Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01009 ATGCACAGTGACCTTGCGACCTTTGTCGAAGTCGCTGTGGATGATAAACTCGCGACCTTCGTCGAGATCCTGGCACTTGACGACCTTGCGACCTTTGTCGAGCTCTGCATCACCAGACTAACAGACTTATTCCCTATTGTTATGCTCTGCTGTAGCATGAGCATCACTATCAAGGATTTGCATAATAACAGTATTTCGGGTAATCTACCTGATTACGTAGTCAACATGCCTAACTTACAAAATTTGAATCTCGCGGACAATAATTTCAATGGCTGTATACCAACTAATTGGGGTCACATTTTCAGTTTGAAGCATTTGGTTTTGAAAGGAAACCACTTATCTGGAACCATTCCTGGTTCACTCACAAATCTTACTGGATTGGTAGAACTGGATCTTTCGGACAATGGCTTAACAGGAAAAATCCCGGAGAAGCTTTTGTCAGTTCTGACGTTTAATTTTACAGGAACACGATTACTCTGCGGTTCTGGCCTTGAGAAACCATGTGTTTCTAGGACTCTTCATGCAGATAGAACAAAGAAATTGAAACTTAGTGTCACTGTGACTTCTGCTAGTTGTGGAGGATTCATCATGTTTTTAATTGGTGTACTTTTTGCGTACAGTTTTTGCTACATGCACAAAGTTAGAGAGGAGATGTTTGTTGATGTCGCAGGTGAAGATGATAGTAAATTTTCCTTTGGTCAAGTCAGGAGGTTTTCCTGGCGTGAACTCCAACTTGCTACTGATAACTACAGGGAGGCCAATGTTATCGGGCAAGGAGGCTTTGGTAAGGTGTATAAAGGTGTCCTCTCAAACAACACCAAGGTTGCCGTCAAACGCATGATTGACTTGCACAGTCCTGGTGGGGAGGCTGCTTTTCTGAGAGAAGTTCAAGTTATAAGCGTTGCCGTTCATAAAAATCTCCTCCGTTTGATGGGTTTTTGTACAACCTCAACTGAGAGAATCCTTGTTTATCCTTTCATGAAGAATCTCAGTGTTGCACACTGCTTGAGAGATTTGAAACCTGGGGAAAAAGGCTTGGACTGGCCAGCTAGGAAACGAATAGCATTTGGTGCAGCCCATGGTTTGGTGTATTTACATGAGGATTGCAATCCTAAAATCATCCATCGCGATCTAAAAGCTGCAAATATCCTGTTAGATGATGACTTTGAAGCTGTACTTGGAGATTTTGGGCTAGCAAAGCTAGTGGATACAAATTTGACGCATATTACAACTAAAGTGCGAGGTACAATGGGGCACATCGCTCCTGAATACTTGTCCACTGGTAAATCATCAGAAAAGACTGATGTATTTGGATATGGTATAACACTTCTCGAACTTGTGACTGGCCAACGCGCAATTAATCTTTCACGTCTTGAAGAGGAGGAGGACGTTCTTTTGCTTGATCATGACTCAAAAAACATTGGTAGAGTCATTGAATTTCCAGCATCTCACGTCTTTAAATCAGGATTACTGAAGCCAGGGACATATAAATGTGGAACCGTTTACAATCAGGGAGACAAATTTCTGGATCATGCTGTACATTTAAGAATGAAGAAGTTGCAAAAAGAAAAGCGGCTCAATGACGTAGTCGATAAAAACTTGGAGAGCTACGATGCCGAAGAAGTGGAAACTATGATCCAAGTTGCCTTTCTCTGCACACATAGTTTGCCCGAGTGCCGGCCTGCGATGAGAGAAGTGGTGAGTCTTTTGAAAGGAGTCAACCTGGCAGAAAGATGGGGAGAGTGGATGGTTGTTGAAGAGATGAGGGATCGGCAGGGGGGGTGCAATGGAATAGGTGCGGGGGTTTTCCATTCTGTTCTCAGCTCCGCCATTCTTTTACTGTTCTTCAACTTCTATCTTAAGATTCAGGTTCAGCCTTTGTCTCCAATGGCGGCGGATAATCTGAACAGTGAGGATCTTTCTGTTGCGTTTGCAAGAAAATGTATATGA 1950 42.87 MHSDLATFVEVAVDDKLATFVEILALDDLATFVELCITRLTDLFPIVMLCCSMSITIKDLHNNSISGNLPDYVVNMPNLQNLNLADNNFNGCIPTNWGHIFSLKHLVLKGNHLSGTIPGSLTNLTGLVELDLSDNGLTGKIPEKLLSVLTFNFTGTRLLCGSGLEKPCVSRTLHADRTKKLKLSVTVTSASCGGFIMFLIGVLFAYSFCYMHKVREEMFVDVAGEDDSKFSFGQVRRFSWRELQLATDNYREANVIGQGGFGKVYKGVLSNNTKVAVKRMIDLHSPGGEAAFLREVQVISVAVHKNLLRLMGFCTTSTERILVYPFMKNLSVAHCLRDLKPGEKGLDWPARKRIAFGAAHGLVYLHEDCNPKIIHRDLKAANILLDDDFEAVLGDFGLAKLVDTNLTHITTKVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAINLSRLEEEEDVLLLDHDSKNIGRVIEFPASHVFKSGLLKPGTYKCGTVYNQGDKFLDHAVHLRMKKLQKEKRLNDVVDKNLESYDAEEVETMIQVAFLCTHSLPECRPAMREVVSLLKGVNLAERWGEWMVVEEMRDRQGGCNGIGAGVFHSVLSSAILLLFFNFYLKIQVQPLSPMAADNLNSEDLSVAFARKCI 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13180600 13198001 + BLOR13921 Blo04g01009 60037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01009 649 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 49 471 - -
Blo04g01009 649 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 517 593 - -
Blo04g01009 649 ProSitePatterns Protein kinases ATP-binding region signature. 256 278 IPR017441 GO:0005524
Blo04g01009 649 PANTHER LRR RECEPTOR-LIKE KINASE 517 593 - -
Blo04g01009 649 Gene3D Ribonuclease Inhibitor 24 170 IPR032675 -
Blo04g01009 649 SUPERFAMILY Protein kinase-like (PK-like) 229 570 IPR011009 -
Blo04g01009 649 Gene3D Phosphorylase Kinase; domain 1 219 326 - -
Blo04g01009 649 Pfam Protein kinase domain 250 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g01009 649 Pfam Leucine rich repeat 77 137 IPR001611 GO:0005515
Blo04g01009 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672|GO:0006468
Blo04g01009 649 SMART serkin_6 250 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g01009 649 SUPERFAMILY L domain-like 49 150 - -
Blo04g01009 649 ProSiteProfiles Protein kinase domain profile. 250 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g01009 649 PANTHER LRR RECEPTOR-LIKE KINASE 49 471 - -
Blo04g01009 649 Gene3D Transferase(Phosphotransferase) domain 1 327 589 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00448 Blo-Chr2:6145566 Blo04g01009 Blo-Chr4:13180600 0 dispersed
Blo04g01009 Blo-Chr4:13180600 Blo15g00781 Blo-Chr15:26671223 4.70E-11 dispersed
Blo04g01009 Blo-Chr4:13180600 Blo07g00115 Blo-Chr7:1588834 6.83E-149 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84261 PF00069 Pkinase 1.40E-40 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01009 - - jre:108996276 702.59