Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01016 ATGTCCCAAGATTATCACCAACACCGAAGCTTCTTCGGTTTCTCTAATGGGTTCGAGAAATCAGCAGCATCGGCGACACACCACCAAGAACGGCAGATCCGGCGAGATAATGGCGGATTAGTCGGCGTAGAAGAAGAAGAGCCAGGCGGCTTACACGTGTATGAGACTGCCGGAATGTTATCAGAATTCTTCAATTTCCATCCGGTCACCACAGCCGCTGCGGAATTACTAGAACCACAGATGATAATGGCAAATTCCCGGCAACCAAGTCTGCAGCCGCCATCAACCGGTCTGACCACCGACTGGTATGGAGAGAGATCAATACCGTTGGGGGATTCGAAGACCCATTCTATCATAACTCACACCCACCATAATCCGATTACTGCCATTAATGCAGACTCAGCCACTGCCATGCAGCTTTTTCTGATGAATCCGCAGCCGAGATCGTCGCCTTCAACTCATCCCCTTCCATCAACTTCCTCTACCCTCCACATCCTTCAAGGTTTCACTTCTTCTGATGCTCCAACAGAAGCAACTTCTGGTCAATTCTCATGGCTTCCTGATGGCAATCATGGCGGAACAGCTCGATCTTCTTCACATGGCCTTTCTTTATCCTTGTCGTCTTCTTTGCAGCAACTAGAAGCATCAAAGGCTGACGATTTCAGAATGGGAGATACTGGTAACTTACTGTATTACAATCACGGTGGAAGTGGAAGTGGTCCGACCCAGGAAGTTCATGTTGGGTTTGGGTCATCGTTATCCATCGTCAATGTCCTGAGGAATTCAAAGTACGCAAGGGCTACACATGAATTGCTCGAAGAATTTTGCAGCGTCGGTAGAGGTCAGTTTAAGAAGAGCAAATTAGGTCGGAATAACTCCGACGTTAGCTCAAATCCGGCAATTTCCGGTGCCGTCGGCTCTTCATCTTCTTCAAAGGACCTTCCTCCATTGTCGGCTTCCGATAGGATTGAACATCAAAGAAGAAAGGTGGATAGACGATACAGCCAATACTGCGGACAAATGCAAATGATGGTCAATTCGTTTGATTTGGTGATGGGGTTTGGGGCTGCAGCCCCATACACAATGCTAGCGCAGAAGGCAATGTCACGCCACTTCCGTTGTCTGAAAGACGGGATAACTGCGCAGTTGAAGCACAGCTGCGATTTGCTGGGGGACAAAGACGGCGGGAGAGGGTCGGGAATCACGAAGGGGGAGACTCCGAGACTGAAAATGGTCGAGCAAAGCTTAAGGCAGCAAAGAGCTTTTCACCAAATTGGTATGATCGAACAAGAGGCTTGGCGGCCTCAACGTGGCTTGCCTGAACGTTCTGTCAACATTTTGAGATCATGGCTTTTTGAGCATTTTCTTCACCCGTATCCAAGTGACGCAGATAAGCATCTATTGGCAAGACAGACTGGTTTATCAAGAAATCAGGTTTCAAACTGGTTCATCAATGCCAGGGTTAGATTGTGGAAACCAATGGTGGAAGATATGTATCAGCAAGAAGCCAAAGAAGCAGATGAAGATGGTGAGGACCACGAAGAAGAGGAGGAAGAAGAAGAAGAAGTTGGGAAAGAAAGAGAAGAAATTATGAAGAAAAATAATGGAGTAACACAAACTACAATGCCAACAGGCAAAAGATCCCACGTTAATGCCTCAGAAAAGGACCCTTCAATCAACACTCAGCCCTTCTCGGAAAACCAAGCATCGCAACCCATCACCACCGCGGTTGCCGGGGCAGTGGAGCCGCCGTGTTTTCCTGCGACGATTGATCTGCACGACCCGTATCGGCTCAGAAGCATCGTGGCAGCTGATTATGGGATCAGCTCTGAAAATGCTGACGTTATAGGGACAACCCTTGTAAGATATGGGACCATGACCGGTGATGTTTCACTCACTTTAGGTCTCCGCCATGCCGGTAACATGCCGGATAAAAGCTCTCCTTTTAGTATTACAGATTTTGGGGGACGTTAG 1974 48.07 MSQDYHQHRSFFGFSNGFEKSAASATHHQERQIRRDNGGLVGVEEEEPGGLHVYETAGMLSEFFNFHPVTTAAAELLEPQMIMANSRQPSLQPPSTGLTTDWYGERSIPLGDSKTHSIITHTHHNPITAINADSATAMQLFLMNPQPRSSPSTHPLPSTSSTLHILQGFTSSDAPTEATSGQFSWLPDGNHGGTARSSSHGLSLSLSSSLQQLEASKADDFRMGDTGNLLYYNHGGSGSGPTQEVHVGFGSSLSIVNVLRNSKYARATHELLEEFCSVGRGQFKKSKLGRNNSDVSSNPAISGAVGSSSSSKDLPPLSASDRIEHQRRKVDRRYSQYCGQMQMMVNSFDLVMGFGAAAPYTMLAQKAMSRHFRCLKDGITAQLKHSCDLLGDKDGGRGSGITKGETPRLKMVEQSLRQQRAFHQIGMIEQEAWRPQRGLPERSVNILRSWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQEAKEADEDGEDHEEEEEEEEEVGKEREEIMKKNNGVTQTTMPTGKRSHVNASEKDPSINTQPFSENQASQPITTAVAGAVEPPCFPATIDLHDPYRLRSIVAADYGISSENADVIGTTLVRYGTMTGDVSLTLGLRHAGNMPDKSSPFSITDFGGR 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13443518 13447584 + BLOR13928 Blo04g01016 60044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01016 657 MobiDBLite consensus disorder prediction 285 328 - -
Blo04g01016 657 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 40 644 - -
Blo04g01016 657 Coils Coil 496 533 - -
Blo04g01016 657 CDD homeodomain 433 494 IPR001356 GO:0003677
Blo04g01016 657 MobiDBLite consensus disorder prediction 172 201 - -
Blo04g01016 657 Gene3D - 436 498 - -
Blo04g01016 657 MobiDBLite consensus disorder prediction 286 316 - -
Blo04g01016 657 ProSiteProfiles 'Homeobox' domain profile. 430 493 IPR001356 GO:0003677
Blo04g01016 657 SMART HOX_1 433 497 IPR001356 GO:0003677
Blo04g01016 657 MobiDBLite consensus disorder prediction 502 524 - -
Blo04g01016 657 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 40 644 - -
Blo04g01016 657 MobiDBLite consensus disorder prediction 534 566 - -
Blo04g01016 657 SMART prehox3 253 381 IPR006563 -
Blo04g01016 657 MobiDBLite consensus disorder prediction 502 566 - -
Blo04g01016 657 MobiDBLite consensus disorder prediction 24 41 - -
Blo04g01016 657 Pfam Homeobox KN domain 450 489 IPR008422 GO:0003677|GO:0006355
Blo04g01016 657 Pfam Associated with HOX 258 380 IPR006563 -
Blo04g01016 657 SUPERFAMILY Homeodomain-like 434 500 IPR009057 -
Blo04g01016 657 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01016 Blo-Chr4:13443518 Blo05g00608 Blo-Chr5:16317913 0 dispersed
Blo04g01016 Blo-Chr4:13443518 Blo12g00539 Blo-Chr12:23334895 1.02E-73 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12335 PF07526 POX 2.60E-35 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01016 - - vvi:100261554 691.419