Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo04g01073 ATGGTAGTTCTTCTTATTAAGGCTAAGAAAGAACCAGAGGGATACTCACTGATCAAGACCGAACAGACTTCGATTGATAGGAGAATTAACGGCGATATGCCACCCTTAGATTACGAACAACCGCTGATTCTTGGCGAAGGAGAAGAAGAAACAGCTTATGACTCGGGGCAGAAGGTTCTGGTGATCGGAGTCGGCGAAGAAGACGGCGATGCTTCTGCTGGAACACCGCCATTTTCGTGGAAAAAGCTATGGCTTTTTACCGGACCTGGGTTTTTGATGAGCATAGCGTTTCTCGATCCGGGGAATTTGGAAGGAGATCTTCAGGCGGGGGCGATTGCTGGGTATTCGCTTTTGTGGCTGCTCATGTGGGCTACGGCTATGGGGCTCTTGGTGCAGCTACTGGCTGCGAGACTCGGCGTGGCCACTGGCCGGCACTTGGCCGAGCTGTGTCGAGACGAGTACCCTAGATGGGCGAGTATGGTGCTATGGGTTATGGCGGAGTTGGCTCTTATAGGGGCTGATATACAGGAGGTTATTGGGAGTGCCATTGCTCTTAAGATTTTGAGTAATGGGATTTTACCTCTTTGGTCTGGTGTCATCATCACTGCTTTTGATTGCTTCATATTTCTGTTTCTCGAAAACTATGGTGTAAGGAAATTAGAAGCAGTTTTTGCCATCCTTATCGCTACAATGGCCGTGTCATTTGCATGGATGTTTGGCGAAACAAAGCCTAGTGGAACCGAGCTTCTTCTTGGTATTTTGATTCCAAAATTAAACTCAAGAACGATTCGCCAGGCAGTTGGAGTAGTGGGTTGTATAATCATGCCCCACAATGTATTTTTACACTCGGCCCTCGTTCAATCAAGAGAGGTCGACCCTCAAAAGAGAGGACGAGTTCAGGAAGCTCTCAAATACTACTCCATAGAGTCCACTGTCGCTCTTGTCCTCTCCTTCGTCATCAACCTCTTTGTCACAACAGTTTTTGCAAAAGGATTTTATAACACAGAAATAGCGAATAGTATTGGCCTTGTCAATGCAGGACAGTATCTTCAATCTAAGTATGGCGGTGGAATTGTCCCTATTTTGTATATTTGGGGTATTGGTTTACTTGCAGCTGGTCAAAGTAGCACCATTACAGGTACTTATGCTGGACAGTTCATAATGGGGGGGTTTTTGAATTTGAGGCTGCAAAAATGGCTTAGAGCCTTGATCACTCGAAGCTGTGCGATTGTGCCGACAATGGCGGTTGCACTCGTGTTCGACACGTCTGAGGATGCTTTGGATGTTCTTAATGAATGGCTGAATGTTCTTCAGTCTATTCAGATCCCTTTTGCTCTTATTCCTCTTCTCTATTTGGTCTCCAAGGAGCAGATTATGGGCACGTTTCGAATTGGCCGTTTTCTAAAGATGGTCTCTTGGCTAGTGGCTGCTTTAGTGATGGCCATTAATGGGTATCTTCTGGTGGACTTCTTCTCCTCTGAAGTAAATGGAGTTTTTTTCGGATCAGCAGTTTGCGCTTTCACGGCTGCATATGTCGCCTTCATCATGTATCTCATCTCGGGAAGTATTACAGTTTCATGGTGGAGGAACTCCCCGCCGGCCAAGACCTCCACTGTTTTGGGACACTAA 1629 46.41 MVVLLIKAKKEPEGYSLIKTEQTSIDRRINGDMPPLDYEQPLILGEGEEETAYDSGQKVLVIGVGEEDGDASAGTPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLVQLLAARLGVATGRHLAELCRDEYPRWASMVLWVMAELALIGADIQEVIGSAIALKILSNGILPLWSGVIITAFDCFIFLFLENYGVRKLEAVFAILIATMAVSFAWMFGETKPSGTELLLGILIPKLNSRTIRQAVGVVGCIIMPHNVFLHSALVQSREVDPQKRGRVQEALKYYSIESTVALVLSFVINLFVTTVFAKGFYNTEIANSIGLVNAGQYLQSKYGGGIVPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLQKWLRALITRSCAIVPTMAVALVFDTSEDALDVLNEWLNVLQSIQIPFALIPLLYLVSKEQIMGTFRIGRFLKMVSWLVAALVMAINGYLLVDFFSSEVNGVFFGSAVCAFTAAYVAFIMYLISGSITVSWWRNSPPAKTSTVLGH 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 15606691 15609255 + BLOR13985 Blo04g01073 60101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo04g01073 542 Pfam Natural resistance-associated macrophage protein 104 465 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo04g01073 542 PRINTS Natural resistance-associated macrophage protein signature 373 392 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo04g01073 542 PRINTS Natural resistance-associated macrophage protein signature 192 211 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo04g01073 542 PRINTS Natural resistance-associated macrophage protein signature 162 188 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo04g01073 542 PRINTS Natural resistance-associated macrophage protein signature 266 289 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo04g01073 542 PRINTS Natural resistance-associated macrophage protein signature 217 238 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo04g01073 542 PRINTS Natural resistance-associated macrophage protein signature 435 454 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo04g01073 542 PRINTS Natural resistance-associated macrophage protein signature 401 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo04g01073 542 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 81 459 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo04g01073 542 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 41 538 - -
Blo04g01073 542 Hamap Divalent metal cation transporter MntH [mntH]. 69 491 IPR001046 GO:0016020|GO:0030001|GO:0046873
Blo04g01073 542 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 41 538 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo04g01073 Blo16g00367 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01073 Blo-Chr4:15606691 Blo05g00159 Blo-Chr5:1436798 2.55E-107 dispersed
Blo16g00368 Blo-Chr16:12118112 Blo04g01073 Blo-Chr4:15606691 2.70E-109 transposed
Blo01g01505 Blo-Chr1:54628306 Blo04g01073 Blo-Chr4:15606691 0 wgd
Blo12g00978 Blo-Chr12:27826943 Blo04g01073 Blo-Chr4:15606691 0 wgd
Blo16g00367 Blo-Chr16:12116155 Blo04g01073 Blo-Chr4:15606691 1.49E-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo04g01073 K21398 - qsu:112033213 838.18