Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g00979 ATGTCCAACCATGGCTTGTTCGAGACCCAAGATGCGGCTACACACACGGCTTGCTTTTCTTTTCCTCCTAACGCAACGTTTTCTTCGATGGGTTTTCACCAATCTCTCAAACCCATACCTAATAATATTATATCTTCTTCTGAAACCCTAATTTCATCGGCCACACTTGATCTGATCAAGCATAGAGAAGAAGAAAACTCGTTTGGATTTGGAGGAGCAGAACTACTTCCCTTACGAAAATCAACTGCAAATCATTTCTGGGCATTTGGAGAGGTGGGTGAATGTTTAAACGGGAAAAGAAACGGAGACGAACATAATCTAGGTGTAAATTCGATGAAGATGAAGAAGATAAAGGTGAGGAGGAAGGTGAGAGAGCCTAGGTTTTGTTTCAAGACCATGAGCGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATACGGACAAAAAGTGGTAAAGAACACACAGCATCCCAGGAGCTACTACCGATGCACTCAGGACAACTGTCGGGTAAAAAAACGGGTGGAACGACTAGCCGAAGACCCGAGAATGGTGATCACAACGTACGAGGGGCGACACCCCCATTCTCCATCTCAAGAATTGGAAGATTCACAAGCTCCTTCTCATATGAACACTTTCTTGTGGTAG 651 43.93 MSNHGLFETQDAATHTACFSFPPNATFSSMGFHQSLKPIPNNIISSSETLISSATLDLIKHREEENSFGFGGAELLPLRKSTANHFWAFGEVGECLNGKRNGDEHNLGVNSMKMKKIKVRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHPHSPSQELEDSQAPSHMNTFLW 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12394390 12395958 - BLOR13891 Blo04g00979 60007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g00979 216 MobiDBLite consensus disorder prediction 201 216 - -
Blo04g00979 216 Gene3D WRKY domain 126 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo04g00979 216 SUPERFAMILY WRKY DNA-binding domain 131 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Blo04g00979 216 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 34 210 IPR044810 GO:0003700
Blo04g00979 216 ProSiteProfiles WRKY domain profile. 134 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo04g00979 216 MobiDBLite consensus disorder prediction 190 216 - -
Blo04g00979 216 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 34 210 - -
Blo04g00979 216 SMART WRKY_cls 139 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Blo04g00979 216 Pfam WRKY DNA -binding domain 140 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g00979 Blo16g00089 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00979 Blo-Chr4:12394390 Blo07g00133 Blo-Chr7:1815711 6.61E-32 dispersed
Blo07g00034 Blo-Chr7:592191 Blo04g00979 Blo-Chr4:12394390 3.16E-20 transposed
Blo16g00504 Blo-Chr16:20110622 Blo04g00979 Blo-Chr4:12394390 2.40E-25 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12332 PF03106 WRKY 7.50E-25 CL0274 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g00979 - - tcc:18611706 276.944