Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01032 ATGAATTCCTTCTGGGTAATCGGAGTTTCAGGGTTCATCATCCTCATCGGAGCTTTACTATTTCTGAAATGCCGATTAAGCAGAGAAAAATCAGCATCCGAACAAGAAGAAACGCTTTCTTCATCTTTCTTCTCCTACGACATAAAAAGCTTCCACTGCATAAGCTTCGACCACCGGGAAATAATCGAATCCATGGTCCCAAAAAACATCGTCAGCCATGGTGGATCAGGAACAGTGTACAAAATCGAACTAAGCAGCAGAGAGGTGGTCGCAGTGAAGAGACTTTACAGCCAAAAGACAAAAGATGAGCTAATACTAGACAAAGAATCAAAAACAGAGGTTGAAACTCTGGGGAGTATAAGGCACAAAAACATAGTGAAATTATACTGCTATTTATCGAGCTTAGATTGCAGGCTTCTGGTTTACGAGTACATGAAGAATGAAAATCTCTATGACGCCTTACACAAAGGGTGGGTACATTTGGATTGGGCGATTCGCCTTCGTGGATTTCGTCTTTGGGAGAGAAATAACGGCTTTTTTATTTTTGAAAGTGGACTTTTTCTCCAAAGTGAGCTCGAGAAAGCTAAGGAAGAGGACGGTGAGTCAGCTGGAGATGGAGATGAAAAGGAGGAGGAAGACGGCGAGGATGAAGATGAAGATGATGAAGAAGACGACAAAGTCAAGAAACGAGGTGGTTTTAGCAAATTATGCGGCCTTTCACCACAACTGGAGGAATTCACCGCGGTGTCTGAAATGGCAAGCACAGAATTCAGAAGAACCGGAAAGAGAGAAAAAAGGGCAGTTCAAATTTCAGACGCTCTGATCGGTGCTGGGGAAAGTGCATTATCACGAGTGAATCGAATGCGGGAATACATAAAGGAAAACGACCTCCAGTTTACAAAAGATGGTAATCTGTTGAATTGGAATAAGAGGCATTCTCATACCATTTCCTGTTTTTAA 960 42.29 MNSFWVIGVSGFIILIGALLFLKCRLSREKSASEQEETLSSSFFSYDIKSFHCISFDHREIIESMVPKNIVSHGGSGTVYKIELSSREVVAVKRLYSQKTKDELILDKESKTEVETLGSIRHKNIVKLYCYLSSLDCRLLVYEYMKNENLYDALHKGWVHLDWAIRLRGFRLWERNNGFFIFESGLFLQSELEKAKEEDGESAGDGDEKEEEDGEDEDEDDEEDDKVKKRGGFSKLCGLSPQLEEFTAVSEMASTEFRRTGKREKRAVQISDALIGAGESALSRVNRMREYIKENDLQFTKDGNLLNWNKRHSHTISCF 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13956494 13961288 + BLOR13944 Blo04g01032 60060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01032 319 MobiDBLite consensus disorder prediction 197 228 - -
Blo04g01032 319 Pfam Protein kinase domain 71 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g01032 319 ProSiteProfiles Protein kinase domain profile. 65 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g01032 319 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR1 1 168 - -
Blo04g01032 319 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 168 - -
Blo04g01032 319 SUPERFAMILY Protein kinase-like (PK-like) 50 168 IPR011009 -
Blo04g01032 319 Gene3D Phosphorylase Kinase; domain 1 49 144 - -
Blo04g01032 319 SMART serkin_6 65 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo04g01032 319 MobiDBLite consensus disorder prediction 203 223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01032 Blo-Chr4:13956494 Blo12g00744 Blo-Chr12:25789459 7.63E-23 dispersed
Blo16g00414 Blo-Chr16:16089647 Blo04g01032 Blo-Chr4:13956494 9.13E-09 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84264 PF00069 Pkinase 1.80E-11 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01032 - - csv:101222864 258.455