIKASSSFLQKIRLSNMDFIIDTVAAVHPLAPLLGLLKINGKLITVGLPIQPLELPVFPLVFGRKMVGGSDIGGVKETQEMLDFCAKHNILSDIELIQIDEINTAFERLAKSDVRYRFVIDVANSLTK 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12183123 12185395 + BLOR13885 Blo04g00973 60001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00973 367 CDD CAD1 14 360 - -
Blo04g00973 367 Pfam Zinc-binding dehydrogenase 194 325 IPR013149 -
Blo04g00973 367 SMART PKS_ER_names_mod 23 359 IPR020843 GO:0016491
Blo04g00973 367 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Blo04g00973 367 Gene3D - 16 361 - -
Blo04g00973 367 SUPERFAMILY GroES-like 9 199 IPR011032 -
Blo04g00973 367 Gene3D - 167 331 - -
Blo04g00973 367 PANTHER ALDEHYDE REDUCTASE 11 365 - -
Blo04g00973 367 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Blo04g00973 367 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 11 365 - -
Blo04g00973 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 329 IPR036291 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00973 Blo16g00516 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g00784 Blo-Chr3:32698964 Blo04g00973 Blo-Chr4:12183123 6.20E-41 dispersed
Blo04g00973 Blo-Chr4:12183123 Blo04g01119 Blo-Chr4:17892029 4.63E-169 dispersed
Blo07g00433 Blo-Chr7:8614372 Blo04g00973 Blo-Chr4:12183123 5.62E-17 transposed
Blo17g00729 Blo-Chr17:22228439 Blo04g00973 Blo-Chr4:12183123 1.48E-146 transposed
Blo16g00516 Blo-Chr16:21032742 Blo04g00973 Blo-Chr4:12183123 5.10E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00973 K00083 - dcr:108215375 598.971