Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01033 ATGTCATCGTCGAATTCTCCGTGCGCGGCCTGCAAGGTACGGAGGTGTAAATGCACGCAAGAGTGTGTATTCGCGCCGTATTTTCCACCAGATCAGCCTCAGAAATTTGCAAATGTCCACAACGTGTTCGGCGCAAGCAACGTGGCCAAGCTGCTCAACGAACTCGACGCTAGGCACCGTGAAGACGCAGTTAACTCTCTGGCTTACGAGGCCGAGTTTCGCCTCCGAGACCCAGTGTATGGATGCGTCGGTCTGATCTCCCTCCTTCAGCACAGACTGAAGCAAATGCAAAGCGATCTCCTCAACGCCAAAAAAGAGCTCGCCAGCTACATTGGACCTCAGGCAATGCTTCCTGTAATGCAACCTTCAGCGATGATGTTGGTGCAACAACAACAACATCCAGGCAATCCTTCGTCTTCCTCCATTATGCCTTATAACATGCCGCCCATGATGAGTATCCCGACTGGTCCTTCCGGGCAAATGATGATTCATGAGCCTCACCAACAACAGCAGCAGCAACACCAGCTTCATCAGCAACAGTTTTTTGAGGCTCAGCAATTGGCCGCAACCGTAGCGGCAAGAGAGCAGCAAGATATGTTTAGAGCTTTCGAGCCAAAAGAACAACAAATGGACCCCCGCCATCATCATCCTCAACAGCAGCAGCAAGAGCTTTTACGGTTACATAATGGGTTCGACCCATCTCCGGTATCTGCCAGTGGATTGAATCAGCTTAACAACGCTTCTGCTTTGTCACCTTCCTTGGCTCTGGGCACCTTCGATAGTGCTTACCACCTTCAACCAGAGATTTCAGAACATCCTCACTCCCATTATCATCATCAGCAGCAGCAGCAGCAGCAGCTTCAGGCTCAGCTTTTGCTCCAACCGCAGCAGCAGCCACAACCACCTACTGAATCCCAGCTTCTGCAGCAGCAAAAGGCAGATAGCGAGGACGACAGAATCATGGGTCCCTCTGGTTAG 978 51.43 MSSSNSPCAACKVRRCKCTQECVFAPYFPPDQPQKFANVHNVFGASNVAKLLNELDARHREDAVNSLAYEAEFRLRDPVYGCVGLISLLQHRLKQMQSDLLNAKKELASYIGPQAMLPVMQPSAMMLVQQQQHPGNPSSSSIMPYNMPPMMSIPTGPSGQMMIHEPHQQQQQQHQLHQQQFFEAQQLAATVAAREQQDMFRAFEPKEQQMDPRHHHPQQQQQELLRLHNGFDPSPVSASGLNQLNNASALSPSLALGTFDSAYHLQPEISEHPHSHYHHQQQQQQQLQAQLLLQPQQQPQPPTESQLLQQQKADSEDDRIMGPSG 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13965454 13966431 - BLOR13945 Blo04g01033 60061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01033 325 MobiDBLite consensus disorder prediction 279 310 - -
Blo04g01033 325 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Blo04g01033 325 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Blo04g01033 325 PANTHER LOB DOMAIN-CONTAINING PROTEIN 36-LIKE 1 313 - -
Blo04g01033 325 Coils Coil 86 106 - -
Blo04g01033 325 MobiDBLite consensus disorder prediction 273 325 - -
Blo04g01033 325 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 313 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01033 Blo-Chr4:13965454 Blo17g00504 Blo-Chr17:7740135 3.08E-48 dispersed
Blo04g01033 Blo-Chr4:13965454 Blo18g00496 Blo-Chr18:6148715 7.17E-49 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12336 PF03195 LOB 1.20E-38 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01033 - - jre:109018950 354.755