Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo04g00979 | ATGTCCAACCATGGCTTGTTCGAGACCCAAGATGCGGCTACACACACGGCTTGCTTTTCTTTTCCTCCTAACGCAACGTTTTCTTCGATGGGTTTTCACCAATCTCTCAAACCCATACCTAATAATATTATATCTTCTTCTGAAACCCTAATTTCATCGGCCACACTTGATCTGATCAAGCATAGAGAAGAAGAAAACTCGTTTGGATTTGGAGGAGCAGAACTACTTCCCTTACGAAAATCAACTGCAAATCATTTCTGGGCATTTGGAGAGGTGGGTGAATGTTTAAACGGGAAAAGAAACGGAGACGAACATAATCTAGGTGTAAATTCGATGAAGATGAAGAAGATAAAGGTGAGGAGGAAGGTGAGAGAGCCTAGGTTTTGTTTCAAGACCATGAGCGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATACGGACAAAAAGTGGTAAAGAACACACAGCATCCCAGGAGCTACTACCGATGCACTCAGGACAACTGTCGGGTAAAAAAACGGGTGGAACGACTAGCCGAAGACCCGAGAATGGTGATCACAACGTACGAGGGGCGACACCCCCATTCTCCATCTCAAGAATTGGAAGATTCACAAGCTCCTTCTCATATGAACACTTTCTTGTGGTAG | 651 | 43.93 | MSNHGLFETQDAATHTACFSFPPNATFSSMGFHQSLKPIPNNIISSSETLISSATLDLIKHREEENSFGFGGAELLPLRKSTANHFWAFGEVGECLNGKRNGDEHNLGVNSMKMKKIKVRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHPHSPSQELEDSQAPSHMNTFLW | 216 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 12394390 | 12395958 | - | BLOR13891 | Blo04g00979 | 60007 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo04g00979 | 216 | MobiDBLite | consensus disorder prediction | 201 | 216 | - | - | |
Blo04g00979 | 216 | Gene3D | WRKY domain | 126 | 192 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Blo04g00979 | 216 | SUPERFAMILY | WRKY DNA-binding domain | 131 | 198 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Blo04g00979 | 216 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 34 | 210 | IPR044810 | GO:0003700 | |
Blo04g00979 | 216 | ProSiteProfiles | WRKY domain profile. | 134 | 199 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Blo04g00979 | 216 | MobiDBLite | consensus disorder prediction | 190 | 216 | - | - | |
Blo04g00979 | 216 | PANTHER | WRKY TRANSCRIPTION FACTOR 13-RELATED | 34 | 210 | - | - | |
Blo04g00979 | 216 | SMART | WRKY_cls | 139 | 198 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Blo04g00979 | 216 | Pfam | WRKY DNA -binding domain | 140 | 196 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo04g00979 | Blo16g00089 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo04g00979 | Blo-Chr4:12394390 | Blo07g00133 | Blo-Chr7:1815711 | 6.61E-32 | dispersed | |
Blo07g00034 | Blo-Chr7:592191 | Blo04g00979 | Blo-Chr4:12394390 | 3.16E-20 | transposed | |
Blo16g00504 | Blo-Chr16:20110622 | Blo04g00979 | Blo-Chr4:12394390 | 2.40E-25 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
12332 | PF03106 | WRKY | 7.50E-25 | CL0274 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo04g00979 | - | - | tcc:18611706 | 276.944 |